Regulon of IscR in Rhodobacterales bacterium HTCC2654

Properties
Regulator type:	Transcription factor
TF locus tag:	RB2654_04009
Regulator family:	Rrf2
Regulation mode:	repressor (activator)
Biological process:	Iron-sulfur cluster biogenesis; Iron homeostasis
Effector:	Iron-sulfur cluster redox state; Iron ion, (Fe2+)
Regulog:	IscR - Rhodobacterales
Statistics of regulated genes:
- Genes	11
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 125 sites [see more]

Member of regulog collections

By trascription factor - IscR
By taxonomy - Rhodobacterales
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By effector - Iron ion, (Fe2+)
By pathway - Iron-sulfur cluster biogenesis
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -112 Score: 4.6 Sequence: GTTGACTAAATTACTAAGC Locus tag: RB2654_15781 Name: hmuR Funciton: TonB-dependent hemin , ferrichrome receptor
	RB2654_15781	hmuR	TonB-dependent hemin , ferrichrome receptor
Position: -87 Score: 4.7 Sequence: GTTGAGTGTTTCAGTCGGA Position: -54 Score: 4.9 Sequence: ATTGACTAAATCAGTCGGG Locus tag: RB2654_09499 Name: fecC Funciton: ABC-type Fe3+-siderophore transport system, permease component Locus tag: RB2654_09504 Name: fecD Funciton: ABC-type Fe3+-siderophore transport system, permease component Locus tag: RB2654_09509 Name: fecE Funciton: ABC Fe+3-siderophore transporter, ATPase subunit
	RB2654_09499	fecC	ABC-type Fe3+-siderophore transport system, permease component
	RB2654_09504	fecD	ABC-type Fe3+-siderophore transport system, permease component
	RB2654_09509	fecE	ABC Fe+3-siderophore transporter, ATPase subunit
Position: -52 Score: 5.2 Sequence: CCTGACGAATTTAGTCAGA Locus tag: RB2654_04329 Name: fbpA Funciton: Ferric iron ABC transporter, iron-binding protein
	RB2654_04329	fbpA	Ferric iron ABC transporter, iron-binding protein
Position: -67 Score: 4.9 Sequence: CCCGACTGATTTAGTCAAT Position: -34 Score: 4.7 Sequence: TCCGACTGAAACACTCAAC Locus tag: RB2654_09494 Name: fecB Funciton: ABC-type Fe3+-hydroxamate transport system, periplasmic component
	RB2654_09494	fecB	ABC-type Fe3+-hydroxamate transport system, periplasmic component
Position: -91 Score: 5.2 Sequence: TCCGACTGAATTTGTCAGA Locus tag: RB2654_08847 Name: null Funciton: hypothetical protein Locus tag: RB2654_08842 Name: hemP Funciton: Hemin uptake protein HemP Locus tag: RB2654_08837 Name: null Funciton: hypothetical protein
	RB2654_08847		hypothetical protein
	RB2654_08842	hemP	Hemin uptake protein HemP
	RB2654_08837		hypothetical protein
Position: -25 Score: 3.9 Sequence: CCCGATCACTTTACTCGGG Locus tag: RB2654_13154 Name: irpA Funciton: Iron-regulated protein A precursor Locus tag: RB2654_13144 Name: bfd Funciton: Bacterioferritin-associated ferredoxin
	RB2654_13154	irpA	Iron-regulated protein A precursor
	RB2654_13144	bfd	Bacterioferritin-associated ferredoxin

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD