Regulon of UxaR in Thermotoga neapolitana DSM 4359

Properties
Regulator type:	Transcription factor
TF locus tag:	CTN_0233
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Galacturonate utilization; Pectin utilization
Effector:
Regulog:	UxaR - Thermotogales
Statistics of regulated genes:
- Genes	13
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 18 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By TF family - GntR/Others
By pathway - Galacturonate utilization
By pathway - Pectin utilization

Regulated operons
	Locus Tag	Name	Function
Position: -33 Score: 6.4 Sequence: TAAAACATCACATATCT Locus tag: CTN_0237 Name: uxaP Funciton: Predicted galacturonate TRAP transporter, substrate binding subunit Locus tag: CTN_0236 Name: uxaQ Funciton: Predicted galacturonate TRAP transporter, small permease subunit Locus tag: CTN_0235 Name: uxaM Funciton: Predicted galacturonate TRAP transporter, large permease subunit Locus tag: CTN_0234 Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Locus tag: CTN_0233 Name: uxaR Funciton: Regulator of pectin and galacturonate utilization, GntR family Locus tag: CTN_0232 Name: uxaE Funciton: D-tagaturonate epimerase Locus tag: CTN_0231 Name: uxuB2 Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent Locus tag: CTN_0230 Name: gntE Funciton: novel D-mannonate-D-gluconate epimerase Locus tag: CTN_0229 Name: gntK Funciton: Gluconokinase (EC 2.7.1.12)
	CTN_0237	uxaP	Predicted galacturonate TRAP transporter, substrate binding subunit
	CTN_0236	uxaQ	Predicted galacturonate TRAP transporter, small permease subunit
	CTN_0235	uxaM	Predicted galacturonate TRAP transporter, large permease subunit
	CTN_0234	gnd	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
	CTN_0233	uxaR	Regulator of pectin and galacturonate utilization, GntR family
	CTN_0232	uxaE	D-tagaturonate epimerase
	CTN_0231	uxuB2	D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent
	CTN_0230	gntE	novel D-mannonate-D-gluconate epimerase
	CTN_0229	gntK	Gluconokinase (EC 2.7.1.12)
Position: 16 Score: 6.3 Sequence: TGAAATATCACACATCT Locus tag: CTN_0240 Name: uxaX Funciton: Predicted sugar ABC transporter, substrate binding protein Locus tag: CTN_0239 Name: uxaY Funciton: Predicted sugar ABC transporter, permease protein Locus tag: CTN_0238 Name: uxaZ Funciton: Predicted sugar ABC transporter, ATP-binding protein
	CTN_0240	uxaX	Predicted sugar ABC transporter, substrate binding protein
	CTN_0239	uxaY	Predicted sugar ABC transporter, permease protein
	CTN_0238	uxaZ	Predicted sugar ABC transporter, ATP-binding protein
Position: -384 Score: 6.2 Sequence: TTAAACATCAAATATCA Locus tag: CTN_0627 Name: kdgA Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase
	CTN_0627	kdgA	2-dehydro-3-deoxyphosphogluconate aldolase

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