Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator RbsR in Thermotogales

Properties
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Regulog: RbsR - Thermotogales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Thermotoga maritima MSB8
TM0960 rbsK -34 5.9 TTTCGAAAACGATTTCATCA
TM0960 rbsK -46 6.5 TTGTGAAAACGATTTCGAAA
Thermotoga neapolitana DSM 4359
CTN_1616 rbsK 32 6.5 TTGTGAAAACGATTTCGAAA
CTN_1616 rbsK 44 5.9 TTTCGAAAACGATTTCATCA
Thermotoga petrophila RKU-1
Tpet_1789 rbsK -56 6.5 TTGTGAAAACGATTTCGAAA
Tpet_1789 rbsK -44 6.6 TTTCGAAAACGTTTTCAAAG
Thermotoga naphthophila RKU-10
Tnap_1790 rbsK -56 6.5 TTGTGAAAACGATTTCGAAA
Tnap_1790 rbsK -44 6.6 TTTCGAAAACGTTTTCAAAG
Thermotoga lettingae TMO
Tlet_1324 rbsR -47 5.8 TTTCAAGAACGTTTTCAAAA
Tlet_1324 rbsR -59 6.5 TCTTGAAAACGTTTTCAAGA
Thermosipho africanus TCF52B
THA_669 rbsD -30 5.9 TTTCGAAAACGTTTTCTAGG
THA_669 rbsD -42 6 ATACGAAAACGTTTTCGAAA
Petrotoga mobilis SJ95
Pmob_0919 rbsR -43 6 TTCCGAAAACGTTTGCATAA
Thermotogales bacterium TBF 19.5.1
Kole_0605 rbsR -39 5 TCATGTAAACGTTTACGTAA
Kole_0605 rbsR -27 5.6 TTACGTAAACGTTTTCAGGA
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Regulatory Sites [ FASTA format ] DOWNLOAD