Regulog IscR - Rhodobacterales
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron-sulfur cluster biogenesis; Iron homeostasis |
| Effector: | Iron-sulfur cluster redox state; Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - IscR
- By taxonomy - Rhodobacterales
- By TF family - Rrf2
- By effector - Iron-sulfur cluster redox state
- By effector - Iron ion, (Fe2+)
- By pathway - Iron-sulfur cluster biogenesis
- By pathway - Iron homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Rhodobacter sphaeroides 2.4.1 | 27 | 8 |
| Paracoccus denitrificans PD1222 | 12 | 6 |
| Jannaschia sp. CCS1 | 32 | 10 |
| Rhodobacterales bacterium HTCC2654 | 11 | 6 |
| Oceanicola granulosus HTCC2516 | 2 | 2 |
| Loktanella vestfoldensis SKA53 | 24 | 9 |
| Oceanicola batsensis HTCC2597 | 29 | 9 |
| Roseovarius nubinhibens ISM | 19 | 9 |
| Roseovarius sp. 217 | 25 | 8 |
| Sulfitobacter sp. EE-36 | 35 | 12 |
| Silicibacter TM1040 | 26 | 7 |
| Silicibacter pomeroyi DSS-3 | 10 | 5 |
| Roseobacter sp. MED193 | 39 | 8 |
| Hyphomonas neptunium ATCC 15444 | ||
| Oceanicaulis alexandrii HTCC2633 | 1 | 1 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| fbpA |
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Rhodobacter sphaeroides 2.4.1 Site: position = -20 score = 3.65642 sequence = CCTGACAAAAGAGGTCACA Site: position = -80 score = 4.50487 sequence = GTTGACTGATAGACTCAGC Gene: RSP_2913: Ferric iron ABC transporter, iron-binding protein |
Gene: Pden_4447: Ferric iron ABC transporter, iron-binding protein |
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Jannaschia sp. CCS1 Site: position = -37 score = 5.29582 sequence = CCTGACTGTTTTAGTCGGA Site: position = -94 score = 3.67154 sequence = TCAAAGTGTTTTTGTCGGA Gene: Jann_0118: Ferric iron ABC transporter, iron-binding protein |
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Rhodobacterales bacterium HTCC2654 Site: position = -52 score = 5.20592 sequence = CCTGACGAATTTAGTCAGA Gene: RB2654_04329: Ferric iron ABC transporter, iron-binding protein |
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Oceanicola granulosus HTCC2516 Site: position = -58 score = 4.89124 sequence = CCCGACCAAAATAGTCAGC Gene: OG2516_03503: Ferric iron ABC transporter, iron-binding protein |
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Loktanella vestfoldensis SKA53 Site: position = -53 score = 4.12865 sequence = CCCAAGTAAAAGAGTCGGG Site: position = -78 score = 4.84203 sequence = CCCGACTAAAATATTCAGG Gene: SKA53_05313: Ferric iron ABC transporter, iron-binding protein |
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Oceanicola batsensis HTCC2597 Site: position = -60 score = 4.85084 sequence = CCTGACCAAAATACTCGGA Gene: OB2597_04193: Ferric iron ABC transporter, iron-binding protein |
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Roseovarius nubinhibens ISM Site: position = -104 score = 5.17402 sequence = TCCGAGTATTTTAGTCGGA Site: position = -138 score = 5.36404 sequence = CTTGACTAAATTAGTCGGA Gene: ISM_05125: Ferric iron ABC transporter, iron-binding protein |
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Roseovarius sp. 217 Site: position = -38 score = 3.76266 sequence = CCCCATCAAATCACTCGGA Site: position = -70 score = 4.79254 sequence = ATTGACTCTTTTAGTCAGA Gene: ROS217_23057: Ferric iron ABC transporter, iron-binding protein |
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Sulfitobacter sp. EE-36 Site: position = -91 score = 4.36032 sequence = TCCTATTAATTCACTCAAG Site: position = -42 score = 3.69389 sequence = TCTTACTGTTTTTATAGGT Gene: EE36_05613: Ferric iron ABC transporter, iron-binding protein |
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Silicibacter TM1040 Site: position = -126 score = 4.95634 sequence = TCTGACTGAATTTATCGGA Gene: TM1040_0124: Ferric iron ABC transporter, iron-binding protein |
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Silicibacter pomeroyi DSS-3 Site: position = -50 score = 4.73337 sequence = CCCGACTGAAATAATCAGT Gene: SPO3287: Ferric iron ABC transporter, iron-binding protein |
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Roseobacter sp. MED193 Site: position = -65 score = 4.17206 sequence = ACTGACAAAAGAAGTCGGA Gene: MED193_12793: Ferric iron ABC transporter, iron-binding protein |
Gene: HNE_2693: Ferric iron ABC transporter, iron-binding protein |
Gene: OA2633_15080: Ferric iron ABC transporter, iron-binding protein |
Ferric iron ABC transporter, iron-binding protein |
| fbpC |
Gene: RSP_2539: Ferric iron ABC transporter, ATP-binding protein |
Gene: Pden_4448: Ferric iron ABC transporter, ATP-binding protein |
*
Jannaschia sp. CCS1 Site: position = -27 score = 3.98924 sequence = CCCGATTGAAAAGATCGGA Gene: Jann_1208: Ferric iron ABC transporter, ATP-binding protein |
Gene: RB2654_01465: Ferric iron ABC transporter, ATP-binding protein |
*
Oceanicola granulosus HTCC2516 Site: position = -44 score = 3.61516 sequence = CCCGAGCGAAATGTTCGGG Gene: OG2516_02803: Ferric iron ABC transporter, ATP-binding protein |
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Loktanella vestfoldensis SKA53 Site: position = -29 score = 3.62934 sequence = CCCAATTGTTTTGATCAGG Gene: SKA53_06010: Ferric iron ABC transporter, ATP-binding protein |
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Oceanicola batsensis HTCC2597 Site: position = -26 score = 4.09375 sequence = CCTTAGTAAATCCATCGGA Gene: OB2597_00425: Ferric iron ABC transporter, ATP-binding protein |
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Roseovarius nubinhibens ISM Site: position = -46 score = 4.45928 sequence = CCCGAGTGAATTGATCGGA Gene: ISM_15910: Ferric iron ABC transporter, ATP-binding protein |
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Roseovarius sp. 217 Site: position = -36 score = 4.14715 sequence = CCCGATAGATTTGATCGGA Gene: ROS217_20592: Ferric iron ABC transporter, ATP-binding protein |
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Sulfitobacter sp. EE-36 Site: position = -32 score = 4.05527 sequence = CCCGAGCGAATTGATCGGA Gene: EE36_16412: Ferric iron ABC transporter, ATP-binding protein |
Gene: TM1040_1801: Ferric iron ABC transporter, ATP-binding protein |
Gene: SPO2689: Ferric iron ABC transporter, ATP-binding protein |
Gene: MED193_06889: Ferric iron ABC transporter, ATP-binding protein |
Gene: HNE_2695: Ferric iron ABC transporter, ATP-binding protein |
Gene: OA2633_15070: Ferric iron ABC transporter, ATP-binding protein |
Ferric iron ABC transporter, ATP-binding protein |
| fbpB |
Gene: RSP_0163: Ferric iron ABC transporter, permease protein |
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*
Jannaschia sp. CCS1 Site: position = -21 score = 3.77224 sequence = CCCGACAAAAACACCAAGA Gene: Jann_0134: Ferric iron ABC transporter, permease protein |
Gene: RB2654_07676: Ferric iron ABC transporter, permease protein |
Gene: OG2516_00394: Ferric iron ABC transporter, permease protein |
*
Loktanella vestfoldensis SKA53 Site: position = -72 score = 4.64986 sequence = TCCGATCAAATAAGTCAGA Gene: SKA53_02241: Ferric iron ABC transporter, permease protein |
Gene: OB2597_05735: Ferric iron ABC transporter, permease protein |
Gene: ISM_01315: Ferric iron ABC transporter, permease protein |
Gene: ROS217_23925: Ferric iron ABC transporter, permease protein |
*
Sulfitobacter sp. EE-36 Site: position = -28 score = 5.14849 sequence = TCCGACTGAATTAGTCGAA Gene: EE36_05618: Ferric iron ABC transporter, permease protein |
*
Silicibacter TM1040 Site: position = -50 score = 3.66747 sequence = TCCGACAAAAATGCTTGAA Gene: TM1040_0122: Ferric iron ABC transporter, permease protein |
*
Silicibacter pomeroyi DSS-3 Site: position = -27 score = 4.14944 sequence = TCCGACTAAACTGGTCGAT Gene: SPO3288: Ferric iron ABC transporter, permease protein |
*
Roseobacter sp. MED193 Site: position = -58 score = 3.78678 sequence = TCCGACCAAAATGATCGCA Gene: MED193_12813: Ferric iron ABC transporter, permease protein |
Gene: HNE_2694: Ferric iron ABC transporter, permease protein |
Gene: OA2633_15075: Ferric iron ABC transporter, permease protein |
Ferric iron ABC transporter, permease protein |
| CRON 2. | ||||||||||||||||
| EE36_10454 |
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Sulfitobacter sp. EE-36 Site: position = -82 score = 4.32482 sequence = CTTGATTGTTTTTATCAGC Gene: EE36_10454: Ferrichrome-iron receptor |
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Ferrichrome-iron receptor |
| CRON 3. | ||||||||||||||||
| fhuA2 |
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Sulfitobacter sp. EE-36 Site: position = -30 score = 4.87163 sequence = TCCGACTAAAACAGTAAGG Site: position = -251 score = 3.83844 sequence = TCTTACTTTATTTATAGGG Site: position = -72 score = 3.72257 sequence = CCTTACTATTTCAGTTTGA Gene: EE36_01780: Ferrichrome-iron receptor |
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Ferrichrome-iron receptor |
| EE36_01775 |
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Gene: EE36_01775: AmpG permease |
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AmpG permease |
| mxcB2 |
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Gene: EE36_01770: Siderophore-interacting protein |
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Siderophore-interacting protein |
| CRON 4. | ||||||||||||||||
| ISM_05670 |
Gene: RSP_3056: Outer membrane receptor proteins, mostly Fe transport |
Gene: Pden_0296: Outer membrane receptor proteins, mostly Fe transport |
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*
Oceanicola batsensis HTCC2597 Site: position = -166 score = 4.70235 sequence = TCCGACTGATATAGTCACC Gene: OB2597_08064: Outer membrane receptor proteins, mostly Fe transport |
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Roseovarius nubinhibens ISM Site: position = -100 score = 4.14527 sequence = CTTGACTTTTTGCCTCAGG Gene: ISM_05670: Outer membrane receptor proteins, mostly Fe transport |
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Gene: MED193_08043: Outer membrane receptor proteins, mostly Fe transport |
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Outer membrane receptor proteins, mostly Fe transport |
| CRON 5. | ||||||||||||||||
| OB2597_05460 |
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Oceanicola batsensis HTCC2597 Site: position = -101 score = 4.16777 sequence = TCTGACGGTTTTTATCAAC Gene: OB2597_05460: TonB-dependent hemin, ferrichrome receptor |
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Roseovarius nubinhibens ISM Site: position = -117 score = 4.86648 sequence = CCTGAGTAAAAGACTCAGG Gene: ISM_00940: TonB-dependent hemin, ferrichrome receptor |
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Gene: MED193_08013: TonB-dependent hemin, ferrichrome receptor |
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TonB-dependent hemin, ferrichrome receptor |
| CRON 6. | ||||||||||||||||
| araX |
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Paracoccus denitrificans PD1222 Site: position = -81 score = 3.82017 sequence = CCAGAGTTTTTCAATCAAC Gene: Pden_1138: Iron-regulated transcriptional regulator, AraC family |
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Roseovarius sp. 217 Site: position = -165 score = 4.13969 sequence = CCTGATGTAATTTGTCAAC Gene: ROS217_22877: Iron-regulated transcriptional regulator, AraC family |
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Sulfitobacter sp. EE-36 Site: position = -113 score = 5.18449 sequence = TCCGAGTAAATTTGTCAGA Gene: EE36_08018: Iron-regulated transcriptional regulator, AraC family |
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Iron-regulated transcriptional regulator, AraC family |
| CRON 7. | ||||||||||||||||
| irpA |
Gene: RSP_1548: Iron-regulated protein A precursor |
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*
Jannaschia sp. CCS1 Site: position = -253 score = 4.74869 sequence = TCTGACAAAACAAGTCAGG Gene: Jann_1368: Iron-regulated protein A precursor |
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Rhodobacterales bacterium HTCC2654 Site: position = -25 score = 3.92748 sequence = CCCGATCACTTTACTCGGG Gene: RB2654_13154: Iron-regulated protein A precursor |
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Roseovarius nubinhibens ISM Site: position = -82 score = 4.91682 sequence = CCCGAGTATTTCACTCAGG Gene: ISM_04365: Iron-regulated protein A precursor |
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Roseovarius sp. 217 Site: position = -147 score = 4.56215 sequence = GCCTACTAAATCAGTCAAC Gene: ROS217_10107: Iron-regulated protein A precursor |
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Sulfitobacter sp. EE-36 Site: position = -140 score = 4.78764 sequence = TCTTACTAAAATTGTCGGG Gene: EE36_02713: Iron-regulated protein A precursor |
Gene: TM1040_2199: Iron-regulated protein A precursor |
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Silicibacter pomeroyi DSS-3 Site: position = -88 score = 5.17529 sequence = ACTGACAAATTTAGTCAGA Gene: SPO0086: Iron-regulated protein A precursor |
Gene: MED193_19664: Iron-regulated protein A precursor |
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Iron-regulated protein A precursor |
| hmuX |
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Gene: ROS217_10102: hypothetical porin |
Gene: EE36_02708: hypothetical porin |
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Gene: SPO0087: hypothetical porin |
Gene: MED193_19659: hypothetical porin |
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hypothetical porin |
| COG3488 |
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Rhodobacter sphaeroides 2.4.1 Site: position = -56 score = 4.44905 sequence = TCCGATTGAAAGACTCGGG Gene: RSP_1545: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites |
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Gene: Jann_1369: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites |
Gene: RB2654_13134: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites |
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Gene: ISM_04360: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites |
Gene: ROS217_10097: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites |
Gene: EE36_02703: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites |
Gene: TM1040_2202: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites |
Gene: SPO0088: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites |
Gene: MED193_19644: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites |
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Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites |
| COG3489 |
Gene: RSP_1544: Predicted periplasmic lipoprotein |
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Gene: Jann_1370: Predicted periplasmic lipoprotein |
Gene: RB2654_13129: Predicted periplasmic lipoprotein |
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Gene: ISM_04355: Predicted periplasmic lipoprotein |
Gene: ROS217_10092: Predicted periplasmic lipoprotein |
Gene: EE36_02698: Predicted periplasmic lipoprotein |
Gene: TM1040_2203: Predicted periplasmic lipoprotein |
Gene: SPO0089: Predicted periplasmic lipoprotein |
Gene: MED193_19639: Predicted periplasmic lipoprotein |
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Predicted periplasmic lipoprotein |
| COG3490 |
Gene: RSP_1543: Uncharacterised conserved protein UCP028101 |
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Gene: Jann_1371: Uncharacterised conserved protein UCP028101 |
Gene: RB2654_13124: Uncharacterised conserved protein UCP028101 |
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Gene: ISM_04350: Uncharacterised conserved protein UCP028101 |
Gene: ROS217_10087: Uncharacterised conserved protein UCP028101 |
Gene: EE36_02693: Uncharacterised conserved protein UCP028101 |
Gene: TM1040_2204: Uncharacterised conserved protein UCP028101 |
Gene: SPO0090: Uncharacterised conserved protein UCP028101 |
Gene: MED193_19634: Uncharacterised conserved protein UCP028101 |
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Uncharacterised conserved protein UCP028101 |
| bfd |
Gene: RSP_1547: Bacterioferritin-associated ferredoxin |
Gene: Pden_0615: Bacterioferritin-associated ferredoxin |
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Gene: RB2654_13144: Bacterioferritin-associated ferredoxin |
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Gene: OB2597_06820: Bacterioferritin-associated ferredoxin |
Gene: ISM_00995: Bacterioferritin-associated ferredoxin |
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Silicibacter TM1040 Site: position = -103 score = 4.09226 sequence = CCTGATCAAAACAGTCCGA Site: position = -71 score = 4.16035 sequence = GCTTATTCTTTTACTCGGA Gene: TM1040_2200: Bacterioferritin-associated ferredoxin |
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Roseobacter sp. MED193 Site: position = -103 score = 4.35696 sequence = CCTGACAAAAACAATAAGC Site: position = -72 score = 4.49226 sequence = CCTTATTGTTTTTGTCAGA Gene: MED193_19654: Bacterioferritin-associated ferredoxin |
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Bacterioferritin-associated ferredoxin |
| bfr |
Gene: RSP_1546: Bacterioferritin (cytochrome b1) |
Gene: Pden_0616: Bacterioferritin (cytochrome b1) |
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Gene: RB2654_13139: Bacterioferritin (cytochrome b1) |
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Gene: OB2597_06815: Bacterioferritin (cytochrome b1) |
Gene: ISM_00990: Bacterioferritin (cytochrome b1) |
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Gene: TM1040_2201: Bacterioferritin (cytochrome b1) |
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Gene: MED193_19649: Bacterioferritin (cytochrome b1) |
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Bacterioferritin (cytochrome b1) |
| MED193_19679 |
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Roseobacter sp. MED193 Site: position = -118 score = 5.34791 sequence = TCTGACAAAAATAGTCAGA Site: position = -91 score = 4.6512 sequence = CTTGATTGTTTTAATCAGG Gene: MED193_19679: hypothetical protein |
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hypothetical protein |
| hemP |
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Rhodobacter sphaeroides 2.4.1 Site: position = -228 score = 3.92817 sequence = ACCGACCGAAAGAATCAGC Site: position = -200 score = 4.68835 sequence = TCCGACTGATTCAGTCACC Gene: RSP_6006: Hemin uptake protein HemP |
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Paracoccus denitrificans PD1222 Site: position = -53 score = 4.27888 sequence = TCCTAGGAAATTTGTCAGG Gene: Pden_4141: Hemin uptake protein HemP |
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Jannaschia sp. CCS1 Site: position = -259 score = 4.41861 sequence = GCATACTATTTTAGTCAGG Site: position = -287 score = 5.18761 sequence = TCTGAGTAAAATACTCAGG Gene: Jann_3275: Hemin uptake protein HemP |
Gene: RB2654_08842: Hemin uptake protein HemP |
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*2
Loktanella vestfoldensis SKA53 Site: position = -43 score = 5.07979 sequence = CCTGACTAAAAAACTCAGG Gene: SKA53_14131: Hemin uptake protein HemP Site: position = -47 score = 4.80878 sequence = GCTGACAGAAATAATCAGA Gene: SKA53_06267: Hemin uptake protein HemP |
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Roseovarius nubinhibens ISM Site: position = -205 score = 5.20227 sequence = TCTGACTAAAAAAGTCGGA Site: position = -178 score = 4.8089 sequence = TCTGACAGAATAAATCAGA Gene: ISM_01000: Hemin uptake protein HemP |
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Roseovarius sp. 217 Site: position = -152 score = 4.2224 sequence = TCTGATCAAAAGAATCGGA Site: position = -124 score = 4.7105 sequence = CCTTATTAATTAAGTCAGA Gene: ROS217_23865: Hemin uptake protein HemP |
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Sulfitobacter sp. EE-36 Site: position = -274 score = 4.99629 sequence = TCCGACTAAAACTGTCGGA Site: position = -247 score = 4.08707 sequence = CCCTATAATTTCAATCAGG Gene: EE36_10464: Hemin uptake protein HemP |
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Silicibacter TM1040 Site: position = -258 score = 4.73069 sequence = TCTGACCAAATAAATCAGG Gene: TM1040_2198: Hemin uptake protein HemP |
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Silicibacter pomeroyi DSS-3 Site: position = -99 score = 4.59075 sequence = GGCGACAAAAATAGTCAGG Gene: SPO0789: Hemin uptake protein HemP |
Gene: MED193_19674: Hemin uptake protein HemP |
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Hemin uptake protein HemP |
| MED193_19669 |
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Gene: MED193_19669: hypothetical protein |
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hypothetical protein |
| RB2654_08837 |
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Gene: RB2654_08837: hypothetical protein |
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Gene: SKA53_14126: hypothetical protein |
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Oceanicola batsensis HTCC2597 Site: position = -125 score = 4.07191 sequence = GTTGATCGAAAAAGTCGGA Site: position = -97 score = 4.3382 sequence = GGTGAGCAAAATAGTCAGG Gene: OB2597_06825: hypothetical protein |
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Gene: ROS217_23860: hypothetical protein |
Gene: EE36_10459: hypothetical protein |
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Gene: SPO0790: hypothetical protein |
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hypothetical protein |
| RB2654_08847 |
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Rhodobacterales bacterium HTCC2654 Site: position = -91 score = 5.22546 sequence = TCCGACTGAATTTGTCAGA Gene: RB2654_08847: hypothetical protein |
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hypothetical protein |
| CRON 8. | ||||||||||||||||
| fhuA |
Gene: RSP_1440: Ferric hydroxamate outer membrane receptor FhuA |
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Paracoccus denitrificans PD1222 Site: position = 24 score = 4.28409 sequence = CCTGAGTTAATAGCTCGGA Gene: Pden_1139: Ferric hydroxamate outer membrane receptor FhuA |
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Roseovarius sp. 217 Site: position = -30 score = 4.70545 sequence = CCTGAGTTAAAGAGTCGGA Gene: ROS217_22882: Ferric hydroxamate outer membrane receptor FhuA |
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Sulfitobacter sp. EE-36 Site: position = -44 score = 4.55755 sequence = ACTGAGTTAAATACTCGGA Gene: EE36_08023: Ferric hydroxamate outer membrane receptor FhuA |
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Ferric hydroxamate outer membrane receptor FhuA |
| fhuD |
Gene: RSP_1439: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD |
Gene: Pden_1140: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD |
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Gene: ROS217_22887: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD |
Gene: EE36_08028: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD |
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Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD |
| fhuB |
Gene: RSP_1438: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB |
Gene: Pden_1141: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB |
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Gene: ROS217_22892: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB |
Gene: EE36_08033: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB |
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Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB |
| fhuC |
Gene: RSP_1437: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC |
Gene: Pden_1142: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC |
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Gene: ROS217_22897: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC |
Gene: EE36_08038: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC |
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Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC |
| CRON 9. | ||||||||||||||||
| hmuR |
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Paracoccus denitrificans PD1222 Site: position = -89 score = 4.13275 sequence = ATTGACAGTTTTACTAAGA Gene: Pden_4201: TonB-dependent hemin , ferrichrome receptor |
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Jannaschia sp. CCS1 Site: position = -144 score = 4.38834 sequence = GTTGACGCTTTTAGTCGGA Gene: Jann_2132: TonB-dependent hemin , ferrichrome receptor |
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Rhodobacterales bacterium HTCC2654 Site: position = -112 score = 4.62963 sequence = GTTGACTAAATTACTAAGC Gene: RB2654_15781: TonB-dependent hemin , ferrichrome receptor |
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Loktanella vestfoldensis SKA53 Site: position = -113 score = 4.59639 sequence = CTTGACTGTTTGTGTCGGA Gene: SKA53_06417: TonB-dependent hemin , ferrichrome receptor |
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Roseovarius nubinhibens ISM Site: position = -157 score = 4.43746 sequence = CTTGACAGTTTTAGTCTGA Gene: ISM_04235: TonB-dependent hemin , ferrichrome receptor |
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Roseovarius sp. 217 Site: position = -198 score = 4.35697 sequence = CTTGACTCTTTTACTCATA Gene: ROS217_17442: TonB-dependent hemin , ferrichrome receptor |
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Sulfitobacter sp. EE-36 Site: position = -256 score = 4.33009 sequence = GTTGACACTTTTAGTCGGT Gene: EE36_01535: TonB-dependent hemin , ferrichrome receptor |
