Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of IscR in Jannaschia sp. CCS1

Properties
Regulator type: Transcription factor
TF locus tag: Jann_2366
Regulator family: Rrf2
Regulation mode: repressor (activator)
Biological process: Iron-sulfur cluster biogenesis; Iron homeostasis
Effector: Iron-sulfur cluster redox state; Iron ion, (Fe2+)
Regulog: IscR - Rhodobacterales
Statistics of regulated genes:
- Genes 32
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 125 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -287
Score: 5.2
Sequence: TCTGAGTAAAATACTCAGG
Position: -259
Score: 4.4
Sequence: GCATACTATTTTAGTCAGG
Locus tag: Jann_3275
Name: hemP
Funciton: Hemin uptake protein HemP
Jann_3275
hemP
Hemin uptake protein HemP
Position: -144
Score: 4.4
Sequence: GTTGACGCTTTTAGTCGGA
Locus tag: Jann_2132
Name: hmuR
Funciton: TonB-dependent hemin , ferrichrome receptor
Locus tag: Jann_2131
Name: Mlr1156
Funciton: Mlr1156 protein
Locus tag: Jann_2130
Name: exbB
Funciton: Ferric siderophore transport system, biopolymer transport protein ExbB
Locus tag: Jann_2129
Name: exbD1
Funciton: Ferric siderophore transport system, periplasmic binding protein ExbD
Locus tag: Jann_2128
Name: exbD2
Funciton: Ferric siderophore transport system, periplasmic binding protein ExbD
Locus tag: Jann_2127
Name: tonB
Funciton: Ferric siderophore transport system, periplasmic binding protein TonB
Jann_2132
hmuR
TonB-dependent hemin , ferrichrome receptor
Jann_2131
Mlr1156
Mlr1156 protein
Jann_2130
exbB
Ferric siderophore transport system, biopolymer transport protein ExbB
Jann_2129
exbD1
Ferric siderophore transport system, periplasmic binding protein ExbD
Jann_2128
exbD2
Ferric siderophore transport system, periplasmic binding protein ExbD
Jann_2127
tonB
Ferric siderophore transport system, periplasmic binding protein TonB
Position: -31
Score: 4.8
Sequence: CCTGAGTAATACACTCAAG
Locus tag: Jann_3277
Name: null
Funciton: hypothetical protein
Locus tag: Jann_3276
Name: dps
Funciton: DNA-binding ferritin-like protein (oxidative damage protectant)
Jann_3277
hypothetical protein
Jann_3276
dps
DNA-binding ferritin-like protein (oxidative damage protectant)
Position: -27
Score: 4
Sequence: CCCGATTGAAAAGATCGGA
Locus tag: Jann_1208
Name: fbpC
Funciton: Ferric iron ABC transporter, ATP-binding protein
Jann_1208
fbpC
Ferric iron ABC transporter, ATP-binding protein
Position: -61
Score: 4.4
Sequence: TCTAACTATTTCTGTCAGC
Position: -36
Score: 5.1
Sequence: TCTGACTAAAATACTCAAC
Locus tag: Jann_2122
Name: fecB
Funciton: ABC-type Fe3+-hydroxamate transport system, periplasmic component
Jann_2122
fecB
ABC-type Fe3+-hydroxamate transport system, periplasmic component
Position: -59
Score: 5.1
Sequence: GTTGAGTATTTTAGTCAGA
Position: -34
Score: 4.4
Sequence: GCTGACAGAAATAGTTAGA
Locus tag: Jann_2123
Name: fecC
Funciton: ABC-type Fe3+-siderophore transport system, permease component
Locus tag: Jann_2124
Name: fecD
Funciton: ABC-type Fe3+-siderophore transport system, permease component
Locus tag: Jann_2125
Name: fecE
Funciton: ABC Fe+3-siderophore transporter, ATPase subunit
Jann_2123
fecC
ABC-type Fe3+-siderophore transport system, permease component
Jann_2124
fecD
ABC-type Fe3+-siderophore transport system, permease component
Jann_2125
fecE
ABC Fe+3-siderophore transporter, ATPase subunit
Position: -253
Score: 4.7
Sequence: TCTGACAAAACAAGTCAGG
Locus tag: Jann_1368
Name: irpA
Funciton: Iron-regulated protein A precursor
Locus tag: Jann_1369
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: Jann_1370
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: Jann_1371
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
Jann_1368
irpA
Iron-regulated protein A precursor
Jann_1369
COG3488
Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Jann_1370
COG3489
Predicted periplasmic lipoprotein
Jann_1371
COG3490
Uncharacterised conserved protein UCP028101
Position: -127
Score: 3
Sequence: GATTCCAAATTGTGTCGGG
Locus tag: Jann_2366
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR, Rrf2 family
Locus tag: Jann_2365
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: Jann_2364
Name: sufB
Funciton: Iron-sulfur cluster assembly protein SufB
Locus tag: Jann_2363
Name: Jann_2362
Funciton: SAM-dependent methyltransferases
Locus tag: Jann_2362
Name: Jann_2362
Funciton: SAM-dependent methyltransferases
Locus tag: Jann_2361
Name: Jann_2361
Funciton: ExoV domain protein
Locus tag: Jann_2360
Name: null
Funciton: Methyltransferase FkbM
Locus tag: Jann_2359
Name: sufC
Funciton: Iron-sulfur cluster assembly ATPase protein SufC
Locus tag: Jann_2358
Name: sufD
Funciton: Iron-sulfur cluster assembly protein SufD
Locus tag: Jann_2357
Name: RSP_0433
Funciton: hypothetical protein
Locus tag: Jann_2356
Name: null
Funciton: hypothetical protein
Locus tag: Jann_2355
Name: sufS
Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Jann_2366
iscR
Iron-sulfur cluster regulator IscR, Rrf2 family
Jann_2365
iscS
Cysteine desulfurase (EC 2.8.1.7)
Jann_2364
sufB
Iron-sulfur cluster assembly protein SufB
Jann_2363
Jann_2362
SAM-dependent methyltransferases
Jann_2362
Jann_2362
SAM-dependent methyltransferases
Jann_2361
Jann_2361
ExoV domain protein
Jann_2360
Methyltransferase FkbM
Jann_2359
sufC
Iron-sulfur cluster assembly ATPase protein SufC
Jann_2358
sufD
Iron-sulfur cluster assembly protein SufD
Jann_2357
RSP_0433
hypothetical protein
Jann_2356
hypothetical protein
Jann_2355
sufS
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Position: -21
Score: 3.8
Sequence: CCCGACAAAAACACCAAGA
Locus tag: Jann_0134
Name: fbpB
Funciton: Ferric iron ABC transporter, permease protein
Jann_0134
fbpB
Ferric iron ABC transporter, permease protein
Position: -94
Score: 3.7
Sequence: TCAAAGTGTTTTTGTCGGA
Position: -37
Score: 5.3
Sequence: CCTGACTGTTTTAGTCGGA
Locus tag: Jann_0118
Name: fbpA
Funciton: Ferric iron ABC transporter, iron-binding protein
Jann_0118
fbpA
Ferric iron ABC transporter, iron-binding protein
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