Regulons of Thermotoga neapolitana DSM 4359
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
AraR |
Arabinose |
Arabinose utilization |
5 |
4 |
| TF |
ArgR |
Arginine |
Arginine biosynthesis |
2 |
2 |
| TF |
BglR |
Cellobiose |
Beta-glucosides utilization |
1 |
1 |
| TF |
CelR |
Cellobiose |
Cellobiose utilization |
6 |
5 |
| TF |
ChiR |
Chitobiose |
Chitobiose utilization |
1 |
1 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
5 |
2 |
| TF |
GalR |
Galactose |
Galactosides utilization |
1 |
3 |
| TF |
GluR |
Glucose |
Glucose utilization; Trehalose utilization |
2 |
2 |
| TF |
HcpR |
Nitric oxide |
Nitrosative stress response |
2 |
1 |
| TF |
HrcA |
Heat shock |
Heat shock response |
6 |
5 |
| TF |
IolR |
|
Inositol utilization |
1 |
1 |
| TF |
KdgR |
2-keto-3-deoxygluconate |
Glucuronate utilization |
6 |
4 |
| TF |
ManR |
Mannose |
Mannan and beta-mannosides utilization |
1 |
1 |
| TF |
NiaR |
Niacin |
NAD biosynthesis |
2 |
2 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
4 |
8 |
| TF |
PhoB |
Inorganic phosphate |
Phosphate metabolism |
1 |
1 |
| TF |
PuuR |
Putrescine |
Spermidine biosynthesis |
2 |
2 |
| TF |
RbsR |
Ribose |
Ribose utilization |
1 |
2 |
| TF |
Rex |
NADH |
Energy metabolism |
12 |
12 |
| TF |
Rex1 |
NADH |
Energy metabolism |
1 |
1 |
| TF |
RhaR |
Rhamnose |
Rhamnose utilization; Rhamnose oligosaccharides utilization |
3 |
3 |
| TF |
TM0766 |
|
Hypothetical ABC transporter |
2 |
1 |
| TF |
TM1030 |
|
Multidrug resistance |
1 |
1 |
| TF |
TreR |
Trehalose |
Trehalose utilization |
2 |
2 |
| TF |
UctR |
|
Sugar utilization |
1 |
1 |
| TF |
UgpR |
|
Possibly alpha-mannosides utilization |
1 |
1 |
| TF |
UgtR |
|
Sugar utilization |
1 |
1 |
| TF |
UxaR |
|
Galacturonate utilization; Pectin utilization |
4 |
3 |
| TF |
XylR |
Xylose; Glucose |
Xylose utilization |
9 |
8 |
| TF |
ZnuR |
|
Zinc homeostasis |
1 |
1 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
1 |
1 |
| RNA |
Cobalamin |
Adenosylcobalamin |
Cobalamin biosynthesis |
3 |
1 |
| RNA |
FMN |
Flavin mononucleotide |
Riboflavin biosynthesis |
1 |
1 |
| RNA |
L10_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
L20_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
L21_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
Lysine |
Lysine |
Lysine biosynthesis |
1 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
1 |
1 |
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