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Silicibacter TM1040 Site: position = -143 score = 3.9452 sequence = CTTGACAGATTTAATAAAT Gene: TM1040_0347: TonB-dependent hemin , ferrichrome receptor |
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Roseobacter sp. MED193 Site: position = 69 score = 4.00046 sequence = GTTGACTGTTTTTATCACC Gene: MED193_17504: TonB-dependent hemin , ferrichrome receptor |
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TonB-dependent hemin , ferrichrome receptor |
| Mlr1156 |
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Gene: Jann_2131: Mlr1156 protein |
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Gene: SKA53_06412: Mlr1156 protein |
Gene: OB2597_05430: Mlr1156 protein |
*
Roseovarius nubinhibens ISM Site: position = -132 score = 4.03831 sequence = TCCGACTATTTCATTTAGG Gene: ISM_04265: Mlr1156 protein |
Gene: ROS217_22867: Mlr1156 protein |
*
Sulfitobacter sp. EE-36 Site: position = -167 score = 4.43603 sequence = GTTGATTGTTAAAGTCAGG Gene: EE36_12993: Mlr1156 protein |
Gene: TM1040_0348: Mlr1156 protein |
|
Gene: MED193_17509: Mlr1156 protein |
|
|
Mlr1156 protein |
| exbB |
|
|
Gene: Jann_2130: Ferric siderophore transport system, biopolymer transport protein ExbB |
|
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Gene: SKA53_06407: Ferric siderophore transport system, biopolymer transport protein ExbB |
Gene: OB2597_05435: Ferric siderophore transport system, biopolymer transport protein ExbB |
Gene: ISM_04260: Ferric siderophore transport system, biopolymer transport protein ExbB |
Gene: ROS217_22862: Ferric siderophore transport system, biopolymer transport protein ExbB |
Gene: EE36_12998: Ferric siderophore transport system, biopolymer transport protein ExbB |
Gene: TM1040_0349: Ferric siderophore transport system, biopolymer transport protein ExbB |
|
Gene: MED193_17514: Ferric siderophore transport system, biopolymer transport protein ExbB |
|
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Ferric siderophore transport system, biopolymer transport protein ExbB |
| exbD1 |
|
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Gene: Jann_2129: Ferric siderophore transport system, periplasmic binding protein ExbD |
|
|
Gene: SKA53_06402: Ferric siderophore transport system, periplasmic binding protein ExbD |
Gene: OB2597_05440: Ferric siderophore transport system, periplasmic binding protein ExbD |
Gene: ISM_04255: Ferric siderophore transport system, periplasmic binding protein ExbD |
Gene: ROS217_22857: Ferric siderophore transport system, periplasmic binding protein ExbD |
Gene: EE36_13003: Ferric siderophore transport system, periplasmic binding protein ExbD |
Gene: TM1040_0350: Ferric siderophore transport system, periplasmic binding protein ExbD |
|
Gene: MED193_17519: Ferric siderophore transport system, periplasmic binding protein ExbD |
|
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Ferric siderophore transport system, periplasmic binding protein ExbD |
| exbD2 |
|
|
Gene: Jann_2128: Ferric siderophore transport system, periplasmic binding protein ExbD |
|
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Gene: SKA53_06397: Ferric siderophore transport system, periplasmic binding protein ExbD |
Gene: OB2597_05445: Ferric siderophore transport system, periplasmic binding protein ExbD |
Gene: ISM_04250: Ferric siderophore transport system, periplasmic binding protein ExbD |
Gene: ROS217_22852: Ferric siderophore transport system, periplasmic binding protein ExbD |
Gene: EE36_13008: Ferric siderophore transport system, periplasmic binding protein ExbD |
Gene: TM1040_0351: Ferric siderophore transport system, periplasmic binding protein ExbD |
|
Gene: MED193_17524: Ferric siderophore transport system, periplasmic binding protein ExbD |
|
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Ferric siderophore transport system, periplasmic binding protein ExbD |
| tonB |
|
|
Gene: Jann_2127: Ferric siderophore transport system, periplasmic binding protein TonB |
|
|
Gene: SKA53_06392: Ferric siderophore transport system, periplasmic binding protein TonB |
Gene: OB2597_05450: Ferric siderophore transport system, periplasmic binding protein TonB |
Gene: ISM_04245: Ferric siderophore transport system, periplasmic binding protein TonB |
Gene: ROS217_22847: Ferric siderophore transport system, periplasmic binding protein TonB |
Gene: EE36_13013: Ferric siderophore transport system, periplasmic binding protein TonB |
Gene: TM1040_0352: Ferric siderophore transport system, periplasmic binding protein TonB |
|
Gene: MED193_17529: Ferric siderophore transport system, periplasmic binding protein TonB |
|
|
Ferric siderophore transport system, periplasmic binding protein TonB |
| hemP |
|
|
|
|
|
|
*
Oceanicola batsensis HTCC2597 Site: position = -192 score = 4.69091 sequence = CTTGACTAATTTGATCGGA Site: position = -149 score = 3.86438 sequence = TCCGAGTCGAATGCTCGGA Gene: OB2597_05425: Hemin uptake protein HemP |
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|
Hemin uptake protein HemP |
| CRON 10. | ||||||||||||||||
| SKA53_15391 |
|
|
|
|
|
Gene: SKA53_15391: hypothetical protein |
|
*
Roseovarius nubinhibens ISM Site: position = -81 score = 4.94595 sequence = TCCGACTCTTTTTGTCAGA Gene: ISM_15940: hypothetical protein |
|
|
|
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|
|
hypothetical protein |
| TM1040_2633 |
|
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Gene: ISM_15945: hypothetical protein |
|
|
*
Silicibacter TM1040 Site: position = -116 score = 4.5035 sequence = TCCGACAAAAATACTAGGG Gene: TM1040_2633: hypothetical protein |
|
*
Roseobacter sp. MED193 Site: position = -139 score = 5.34791 sequence = TCTGACTATTTTTGTCAGA Gene: MED193_15812: hypothetical protein |
|
|
hypothetical protein |
| SKA53_15396 |
|
|
|
|
|
*
Loktanella vestfoldensis SKA53 Site: position = -45 score = 4.76766 sequence = CCTGATTATTTATGTCAGG Gene: SKA53_15396: hypothetical protein |
|
|
|
|
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|
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|
hypothetical protein |
| CRON 11. | ||||||||||||||||
| exbB |
*
Rhodobacter sphaeroides 2.4.1 Site: position = -134 score = 4.01655 sequence = CTTGACTGTTTTCGTAAAC Gene: RSP_0920: Biopolymer transport protein, ExbB |
Gene: Pden_0727: Biopolymer transport protein, ExbB |
|
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Biopolymer transport protein, ExbB |
| exbD |
Gene: RSP_0921: Biopolymer transport protein ExbD/TolR |
Gene: Pden_0726: Biopolymer transport protein ExbD/TolR |
|
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Biopolymer transport protein ExbD/TolR |
| tonB |
Gene: RSP_0922: Ferric siderophore transport system, periplasmic binding protein TonB |
Gene: Pden_0725: Ferric siderophore transport system, periplasmic binding protein TonB |
|
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Ferric siderophore transport system, periplasmic binding protein TonB |
| CRON 12. | ||||||||||||||||
| fecI |
*
Rhodobacter sphaeroides 2.4.1 Site: position = -70 score = 4.25368 sequence = GCCGAGCGATATTGTCGGG Gene: RSP_4275: RNA polymerase sigma-70 factor, ECF subfamily |
Gene: Pden_1629: RNA polymerase sigma-70 factor, ECF subfamily |
|
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RNA polymerase sigma-70 factor, ECF subfamily |
| fecR |
Gene: RSP_4274: FecR protein |
Gene: Pden_1630: FecR protein |
|
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FecR protein |
| fhuA |
Gene: RSP_4273: TonB-dependent receptor protein |
Gene: Pden_1631: TonB-dependent receptor protein |
|
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TonB-dependent receptor protein |
| fhuD |
Gene: RSP_4272: ABC cobalamin/Fe3+-siderophore transporter, periplasmic ligand binding protein |
|
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ABC cobalamin/Fe3+-siderophore transporter, periplasmic ligand binding protein |
| fhuB |
Gene: RSP_4271: ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit |
|
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ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit |
| fhuC |
Gene: RSP_7397: Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC |
|
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Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC |
| CRON 13. | ||||||||||||||||
| fecB |
*
Rhodobacter sphaeroides 2.4.1 Site: position = -142 score = 4.55986 sequence = TCCGACTGTTCTTGTCGGA Gene: RSP_3416: ABC-type Fe3+-hydroxamate transport system, periplasmic component |
*
Paracoccus denitrificans PD1222 Site: position = -128 score = 4.14418 sequence = TCCTATTCTTTTTGTCGGA Gene: Pden_3522: ABC-type Fe3+-hydroxamate transport system, periplasmic component |
*
Jannaschia sp. CCS1 Site: position = -36 score = 5.0684 sequence = TCTGACTAAAATACTCAAC Site: position = -61 score = 4.38127 sequence = TCTAACTATTTCTGTCAGC Gene: Jann_2122: ABC-type Fe3+-hydroxamate transport system, periplasmic component |
*
Rhodobacterales bacterium HTCC2654 Site: position = -67 score = 4.93599 sequence = CCCGACTGATTTAGTCAAT Site: position = -34 score = 4.69052 sequence = TCCGACTGAAACACTCAAC Gene: RB2654_09494: ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|
|
*
Oceanicola batsensis HTCC2597 Site: position = -123 score = 3.83205 sequence = CCCGCCCAAAACTGTCGGG Site: position = -154 score = 4.2224 sequence = ATCGACTGTTTTTGTCGGT Gene: OB2597_09404: ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|
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*
Roseobacter sp. MED193 Site: position = -355 score = 4.01213 sequence = CTTGACAAAACCTGTAAGG Gene: MED193_22076: ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|
|
ABC-type Fe3+-hydroxamate transport system, periplasmic component |
| fecC |
Gene: RSP_3415: ABC-type Fe3+-siderophore transport system, permease component |
Gene: Pden_3523: ABC-type Fe3+-siderophore transport system, permease component |
*
Jannaschia sp. CCS1 Site: position = -59 score = 5.0684 sequence = GTTGAGTATTTTAGTCAGA Site: position = -34 score = 4.38127 sequence = GCTGACAGAAATAGTTAGA Gene: Jann_2123: ABC-type Fe3+-siderophore transport system, permease component |
*
Rhodobacterales bacterium HTCC2654 Site: position = -87 score = 4.69052 sequence = GTTGAGTGTTTCAGTCGGA Site: position = -54 score = 4.93599 sequence = ATTGACTAAATCAGTCGGG Gene: RB2654_09499: ABC-type Fe3+-siderophore transport system, permease component |
|
|
Gene: OB2597_09399: ABC-type Fe3+-siderophore transport system, permease component |
|
|
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Gene: MED193_22071: ABC-type Fe3+-siderophore transport system, permease component |
|
|
ABC-type Fe3+-siderophore transport system, permease component |
| fecD |
Gene: RSP_3414: ABC-type Fe3+-siderophore transport system, permease component |
Gene: Pden_3524: ABC-type Fe3+-siderophore transport system, permease component |
Gene: Jann_2124: ABC-type Fe3+-siderophore transport system, permease component |
Gene: RB2654_09504: ABC-type Fe3+-siderophore transport system, permease component |
|
|
Gene: OB2597_09394: ABC-type Fe3+-siderophore transport system, permease component |
|
|
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Gene: MED193_22066: ABC-type Fe3+-siderophore transport system, permease component |
|
|
ABC-type Fe3+-siderophore transport system, permease component |
| fecE |
Gene: RSP_3413: ABC Fe+3-siderophore transporter, ATPase subunit |
Gene: Pden_3525: ABC Fe+3-siderophore transporter, ATPase subunit |
Gene: Jann_2125: ABC Fe+3-siderophore transporter, ATPase subunit |
Gene: RB2654_09509: ABC Fe+3-siderophore transporter, ATPase subunit |
|
|
Gene: OB2597_09389: ABC Fe+3-siderophore transporter, ATPase subunit |
|
|
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Gene: MED193_22061: ABC Fe+3-siderophore transporter, ATPase subunit |
|
|
ABC Fe+3-siderophore transporter, ATPase subunit |
| mxcB |
|
|
|
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|
|
Gene: OB2597_09384: Siderophore-interacting protein |
|
|
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Gene: MED193_22056: Siderophore-interacting protein |
|
|
Siderophore-interacting protein |
| exbB |
|
|
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Gene: MED193_22051: Ferric siderophore transport system, biopolymer transport protein ExbB |
|
|
Ferric siderophore transport system, biopolymer transport protein ExbB |
| exbD1 |
|
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Gene: MED193_22046: Biopolymer transport protein ExbD/TolR |
|
|
Biopolymer transport protein ExbD/TolR |
| exbD2 |
|
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|
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Gene: MED193_22041: Biopolymer transport protein ExbD/TolR |
|
|
Biopolymer transport protein ExbD/TolR |
| tonB |
|
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Gene: MED193_22036: Ferric siderophore transport system, periplasmic binding protein TonB |
|
|
Ferric siderophore transport system, periplasmic binding protein TonB |
| CRON 14. | ||||||||||||||||
| RSP_3417 |
*
Rhodobacter sphaeroides 2.4.1 Site: position = -204 score = 4.55986 sequence = TCCGACAAGAACAGTCGGA Gene: RSP_3417: Ferrichrome-iron receptor |
*
Paracoccus denitrificans PD1222 Site: position = -164 score = 4.14418 sequence = TCCGACAAAAAGAATAGGA Gene: Pden_3521: Ferrichrome-iron receptor |
|
|
|
|
*
Oceanicola batsensis HTCC2597 Site: position = -390 score = 4.36639 sequence = CATGATTGTTTCAGTCGGA Site: position = -318 score = 3.83205 sequence = CCCGACAGTTTTGGGCGGG Site: position = -287 score = 4.2224 sequence = ACCGACAAAAACAGTCGAT Gene: OB2597_09409: Ferrichrome-iron receptor |
|
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Ferrichrome-iron receptor |
| CRON 15. | ||||||||||||||||
| iscR |
*
Rhodobacter sphaeroides 2.4.1 Site: position = -119 score = 4.3102 sequence = CTTGACAAAAACGCTCGGA Gene: RSP_0443: Iron-sulfur cluster regulator IscR, Rrf2 family |
Gene: Pden_2958: Iron-sulfur cluster regulator IscR, Rrf2 family |
*
Jannaschia sp. CCS1 Site: position = -127 score = 3.03027 sequence = GATTCCAAATTGTGTCGGG Gene: Jann_2366: Iron-sulfur cluster regulator IscR, Rrf2 family |
Gene: RB2654_04009: Iron-sulfur cluster regulator IscR, Rrf2 family |
Gene: OG2516_03700: Iron-sulfur cluster regulator IscR, Rrf2 family |
*
Loktanella vestfoldensis SKA53 Site: position = -131 score = 4.24783 sequence = CTTGACGAAAACTATCAGG Gene: SKA53_05183: Iron-sulfur cluster regulator IscR, Rrf2 family |
*
Oceanicola batsensis HTCC2597 Site: position = -134 score = 3.76096 sequence = CTTGACGACTTTGGTCAAG Gene: OB2597_03589: Iron-sulfur cluster regulator IscR, Rrf2 family |
Gene: ISM_16015: Iron-sulfur cluster regulator IscR, Rrf2 family |
*
Roseovarius sp. 217 Site: position = -120 score = 3.52932 sequence = CTTGACGACTTCGCTCGGG Gene: ROS217_20542: Iron-sulfur cluster regulator IscR, Rrf2 family |
*
Sulfitobacter sp. EE-36 Site: position = -136 score = 3.63634 sequence = GTTGACGAATTCGCTAGGG Gene: EE36_14302: Iron-sulfur cluster regulator IscR, Rrf2 family |
*
Silicibacter TM1040 Site: position = -137 score = 3.86437 sequence = CTTGACGAATTTTATCCGG Gene: TM1040_1240: Iron-sulfur cluster regulator IscR, Rrf2 family |
*
Silicibacter pomeroyi DSS-3 Site: position = -141 score = 4.11843 sequence = CTTGACGAATTCCCTCGGG Gene: SPO2025: Iron-sulfur cluster regulator IscR, Rrf2 family |
*
Roseobacter sp. MED193 Site: position = -144 score = 4.02578 sequence = CTTGACGAATTCCATCAGC Gene: MED193_04321: Iron-sulfur cluster regulator IscR, Rrf2 family |
|
Gene: OA2633_03246: Iron-sulfur cluster regulator IscR, Rrf2 family |
Iron-sulfur cluster regulator IscR, Rrf2 family |
| iscS |
Gene: RSP_0442: Cysteine desulfurase (EC 2.8.1.7) |
Gene: Pden_3963: Cysteine desulfurase (EC 2.8.1.7) |
Gene: Jann_2365: Cysteine desulfurase (EC 2.8.1.7) |
Gene: RB2654_04004: Cysteine desulfurase (EC 2.8.1.7) |
Gene: OG2516_03695: Cysteine desulfurase (EC 2.8.1.7) |
Gene: SKA53_05178: Cysteine desulfurase (EC 2.8.1.7) |
Gene: OB2597_03584: Cysteine desulfurase (EC 2.8.1.7) |
Gene: ISM_16010: Cysteine desulfurase (EC 2.8.1.7) |
Gene: ROS217_20537: Cysteine desulfurase (EC 2.8.1.7) |
Gene: EE36_14307: Cysteine desulfurase (EC 2.8.1.7) |
Gene: TM1040_1241: Cysteine desulfurase (EC 2.8.1.7) |
|
Gene: MED193_04316: Cysteine desulfurase (EC 2.8.1.7) |
Gene: HNE_2620: Cysteine desulfurase (EC 2.8.1.7) |
Gene: OA2633_03241: Cysteine desulfurase (EC 2.8.1.7) |
Cysteine desulfurase (EC 2.8.1.7) |
| sufB |
Gene: RSP_0440: Iron-sulfur cluster assembly protein SufB |
Gene: Pden_3964: Iron-sulfur cluster assembly protein SufB |
Gene: Jann_2364: Iron-sulfur cluster assembly protein SufB |
Gene: RB2654_03999: Iron-sulfur cluster assembly protein SufB |
Gene: OG2516_03690: Iron-sulfur cluster assembly protein SufB |
Gene: SKA53_05173: Iron-sulfur cluster assembly protein SufB |
Gene: OB2597_03579: Iron-sulfur cluster assembly protein SufB |
Gene: ISM_16005: Iron-sulfur cluster assembly protein SufB |
Gene: ROS217_20532: Iron-sulfur cluster assembly protein SufB |
Gene: EE36_14312: Iron-sulfur cluster assembly protein SufB |
Gene: TM1040_1242: Iron-sulfur cluster assembly protein SufB |
Gene: SPO2023: Iron-sulfur cluster assembly protein SufB |
Gene: MED193_04311: Iron-sulfur cluster assembly protein SufB |
Gene: HNE_2619: Iron-sulfur cluster assembly protein SufB |
Gene: OA2633_03236: Iron-sulfur cluster assembly protein SufB |
Iron-sulfur cluster assembly protein SufB |
| Jann_2362 |
|
|
2
Jannaschia sp. CCS1 Gene: Jann_2363: SAM-dependent methyltransferases Gene: Jann_2362: SAM-dependent methyltransferases |
|
Gene: OG2516_03685: SAM-dependent methyltransferases |
|
|
Gene: ISM_15985: SAM-dependent methyltransferases |
|
|
Gene: TM1040_1244: SAM-dependent methyltransferases |
Gene: SPO2020: SAM-dependent methyltransferases |
|
|
|
SAM-dependent methyltransferases |
| Jann_2361 |
|
|
Gene: Jann_2361: ExoV domain protein |
|
|
|
|
|
|
Gene: EE36_14322: ExoV domain protein |
|
Gene: SPO2019: ExoV domain protein |
Gene: MED193_04296: ExoV domain protein |
|
|
ExoV domain protein |
| Jann_2360 |
|
|
Gene: Jann_2360: Methyltransferase FkbM |
|
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|
|
Methyltransferase FkbM |
| sufC |
Gene: RSP_0437: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: Pden_3966: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: Jann_2359: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: RB2654_03994: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: OG2516_03675: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: SKA53_05168: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: OB2597_03564: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: ISM_15975: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: ROS217_20517: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: EE36_14327: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: TM1040_1245: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: SPO2018: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: MED193_04291: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: HNE_2616: Iron-sulfur cluster assembly ATPase protein SufC |
