Propagation of MalR regulog to Pseudoalteromonas atlantica T6c
| Source regulog: | MalR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Maltodextrin utilization |
| Effector: | Maltose |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Pseudoalteromonas atlantica T6c |
| Orthologous TF(s) | Patl_2185 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -166
Score: 6 Sequence: GTTGAATACGTATGCAGT
Locus tag: Patl_1940
|
||||
| Patl_1940 | -166 | 6 | GTTGAATACGTATGCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: omp(Mal)2 | ||||
| Ortholog function: Predicted maltose-specific TonB-dependent receptor | ||||
| Shewanella amazonensis SB2B | Sama_0286 | -140 | 6 | TGTGAATACGTATGCATA |
| Shewanella piezotolerans WP3 | swp_3412 | -143 | 6 | TATGAATACGTATGCAGC |
|
Position: -212
Score: 6.1 Sequence: TCTGAATACGTATGCAAG
Locus tag: Patl_2187
|
||||
| Patl_2187 | -212 | 6.1 | TCTGAATACGTATGCAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malT | ||||
| Ortholog function: Predicted maltose transporter MalT | ||||
| Shewanella oneidensis MR-1 | SO_2458 | -393 | 5.6 | gaTGaATACGTATGtAAg |
| Shewanella sp ANA-3 | Shewana3_1925 | -377 | 5.6 | GATGAATACGTATGTAAG |
| Shewanella baltica OS155 | Sbal_2347 | -518 | 5.6 | gaTGaATACGTATGtAAg |
| Shewanella denitrificans OS217 | Sden_2003 | -294 | 5.6 | GATGAATACGTATGTAGT |
| Shewanella frigidimarina NCIMB 400 | Sfri_1776 | -353 | 5.6 | CATGAATACGTATGTAGT |
| Shewanella amazonensis SB2B | Sama_1657 | -268 | 5.6 | GATGAATACGTATGTAAG |
| Shewanella piezotolerans WP3 | swp_2681 | -469 | 5.5 | caTGaATACGTATGtAtt |
| Shewanella woodyi ATCC 51908 | Swoo_2202 | -282 | 5.9 | CATGAATACGTATGCAAG |