Propagation of PdhR regulog to Pseudoalteromonas atlantica T6c
| Source regulog: | PdhR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Pyruvate metabolism |
| Effector: | Pyruvate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Pseudoalteromonas atlantica T6c |
| Orthologous TF(s) | Patl_3349 |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -80
Score: 6.4 Sequence: AATTGGTCTTACCAATT
Locus tag: Patl_3349
|
||||
| Patl_3349 | -80 | 6.4 | AATTGGTCTTACCAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pdhR | ||||
| Ortholog function: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family | ||||
| Shewanella oneidensis MR-1 | SO_0423 | -175 | 4.5 | TAATGGTCTGACCCCTT |
| -38 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella putrefaciens CN-32 | Sputcn32_3418 | -194 | 4.4 | AAATGGTCTGACCCCAT |
| -38 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella sp W3-18-1 | Sputw3181_0525 | -194 | 4.4 | AAATGGTCTGACCCCAT |
| -38 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella sp ANA-3 | Shewana3_0425 | -38 | 6.4 | AATTGGTAAGACCAATT |
| Shewanella sp MR-4 | Shewmr4_0427 | -175 | 4.4 | AAATGGTCTGACCCCAT |
| -38 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella sp MR-7 | Shewmr7_3600 | -175 | 4.4 | AAATGGTCTGACCCCAT |
| -38 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella baltica OS155 | Sbal_3914 | -175 | 4.4 | AAATGGTCTGACCCCAT |
| -38 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella denitrificans OS217 | Sden_3384 | -185 | 4.8 | AAATGGTCTGACCCCTT |
| -38 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_3778 | -186 | 4.8 | AAATGGTCTGACCCCTT |
| -49 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella amazonensis SB2B | Sama_0374 | -152 | 4.8 | AATTGGTCTGACCCCAT |
| -39 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella loihica PV-4 | Shew_3432 | -39 | 6.4 | AATTGGTAAGACCAATT |
| Shewanella pealeana ATCC 700345 | Spea_0418 | -158 | 4.2 | CATTGGTCAGACCCCAT |
| -39 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella halifaxensis HAW-EB4 | Shal_0475 | -157 | 4.4 | CATTGGTCTGACCCCTA |
| -39 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella piezotolerans WP3 | swp_4753 | -158 | 4.2 | CATTGGTCTGACCCCAT |
| -39 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella sediminis HAW-EB3 | Ssed_0430 | -158 | 4.5 | TAATGGTCAGACCCCTT |
| -39 | 6.4 | AATTGGTAAGACCAATT | ||
| Shewanella woodyi ATCC 51908 | Swoo_0318 | -159 | 4.3 | TAATGGTCTGACCGCTA |
| -39 | 6.4 | AATTGGTAAGACCAATT | ||