Regulon of IscR in Silicibacter pomeroyi DSS-3

Properties
Regulator type:	Transcription factor
TF locus tag:	SPO2025
Regulator family:	Rrf2
Regulation mode:	repressor (activator)
Biological process:	Iron-sulfur cluster biogenesis; Iron homeostasis
Effector:	Iron-sulfur cluster redox state; Iron ion, (Fe2+)
Regulog:	IscR - Rhodobacterales
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 125 sites [see more]

Member of regulog collections

By trascription factor - IscR
By taxonomy - Rhodobacterales
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By effector - Iron ion, (Fe2+)
By pathway - Iron-sulfur cluster biogenesis
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -141 Score: 4.1 Sequence: CTTGACGAATTCCCTCGGG Locus tag: SPO2025 Name: iscR Funciton: Iron-sulfur cluster regulator IscR, Rrf2 family
	SPO2025	iscR	Iron-sulfur cluster regulator IscR, Rrf2 family
Position: -99 Score: 4.6 Sequence: GGCGACAAAAATAGTCAGG Locus tag: SPO0789 Name: hemP Funciton: Hemin uptake protein HemP Locus tag: SPO0790 Name: null Funciton: hypothetical protein
	SPO0789	hemP	Hemin uptake protein HemP
	SPO0790		hypothetical protein
Position: -88 Score: 5.2 Sequence: ACTGACAAATTTAGTCAGA Locus tag: SPO0086 Name: irpA Funciton: Iron-regulated protein A precursor Locus tag: SPO0087 Name: hmuX Funciton: hypothetical porin Locus tag: SPO0088 Name: COG3488 Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites Locus tag: SPO0089 Name: COG3489 Funciton: Predicted periplasmic lipoprotein Locus tag: SPO0090 Name: COG3490 Funciton: Uncharacterised conserved protein UCP028101
	SPO0086	irpA	Iron-regulated protein A precursor
	SPO0087	hmuX	hypothetical porin
	SPO0088	COG3488	Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
	SPO0089	COG3489	Predicted periplasmic lipoprotein
	SPO0090	COG3490	Uncharacterised conserved protein UCP028101
Position: -27 Score: 4.1 Sequence: TCCGACTAAACTGGTCGAT Locus tag: SPO3288 Name: fbpB Funciton: Ferric iron ABC transporter, permease protein
	SPO3288	fbpB	Ferric iron ABC transporter, permease protein
Position: -50 Score: 4.7 Sequence: CCCGACTGAAATAATCAGT Locus tag: SPO3287 Name: fbpA Funciton: Ferric iron ABC transporter, iron-binding protein
	SPO3287	fbpA	Ferric iron ABC transporter, iron-binding protein

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD