Propagation of NtrC regulog to Pseudoalteromonas atlantica T6c

Reference regulog properties
Source regulog:	NtrC - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Pseudoalteromonas atlantica T6c
Orthologous TF(s)	Patl_1028
Regulated genes	3

Built upon 94 sites [see more]

Predicted regulatory interactions in *Pseudoalteromonas atlantica T6c*
	Locus tag	Position	Score	Sequence
Position: -178 Score: 5 Sequence: TGCGCTAATTCGGTGCA Locus tag: Patl_0491
	Patl_0491	-178	5	TGCGCTAATTCGGTGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnB
Ortholog function: nitrogen regulatory protein P-II 1
Shewanella oneidensis MR-1	SO_0761	-142	5.5	TGCACAATTCTGGTGCA
Shewanella putrefaciens CN-32	Sputcn32_3241	-143	5.5	TGCACAAATGTGGTGCA
Shewanella sp W3-18-1	Sputw3181_0700	-143	5.5	TGCACAAATGTGGTGCA
Shewanella sp ANA-3	Shewana3_3532	-143	5.2	TGCACAAGTCTGGTGCA
Shewanella sp MR-4	Shewmr4_3362	-143	5.2	TGCACAAGTCTGGTGCA
Shewanella sp MR-7	Shewmr7_0591	-143	5.2	TGCACAAGTCTGGTGCA
Shewanella baltica OS155	Sbal_0797	-144	5.1	TGCTCGATCATGGTGCA
Shewanella denitrificans OS217	Sden_2905	-195	5.2	TGCGCCACTTAGGTGCA
		-152	5.7	CGCACCTTATTGGTGCA
Shewanella frigidimarina NCIMB 400	Sfri_0623	-183	5.4	TGCACCAAAACGATGCA
Shewanella amazonensis SB2B	Sama_0650	-172	5.6	TGCACCACCTTGGTGCG
		-142	4.7	TGCACTTTTTTTGTGCG
Shewanella loihica PV-4	Shew_0846	-172	4.5	TGCGCTATTTTTGTGCG
		-142	5.8	CGCACCTAATTGGTGCA
Shewanella pealeana ATCC 700345	Spea_0833	-135	5.5	TGCACCTTGCTGGTGCA
Shewanella halifaxensis HAW-EB4	Shal_0888	-137	4.7	CGCACTCGAATGGTGCA
Shewanella piezotolerans WP3	swp_3956	-136	5.4	TGCACCCGATTGGTGCA
Shewanella sediminis HAW-EB3	Ssed_0933	-151	5.1	CGCACTTGTTTGGTGCA
Shewanella woodyi ATCC 51908	Swoo_0979	-173	4.6	TGCGCTAATTCCGTGCA
		-143	5.4	CGCACCTTAATGGTGCG

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --