Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator MalR in Shewanellaceae

Properties
Regulator family: LacI
Regulation mode: repressor
Biological process: Maltodextrin utilization
Effector: Maltose
Regulog: MalR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_2458 malT -393 5.6 gaTGaATACGTATGtAAg
SO_2162 omp(Mal) -202 6.1 ATTGAATACGTATGCACA
SO_2450 susB -90 5.4 GTGGAATACGTATGCAAG
SO_2162 omp(Mal) -351 6.2 CCTGCATACGTATGCAAA
Shewanella sp ANA-3
Shewana3_2312 omp(Mal) -204 6.1 ATTGAATACGTATGCACA
Shewana3_2312 omp(Mal) -353 6.2 CCTGCATACGTATGCAAA
Shewana3_2311 malZ -163 6.2 TTTGCATACGTATGCAGG
Shewana3_2311 malZ -312 6.1 TGTGCATACGTATTCAAT
Shewana3_1925 malT -377 5.6 GATGAATACGTATGTAAG
Shewana3_1931 susB -90 6 GGTGAATACGTATGCAAA
Shewanella sp MR-4
Shewmr4_2133 malZ -312 6.1 TGTGCATACGTATTCAAT
Shewmr4_2133 malZ -163 6.2 TTTGCATACGTATGCAGG
Shewmr4_2134 omp(Mal) -204 6.1 ATTGAATACGTATGCACA
Shewmr4_2134 omp(Mal) -353 6.2 CCTGCATACGTATGCAAA
Shewmr4_1870 malT -378 5.6 GATGAATACGTATGTAAG
Shewmr4_1876 susB -90 6 GGTGAATACGTATGCAAA
Shewanella sp MR-7
Shewmr7_2210 omp(Mal) -353 6.2 CCTGCATACGTATGCAAA
Shewmr7_2209 malZ -312 6.1 TGTGCATACGTATTCAAT
Shewmr7_2209 malZ -163 6.2 TTTGCATACGTATGCAGG
Shewmr7_2210 omp(Mal) -204 6.1 ATTGAATACGTATGCACA
Shewmr7_2108 malT -378 5.6 GATGAATACGTATGTAAG
Shewmr7_2102 susB -90 6 GGTGAATACGTATGCAAA
Shewanella baltica OS155
Sbal_2347 malT -518 5.6 gaTGaATACGTATGtAAg
Sbal_2287 malZ -312 6 AGTGCATACGTATTCAAT
Sbal_2287 malZ -163 6.2 TCTGCATACGTATGCAGG
Sbal_2288 omp(Mal) -201 6 ATTGAATACGTATGCACT
Sbal_2288 omp(Mal) -350 6.2 CCTGCATACGTATGCAGA
Sbal_2329 susB -90 5.9 GGTGAATACGTATGCAGG
Shewanella denitrificans OS217
Sden_2029 omp(Mal) -205 6.1 ATTGAATACGTATGCATA
Sden_2029 omp(Mal) -354 6.2 ACTGCATACGTATGCAAA
Sden_2028 malZ -143 6.2 TTTGCATACGTATGCAGT
Sden_2028 malZ -292 6.1 TATGCATACGTATTCAAT
Sden_2002 susB -100 5.7 CCTGAATACGTATGTAGT
Sden_2003 malT -294 5.6 GATGAATACGTATGTAGT
Sden_1800 amyA -112 6 TATGCATACGTATTCATA
Shewanella frigidimarina NCIMB 400
Sfri_1788 malZ -147 6.2 TTTGCATACGTATGCAGG
Sfri_1788 malZ -296 6 TATGCATACGTATTCAAC
Sfri_1787 omp(Mal) -375 6.2 CCTGCATACGTATGCAAA
Sfri_1787 omp(Mal) -226 6 GTTGAATACGTATGCATA
Sfri_1777 susB -92 6.1 ACTGAATACGTATGCAAA
Sfri_1776 malT -353 5.6 CATGAATACGTATGTAGT
Shewanella amazonensis SB2B
Sama_1662 malZ -167 6.1 TGTGCATACGTATGCAGC
Sama_1662 malZ -317 6.1 AGTGCATACGTATTCAAA
Sama_1108 susB -89 6 GCTGAATACGTATGCAGC
Sama_1657 malT -268 5.6 GATGAATACGTATGTAAG
Sama_1661 omp(Mal) -206 6.1 TTTGAATACGTATGCACT
Sama_1661 omp(Mal) -356 6.1 GCTGCATACGTATGCACA
Sama_0286 omp(Mal)2 -140 6 TGTGAATACGTATGCATA
Shewanella loihica PV-4
Shew_1889 malZ -311 6.1 TATGCATACGTATTCAAA
Shew_1889 malZ -160 6.2 TTTGCATACGTATGCAGT
Shew_1876 susB -164 5.9 GGTGAATACGTATGCAGC
Shew_1874 malT -316 5.6 GATGAATACGTATGTAAT
Shew_1888 omp(Mal) -192 6.1 TTTGAATACGTATGCATA
Shew_1888 omp(Mal) -343 6.2 ACTGCATACGTATGCAAA
Shewanella piezotolerans WP3
swp_2681 malT -469 5.5 caTGaATACGTATGtAtt
swp_2670 malZ -154 5.9 ATTACATACGTATGCAGA
swp_2670 malZ -303 6.1 TATGCATACGTATTCAAT
swp_2676 susB -111 6.1 TTTGAATACGTATGCAAG
swp_2671 omp(Mal) -187 6.1 ATTGAATACGTATGCATA
swp_2671 omp(Mal) -336 5.9 TCTGCATACGTATGTAAT
swp_3412 omp(Mal)2 -143 6 TATGAATACGTATGCAGC
Shewanella woodyi ATCC 51908
Swoo_2210 malZ -198 6.1 TATGCATACGTATTCAAA
Swoo_2210 malZ -47 6.2 TATGCATACGTATGCAGA
Swoo_2202 malT -282 5.9 CATGAATACGTATGCAAG
Swoo_2209 omp(Mal) -194 6.1 TTTGAATACGTATGCATA
Swoo_2209 omp(Mal) -345 6.2 TCTGCATACGTATGCATA
Swoo_3416 amyA2 -178 6.1 AATGAATACGTATGCAAA
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