Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of KdgR in Thermotoga neapolitana DSM 4359

Properties
Regulator type: Transcription factor
TF locus tag: CTN_0629
Regulator family: IclR
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: 2-keto-3-deoxygluconate
Regulog: KdgR - Thermotogales
Statistics of regulated genes:
- Genes 11
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 26 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -48
Score: 6.1
Sequence: TGTGAAAATGATTTTCTCA
Locus tag: CTN_0629
Name: kdgR
Funciton: Predicted 2-keto-3-deoxygluconate-responsive regulator of glucuronate utilization, IclR family
kdgR
Predicted 2-keto-3-deoxygluconate-responsive regulator of glucuronate utilization, IclR family

Position: -91
Score: 5.9
Sequence: TTTGAAAGCCTTTTTCACA
Locus tag: CTN_0632
Name: xynA1
Funciton: Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)
xynA1
Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)

Position: -33
Score: 6.1
Sequence: TGAGAAAATCATTTTCACA
Locus tag: CTN_0630
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: CTN_0631
Name: null
Funciton: hypothetical protein
uxaC
Uronate isomerase (EC 5.3.1.12)
hypothetical protein

Position: -191
Score: 5.9
Sequence: TGTGAAAAAGGCTTTCAAA
Locus tag: CTN_0633
Name: null
Funciton: Transposase, IS605 OrfB family
Locus tag: CTN_0634
Name: xtpF
Funciton: Xylan oligosaccharide ABC transporter, permease component 1
Locus tag: CTN_0635
Name: xtpG
Funciton: Xylan oligosaccharide ABC transporter, permease component 2
Locus tag: CTN_0636
Name: xtpK
Funciton: Xylan oligosaccharide ABC transporter, ATP-binding protein 1
Locus tag: CTN_0637
Name: xtpL
Funciton: Xylan oligosaccharide ABC transporter, ATP-binding protein 2
Locus tag: CTN_0638
Name: xtpE
Funciton: Xylan oligosaccharide ABC transporter, substrate-binding component
Locus tag: CTN_0639
Name: aguA
Funciton: Alpha-glucuronidase (EC 3.2.1.139)
Transposase, IS605 OrfB family
xtpF
Xylan oligosaccharide ABC transporter, permease component 1
xtpG
Xylan oligosaccharide ABC transporter, permease component 2
xtpK
Xylan oligosaccharide ABC transporter, ATP-binding protein 1
xtpL
Xylan oligosaccharide ABC transporter, ATP-binding protein 2
xtpE
Xylan oligosaccharide ABC transporter, substrate-binding component
aguA
Alpha-glucuronidase (EC 3.2.1.139)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD