Regulon of HrcA in Thermotoga neapolitana DSM 4359
| Regulator type: | Transcription factor |
| TF locus tag: | CTN_1724 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Thermotogales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermotogales
- By trascription factor - HrcA
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -52
Score: 6.2 Sequence: TTAGCAGTCATGAGTCGAGAGTGCTAA
Locus tag: CTN_0166
Name: groS Funciton: GroES chaperonin
Locus tag: CTN_0165
Name: groS Funciton: GroES chaperonin
Locus tag: CTN_0164
Name: groL Funciton: GroEL chaperonin |
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groS
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GroES chaperonin
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groS
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GroES chaperonin
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groL
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GroEL chaperonin
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Position: -20
Score: 6.4 Sequence: TTATCAATCGATATTGATGAGTGCTAA
Locus tag: CTN_0301
Name: TM0370 Funciton: Predicted RecA-like ATPase, COG0467
Locus tag: CTN_0300
Name: TM0369 Funciton: Conserved hypothetical protein |
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TM0370
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Predicted RecA-like ATPase, COG0467
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TM0369
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Conserved hypothetical protein
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Position: -28
Score: 6.6 Sequence: TTAGCACTCAAAAGAAAGGAGTGCTAA
Locus tag: CTN_1724
Name: hrcA Funciton: Heat shock response regulator, HrcA family
Locus tag: CTN_1725
Name: grpE Funciton: Heat shock protein
Locus tag: CTN_1726
Name: dnaJ Funciton: Chaperone Hsp40 |
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hrcA
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Heat shock response regulator, HrcA family
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grpE
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Heat shock protein
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dnaJ
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Chaperone Hsp40
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Position: -174
Score: 6.2 Sequence: TTATCATTCATAAGTTTCGTTTGCTAT
Locus tag: CTN_0304
Name: dnaK Funciton: Chaperone Hsp70
Locus tag: CTN_0305
Name: hsp20 Funciton: Chaperone Hsp20 |
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dnaK
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Chaperone Hsp70
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hsp20
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Chaperone Hsp20
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Position: -42
Score: 6.3 Sequence: TTATCATTCTTAATAATTAAGTGCTAA
Locus tag: CTN_1702
Name: clpA Funciton: Chaperone protein |
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clpA
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Chaperone protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |