Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of RbsR in Thermotoga neapolitana DSM 4359

Properties
Regulator type: Transcription factor
TF locus tag: CTN_1627
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Regulog: RbsR - Thermotogales
Statistics of regulated genes:
- Genes 12
- Operons 1
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 15 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: 32
Score: 6.5
Sequence: TTGTGAAAACGATTTCGAAA
Position: 44
Score: 5.9
Sequence: TTTCGAAAACGATTTCATCA
Locus tag: CTN_1616
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: CTN_1617
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: CTN_1618
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: CTN_1619
Name: TM0957
Funciton: hypothetical protein
Locus tag: CTN_1620
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: CTN_1621
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: CTN_1622
Name: tktA
Funciton: transketolase, N-terminal subunit
Locus tag: CTN_1623
Name: tktB
Funciton: transketolase, C-terminal subunit
Locus tag: CTN_1624
Name: drlK
Funciton: Predicted D-ribulose kinase, FGGY family
Locus tag: CTN_1625
Name: darA
Funciton: Predicted D-arabinose isomerase
Locus tag: CTN_1626
Name: TM0950
Funciton: hypothetical protein
Locus tag: CTN_1627
Name: rbsR
Funciton: Predicted regulator of ribose utilization, LacI family
rbsK
Ribokinase (EC 2.7.1.15)
rbsD
D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
rbsB
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
TM0957
hypothetical protein
rbsA
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
rbsC
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
tktA
transketolase, N-terminal subunit
tktB
transketolase, C-terminal subunit
drlK
Predicted D-ribulose kinase, FGGY family
darA
Predicted D-arabinose isomerase
TM0950
hypothetical protein
rbsR
Predicted regulator of ribose utilization, LacI family
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