Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Pseudoalteromonas atlantica T6c

Type Regulator Effector Pathway Genes Sites
TF ArgR Arginine Arginine degradation; Arginine biosynthesis 10 17
TF BetI Betaine Osmotic stress response 1 1
TF BirA Biotin Biotin biosynthesis 2 2
TF Crp Cyclic 3',5'-AMP Carbon catabolism 54 77
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 4 4
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 2 2
TF Fnr Oxygen Anaerobic metabolism 7 8
TF Fur Iron ion, (Fe2+) Iron homeostasis 8 8
TF GcvA Glycine Glycine metabolism 3 3
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 5 11
TF HutC cis-Urocanic acid Histidine utilization 2 3
TF IlvY Acetohydroxybutyrate; 2-Acetolactate Branched-chain amino acid biosynthesis 2 2
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 2 3
TF LexA DNA damage SOS response 7 8
TF LiuR Branched-chain amino acid degradation 3 6
TF MalR Maltose Maltodextrin utilization 3 3
TF NorR Nitric oxide Nitrosative stress response 1 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 4
TF PdhR Pyruvate Pyruvate metabolism 1 1
TF PrpR 2-methylcitrate Methylcitrate utilization 1 2
TF PUR Purine metabolism 1 1
TF SoxR Paraquat Superoxide stress response 1 1
TF TreR Trehalose Trehalose utilization 2 3
TF TyrR Tyrosine; Phenylalanine Amino acid utilization 10 14