Regulon of KdgR in Thermotoga neapolitana DSM 4359

Properties
Regulator type:	Transcription factor
TF locus tag:	CTN_0629
Regulator family:	IclR
Regulation mode:	repressor
Biological process:	Glucuronate utilization
Effector:	2-keto-3-deoxygluconate
Regulog:	KdgR - Thermotogales
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By trascription factor - KdgR
By TF family - IclR
By effector - 2-keto-3-deoxygluconate
By pathway - Glucuronate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -48 Score: 6.1 Sequence: TGTGAAAATGATTTTCTCA Locus tag: CTN_0629 Name: kdgR Funciton: Predicted 2-keto-3-deoxygluconate-responsive regulator of glucuronate utilization, IclR family
	CTN_0629	kdgR	Predicted 2-keto-3-deoxygluconate-responsive regulator of glucuronate utilization, IclR family
Position: -91 Score: 5.9 Sequence: TTTGAAAGCCTTTTTCACA Locus tag: CTN_0632 Name: xynA1 Funciton: Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)
	CTN_0632	xynA1	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)
Position: -33 Score: 6.1 Sequence: TGAGAAAATCATTTTCACA Locus tag: CTN_0630 Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12) Locus tag: CTN_0631 Name: null Funciton: hypothetical protein
	CTN_0630	uxaC	Uronate isomerase (EC 5.3.1.12)
	CTN_0631		hypothetical protein
Position: -191 Score: 5.9 Sequence: TGTGAAAAAGGCTTTCAAA Locus tag: CTN_0633 Name: null Funciton: Transposase, IS605 OrfB family Locus tag: CTN_0634 Name: xtpF Funciton: Xylan oligosaccharide ABC transporter, permease component 1 Locus tag: CTN_0635 Name: xtpG Funciton: Xylan oligosaccharide ABC transporter, permease component 2 Locus tag: CTN_0636 Name: xtpK Funciton: Xylan oligosaccharide ABC transporter, ATP-binding protein 1 Locus tag: CTN_0637 Name: xtpL Funciton: Xylan oligosaccharide ABC transporter, ATP-binding protein 2 Locus tag: CTN_0638 Name: xtpE Funciton: Xylan oligosaccharide ABC transporter, substrate-binding component Locus tag: CTN_0639 Name: aguA Funciton: Alpha-glucuronidase (EC 3.2.1.139)
	CTN_0633		Transposase, IS605 OrfB family
	CTN_0634	xtpF	Xylan oligosaccharide ABC transporter, permease component 1
	CTN_0635	xtpG	Xylan oligosaccharide ABC transporter, permease component 2
	CTN_0636	xtpK	Xylan oligosaccharide ABC transporter, ATP-binding protein 1
	CTN_0637	xtpL	Xylan oligosaccharide ABC transporter, ATP-binding protein 2
	CTN_0638	xtpE	Xylan oligosaccharide ABC transporter, substrate-binding component
	CTN_0639	aguA	Alpha-glucuronidase (EC 3.2.1.139)

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD