Regulon of IscR in Oceanicola granulosus HTCC2516
| Regulator type: | Transcription factor |
| TF locus tag: | OG2516_03700 |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron-sulfur cluster biogenesis; Iron homeostasis |
| Effector: | Iron-sulfur cluster redox state; Iron ion, (Fe2+) |
| Regulog: | IscR - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 2 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - IscR
- By taxonomy - Rhodobacterales
- By TF family - Rrf2
- By effector - Iron-sulfur cluster redox state
- By effector - Iron ion, (Fe2+)
- By pathway - Iron-sulfur cluster biogenesis
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -58
Score: 4.9 Sequence: CCCGACCAAAATAGTCAGC
Locus tag: OG2516_03503
Name: fbpA Funciton: Ferric iron ABC transporter, iron-binding protein |
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fbpA
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Ferric iron ABC transporter, iron-binding protein
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Position: -44
Score: 3.6 Sequence: CCCGAGCGAAATGTTCGGG
Locus tag: OG2516_02803
Name: fbpC Funciton: Ferric iron ABC transporter, ATP-binding protein |
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fbpC
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Ferric iron ABC transporter, ATP-binding protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |