Propagation of Fnr regulog to Pseudoalteromonas atlantica T6c

Reference regulog properties
Source regulog:	Fnr - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:
Biological process:	Anaerobic metabolism
Effector:	Oxygen
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Pseudoalteromonas atlantica T6c
Orthologous TF(s)	No orthologous TFs found
Regulated genes	7

Built upon 541 sites [see more]

Predicted regulatory interactions in *Pseudoalteromonas atlantica T6c*
	Locus tag	Position	Score	Sequence
Position: -130 Score: 5 Sequence: TTGATCCAGCTCAA Position: -70 Score: 5.4 Sequence: TTGATGTAGATCAA Locus tag: Patl_0030
	Patl_0030	-130	5	TTGATCCAGCTCAA
		-70	5.4	TTGATGTAGATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: Outer membrane protein W precursor
Shewanella amazonensis SB2B	Sama_1371	-105	5.2	TTGATTTGGATCAA
Shewanella baltica OS155	Sbal_1490	-103	5.2	TTGATTTGGATCAA
Shewanella denitrificans OS217	Sden_2589	-153	4.5	GTGAATTAGATCAA
		-103	5.3	TTGATCCAGATCAA
Shewanella frigidimarina NCIMB 400	Sfri_1334	-166	4.6	GTGATCCAAATCAA
		-105	5.3	TTGATCTAAATCAA
Shewanella halifaxensis HAW-EB4	Shal_2887	-107	4.4	TTGATTCAGGTCAA
Shewanella oneidensis MR-1	SO1673	-293	4.3	TTGATGTAAATGAA
		-106	5.2	TTGATTTGGATCAA
Shewanella pealeana ATCC 700345	Spea_2787	-155	4.3	GTGATCTAGATCCT
		-104	5.3	TTGATTTAGATCAA
Shewanella piezotolerans WP3	swp_3395	-107	5.6	TTGATCTAGATCAA
Shewanella putrefaciens CN-32	Sputcn32_1392	-103	5.3	TTGATTTAGATCAA
Shewanella sediminis HAW-EB3	Ssed_1469	-154	3.8	GTGAGCTTGGTCAT
		-104	5.6	TTGATCTGGATCAA
Shewanella sp ANA-3	Shewana3_2775	-103	5.2	TTGATTTGGATCAA
Shewanella sp MR-4	Shewmr4_2601	-103	5.2	TTGATTTGGATCAA
Shewanella sp MR-7	Shewmr7_2668	-103	5.2	TTGATTTGGATCAA
Shewanella sp W3-18-1	Sputw3181_2709	-103	5.3	TTGATTTAGATCAA
Shewanella woodyi ATCC 51908	Swoo_3207	-154	4.1	GTGAGTTCGATCAA
		-104	5.2	TTGATTTGGATCAA

Position: -311 Score: 4.8 Sequence: ATGATCTAAAGCAA Locus tag: Patl_2147
	Patl_2147	-311	4.8	ATGATCTAAAGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: etfD
Ortholog function: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Shewanella amazonensis SB2B	Sama_3523	-184	4.6	TTGGTCTGGATCAT
Shewanella loihica PV-4	Shew_0086	-175	3.9	TTGTTTAAGATCAA
Shewanella oneidensis MR-1	SO4453	-198	4.3	TTGATCAGGTTCAA
Shewanella putrefaciens CN-32	Sputcn32_0388	-198	4.2	TTGGCCTAGATCAA
Shewanella sediminis HAW-EB3	Ssed_4403	-177	4.6	TTGCTCAAGATCAA
Shewanella sp ANA-3	Shewana3_0273	-202	4.3	TTGATCCGCTTCAA
Shewanella sp MR-4	Shewmr4_0272	-202	4.3	TTGATCCGCTTCAA
Shewanella sp MR-7	Shewmr7_3749	-202	4.3	TTGATCCGCTTCAA
Shewanella sp W3-18-1	Sputw3181_0242	-198	4.2	TTGGCCTAGATCAA
Shewanella woodyi ATCC 51908	Swoo_4794	-162	4.5	TTGCTCAGGATCAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fnr regulog to Pseudoalteromonas atlantica T6c

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --