Propagation of HexR regulog to Pseudoalteromonas atlantica T6c
| Source regulog: | HexR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 2-keto-3-deoxy-6-phosphogluconate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Pseudoalteromonas atlantica T6c |
| Orthologous TF(s) | Patl_0969 |
| Regulated genes | 5 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -179
Score: 5.1 Sequence: TTGTAGTTAAATTACCA
Locus tag: Patl_1640
|
||||
| Patl_1640 | -179 | 5.1 | TTGTAGTTAAATTACCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gapB | ||||
| Ortholog function: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) | ||||
| Shewanella oneidensis MR-1 | SO_2347 | -182 | 5 | CTCTAATAAAATTACAG |
| Shewanella putrefaciens CN-32 | Sputcn32_1891 | -181 | 5.2 | TTCTAATAAAATTACAT |
| Shewanella sp W3-18-1 | Sputw3181_2117 | -181 | 5.2 | TTCTAATAAAATTACAT |
| Shewanella sp ANA-3 | Shewana3_2122 | -183 | 5 | CTCTAATAAAATTACAG |
| Shewanella sp MR-4 | Shewmr4_2021 | -183 | 5 | CTCTAATAAAATTACAG |
| Shewanella sp MR-7 | Shewmr7_1954 | -183 | 5 | CTCTAATAAAATTACAG |
| Shewanella baltica OS155 | Sbal_2216 | -181 | 5.2 | TTCTAATAAAATTACAG |
| Shewanella denitrificans OS217 | Sden_1793 | -181 | 5.1 | ATCTAATAAAATTACAT |
| Shewanella frigidimarina NCIMB 400 | Sfri_1942 | -178 | 4.6 | GTCTAATAAAATTACAC |
| Shewanella amazonensis SB2B | Sama_1806 | -181 | 5.2 | CTCTAATAAAATTACAA |
| Shewanella loihica PV-4 | Shew_2000 | -181 | 4.9 | ATCTAATAAAATTACAC |
| Shewanella pealeana ATCC 700345 | Spea_2106 | -182 | 5 | ATCTAATAAAATTACAG |
| Shewanella halifaxensis HAW-EB4 | Shal_2078 | -182 | 5.2 | TTCTAATAAAATTACAT |
| Shewanella piezotolerans WP3 | swp_2537 | -347 | 5.1 | ATCTAATTAAATTACAT |
| Shewanella sediminis HAW-EB3 | Ssed_2226 | -182 | 4.9 | TGCTAATAAAATTACAA |
| Shewanella woodyi ATCC 51908 | Swoo_2395 | -179 | 4.9 | TGCTAATAAAATTACAA |