Gene: OA2633_03226: Iron-sulfur cluster assembly ATPase protein SufC |
Iron-sulfur cluster assembly ATPase protein SufC |
| sufD |
|
Gene: Pden_3967: Iron-sulfur cluster assembly protein SufD |
Gene: Jann_2358: Iron-sulfur cluster assembly protein SufD |
Gene: RB2654_03989: Iron-sulfur cluster assembly protein SufD |
Gene: OG2516_03670: Iron-sulfur cluster assembly protein SufD |
Gene: SKA53_05163: Iron-sulfur cluster assembly protein SufD |
Gene: OB2597_03559: Iron-sulfur cluster assembly protein SufD |
Gene: ISM_15970: Iron-sulfur cluster assembly protein SufD |
Gene: ROS217_20512: Iron-sulfur cluster assembly protein SufD |
Gene: EE36_14332: Iron-sulfur cluster assembly protein SufD |
Gene: TM1040_1246: Iron-sulfur cluster assembly protein SufD |
Gene: SPO2017: Iron-sulfur cluster assembly protein SufD |
Gene: MED193_04286: Iron-sulfur cluster assembly protein SufD |
Gene: HNE_2615: Iron-sulfur cluster assembly protein SufD |
Gene: OA2633_03221: Iron-sulfur cluster assembly protein SufD |
Iron-sulfur cluster assembly protein SufD |
| RSP_0433 |
Gene: RSP_0433: hypothetical protein |
Gene: Pden_3968: hypothetical protein |
Gene: Jann_2357: hypothetical protein |
Gene: RB2654_03984: hypothetical protein |
Gene: OG2516_03665: hypothetical protein |
Gene: SKA53_05158: hypothetical protein |
Gene: OB2597_03554: hypothetical protein |
Gene: ISM_15965: hypothetical protein |
Gene: ROS217_20507: hypothetical protein |
Gene: EE36_14337: hypothetical protein |
Gene: TM1040_1247: hypothetical protein |
Gene: SPO2016: hypothetical protein |
Gene: MED193_04281: hypothetical protein |
|
|
hypothetical protein |
| RSP_0432 |
Gene: RSP_0432: hypothetical protein |
Gene: Pden_3969: hypothetical protein |
Gene: Jann_2356: hypothetical protein |
Gene: RB2654_03979: hypothetical protein |
Gene: OG2516_03660: hypothetical protein |
Gene: SKA53_05153: hypothetical protein |
Gene: OB2597_03549: hypothetical protein |
Gene: ISM_15960: hypothetical protein |
Gene: ROS217_20502: hypothetical protein |
Gene: EE36_14342: hypothetical protein |
Gene: TM1040_1248: hypothetical protein |
Gene: SPO2015: hypothetical protein |
Gene: MED193_04276: hypothetical protein |
|
|
hypothetical protein |
| sufS |
Gene: RSP_0431: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: Pden_3970: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: Jann_2355: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: RB2654_03974: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: OG2516_03655: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: SKA53_05148: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: OB2597_03544: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: ISM_15955: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: ROS217_20497: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: EE36_14347: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: TM1040_1249: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: SPO2014: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: MED193_04271: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: HNE_2614: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: OA2633_03216: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
| MED193_04306 |
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Gene: MED193_04306: hypothetical protein |
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hypothetical protein |
| RSP_0439 |
Gene: RSP_0439: protein of unknown function DUF74 |
Gene: Pden_3965: protein of unknown function DUF74 |
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Gene: OB2597_03574: protein of unknown function DUF74 |
Gene: ISM_16000: protein of unknown function DUF74 |
Gene: ROS217_20527: protein of unknown function DUF74 |
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Gene: TM1040_1243: protein of unknown function DUF74 |
Gene: SPO2021: protein of unknown function DUF74 |
Gene: MED193_04301: protein of unknown function DUF74 |
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protein of unknown function DUF74 |
| OG2516_03680 |
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Gene: OG2516_03680: hypothetical protein |
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Gene: OB2597_03569: hypothetical protein |
Gene: ISM_15980: hypothetical protein |
Gene: ROS217_20522: hypothetical protein |
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Gene: SPO2022: hypothetical protein |
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hypothetical protein |
| EE36_14317 |
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Gene: EE36_14317: hypothetical protein |
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hypothetical protein |
| CRON 16. | ||||||||||||||||
| SKA53_06277 |
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Loktanella vestfoldensis SKA53 Site: position = -33 score = 5.07654 sequence = GCTGACTATATTTGTCGGG Gene: SKA53_06277: hypothetical protein |
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hypothetical protein |
| dps |
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Gene: Jann_3276: DNA-binding ferritin-like protein (oxidative damage protectant) |
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Gene: SKA53_06272: DNA-binding ferritin-like protein (oxidative damage protectant) |
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Gene: TM1040_2721: DNA-binding ferritin-like protein (oxidative damage protectant) |
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Gene: HNE_2969: DNA-binding ferritin-like protein (oxidative damage protectant) |
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Oceanicaulis alexandrii HTCC2633 Site: position = -247 score = 4.08931 sequence = TCCGTGTGTATCAATCAGG Gene: OA2633_03081: DNA-binding ferritin-like protein (oxidative damage protectant) |
DNA-binding ferritin-like protein (oxidative damage protectant) |
| Jann_3277 |
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Jannaschia sp. CCS1 Site: position = -31 score = 4.83805 sequence = CCTGAGTAATACACTCAAG Gene: Jann_3277: hypothetical protein |
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hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |