Profile of regulator MalR in Shewanellaceae
Properties
| Regulator family: |
LacI |
| Regulation mode: |
repressor |
| Biological process: |
Maltodextrin utilization |
| Effector: |
Maltose |
| Regulog: |
MalR - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella oneidensis MR-1
|
|
SO_2458 |
malT |
-393 |
5.6 |
gaTGaATACGTATGtAAg |
|
SO_2162 |
omp(Mal) |
-202 |
6.1 |
ATTGAATACGTATGCACA |
|
SO_2450 |
susB |
-90 |
5.4 |
GTGGAATACGTATGCAAG |
|
SO_2162 |
omp(Mal) |
-351 |
6.2 |
CCTGCATACGTATGCAAA |
|
Shewanella sp ANA-3
|
|
Shewana3_2312 |
omp(Mal) |
-204 |
6.1 |
ATTGAATACGTATGCACA |
|
Shewana3_2312 |
omp(Mal) |
-353 |
6.2 |
CCTGCATACGTATGCAAA |
|
Shewana3_2311 |
malZ |
-163 |
6.2 |
TTTGCATACGTATGCAGG |
|
Shewana3_2311 |
malZ |
-312 |
6.1 |
TGTGCATACGTATTCAAT |
|
Shewana3_1925 |
malT |
-377 |
5.6 |
GATGAATACGTATGTAAG |
|
Shewana3_1931 |
susB |
-90 |
6 |
GGTGAATACGTATGCAAA |
|
Shewanella sp MR-4
|
|
Shewmr4_2133 |
malZ |
-312 |
6.1 |
TGTGCATACGTATTCAAT |
|
Shewmr4_2133 |
malZ |
-163 |
6.2 |
TTTGCATACGTATGCAGG |
|
Shewmr4_2134 |
omp(Mal) |
-204 |
6.1 |
ATTGAATACGTATGCACA |
|
Shewmr4_2134 |
omp(Mal) |
-353 |
6.2 |
CCTGCATACGTATGCAAA |
|
Shewmr4_1870 |
malT |
-378 |
5.6 |
GATGAATACGTATGTAAG |
|
Shewmr4_1876 |
susB |
-90 |
6 |
GGTGAATACGTATGCAAA |
|
Shewanella sp MR-7
|
|
Shewmr7_2210 |
omp(Mal) |
-353 |
6.2 |
CCTGCATACGTATGCAAA |
|
Shewmr7_2209 |
malZ |
-312 |
6.1 |
TGTGCATACGTATTCAAT |
|
Shewmr7_2209 |
malZ |
-163 |
6.2 |
TTTGCATACGTATGCAGG |
|
Shewmr7_2210 |
omp(Mal) |
-204 |
6.1 |
ATTGAATACGTATGCACA |
|
Shewmr7_2108 |
malT |
-378 |
5.6 |
GATGAATACGTATGTAAG |
|
Shewmr7_2102 |
susB |
-90 |
6 |
GGTGAATACGTATGCAAA |
|
Shewanella baltica OS155
|
|
Sbal_2347 |
malT |
-518 |
5.6 |
gaTGaATACGTATGtAAg |
|
Sbal_2287 |
malZ |
-312 |
6 |
AGTGCATACGTATTCAAT |
|
Sbal_2287 |
malZ |
-163 |
6.2 |
TCTGCATACGTATGCAGG |
|
Sbal_2288 |
omp(Mal) |
-201 |
6 |
ATTGAATACGTATGCACT |
|
Sbal_2288 |
omp(Mal) |
-350 |
6.2 |
CCTGCATACGTATGCAGA |
|
Sbal_2329 |
susB |
-90 |
5.9 |
GGTGAATACGTATGCAGG |
|
Shewanella denitrificans OS217
|
|
Sden_2029 |
omp(Mal) |
-205 |
6.1 |
ATTGAATACGTATGCATA |
|
Sden_2029 |
omp(Mal) |
-354 |
6.2 |
ACTGCATACGTATGCAAA |
|
Sden_2028 |
malZ |
-143 |
6.2 |
TTTGCATACGTATGCAGT |
|
Sden_2028 |
malZ |
-292 |
6.1 |
TATGCATACGTATTCAAT |
|
Sden_2002 |
susB |
-100 |
5.7 |
CCTGAATACGTATGTAGT |
|
Sden_2003 |
malT |
-294 |
5.6 |
GATGAATACGTATGTAGT |
|
Sden_1800 |
amyA |
-112 |
6 |
TATGCATACGTATTCATA |
|
Shewanella frigidimarina NCIMB 400
|
|
Sfri_1788 |
malZ |
-147 |
6.2 |
TTTGCATACGTATGCAGG |
|
Sfri_1788 |
malZ |
-296 |
6 |
TATGCATACGTATTCAAC |
|
Sfri_1787 |
omp(Mal) |
-375 |
6.2 |
CCTGCATACGTATGCAAA |
|
Sfri_1787 |
omp(Mal) |
-226 |
6 |
GTTGAATACGTATGCATA |
|
Sfri_1777 |
susB |
-92 |
6.1 |
ACTGAATACGTATGCAAA |
|
Sfri_1776 |
malT |
-353 |
5.6 |
CATGAATACGTATGTAGT |
|
Shewanella amazonensis SB2B
|
|
Sama_1662 |
malZ |
-167 |
6.1 |
TGTGCATACGTATGCAGC |
|
Sama_1662 |
malZ |
-317 |
6.1 |
AGTGCATACGTATTCAAA |
|
Sama_1108 |
susB |
-89 |
6 |
GCTGAATACGTATGCAGC |
|
Sama_1657 |
malT |
-268 |
5.6 |
GATGAATACGTATGTAAG |
|
Sama_1661 |
omp(Mal) |
-206 |
6.1 |
TTTGAATACGTATGCACT |
|
Sama_1661 |
omp(Mal) |
-356 |
6.1 |
GCTGCATACGTATGCACA |
|
Sama_0286 |
omp(Mal)2 |
-140 |
6 |
TGTGAATACGTATGCATA |
|
Shewanella loihica PV-4
|
|
Shew_1889 |
malZ |
-311 |
6.1 |
TATGCATACGTATTCAAA |
|
Shew_1889 |
malZ |
-160 |
6.2 |
TTTGCATACGTATGCAGT |
|
Shew_1876 |
susB |
-164 |
5.9 |
GGTGAATACGTATGCAGC |
|
Shew_1874 |
malT |
-316 |
5.6 |
GATGAATACGTATGTAAT |
|
Shew_1888 |
omp(Mal) |
-192 |
6.1 |
TTTGAATACGTATGCATA |
|
Shew_1888 |
omp(Mal) |
-343 |
6.2 |
ACTGCATACGTATGCAAA |
|
Shewanella piezotolerans WP3
|
|
swp_2681 |
malT |
-469 |
5.5 |
caTGaATACGTATGtAtt |
|
swp_2670 |
malZ |
-154 |
5.9 |
ATTACATACGTATGCAGA |
|
swp_2670 |
malZ |
-303 |
6.1 |
TATGCATACGTATTCAAT |
|
swp_2676 |
susB |
-111 |
6.1 |
TTTGAATACGTATGCAAG |
|
swp_2671 |
omp(Mal) |
-187 |
6.1 |
ATTGAATACGTATGCATA |
|
swp_2671 |
omp(Mal) |
-336 |
5.9 |
TCTGCATACGTATGTAAT |
|
swp_3412 |
omp(Mal)2 |
-143 |
6 |
TATGAATACGTATGCAGC |
|
Shewanella woodyi ATCC 51908
|
|
Swoo_2210 |
malZ |
-198 |
6.1 |
TATGCATACGTATTCAAA |
|
Swoo_2210 |
malZ |
-47 |
6.2 |
TATGCATACGTATGCAGA |
|
Swoo_2202 |
malT |
-282 |
5.9 |
CATGAATACGTATGCAAG |
|
Swoo_2209 |
omp(Mal) |
-194 |
6.1 |
TTTGAATACGTATGCATA |
|
Swoo_2209 |
omp(Mal) |
-345 |
6.2 |
TCTGCATACGTATGCATA |
|
Swoo_3416 |
amyA2 |
-178 |
6.1 |
AATGAATACGTATGCAAA |
Export
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