Regulon of HrcA in Thermotoga neapolitana DSM 4359

Properties
Regulator type:	Transcription factor
TF locus tag:	CTN_1724
Regulator family:	HrcA
Regulation mode:	repressor
Biological process:	Heat shock response
Effector:	Heat shock
Regulog:	HrcA - Thermotogales
Statistics of regulated genes:
- Genes	11
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 50 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By trascription factor - HrcA
By TF family - HrcA
By effector - Heat shock
By pathway - Heat shock response

Regulated operons
	Locus Tag	Name	Function
Position: -52 Score: 6.2 Sequence: TTAGCAGTCATGAGTCGAGAGTGCTAA Locus tag: CTN_0166 Name: groS Funciton: GroES chaperonin Locus tag: CTN_0165 Name: groS Funciton: GroES chaperonin Locus tag: CTN_0164 Name: groL Funciton: GroEL chaperonin
	CTN_0166	groS	GroES chaperonin
	CTN_0165	groS	GroES chaperonin
	CTN_0164	groL	GroEL chaperonin
Position: -20 Score: 6.4 Sequence: TTATCAATCGATATTGATGAGTGCTAA Locus tag: CTN_0301 Name: TM0370 Funciton: Predicted RecA-like ATPase, COG0467 Locus tag: CTN_0300 Name: TM0369 Funciton: Conserved hypothetical protein
	CTN_0301	TM0370	Predicted RecA-like ATPase, COG0467
	CTN_0300	TM0369	Conserved hypothetical protein
Position: -28 Score: 6.6 Sequence: TTAGCACTCAAAAGAAAGGAGTGCTAA Locus tag: CTN_1724 Name: hrcA Funciton: Heat shock response regulator, HrcA family Locus tag: CTN_1725 Name: grpE Funciton: Heat shock protein Locus tag: CTN_1726 Name: dnaJ Funciton: Chaperone Hsp40
	CTN_1724	hrcA	Heat shock response regulator, HrcA family
	CTN_1725	grpE	Heat shock protein
	CTN_1726	dnaJ	Chaperone Hsp40
Position: -174 Score: 6.2 Sequence: TTATCATTCATAAGTTTCGTTTGCTAT Locus tag: CTN_0304 Name: dnaK Funciton: Chaperone Hsp70 Locus tag: CTN_0305 Name: hsp20 Funciton: Chaperone Hsp20
	CTN_0304	dnaK	Chaperone Hsp70
	CTN_0305	hsp20	Chaperone Hsp20
Position: -42 Score: 6.3 Sequence: TTATCATTCTTAATAATTAAGTGCTAA Locus tag: CTN_1702 Name: clpA Funciton: Chaperone protein
	CTN_1702	clpA	Chaperone protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD