Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Burkholderia xenovorans LB400

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF BPSL1086 Metabolite transport 2 2
TF BPSL1304 Sugar utilization 2 2
TF BPSS0970 1 1
TF BPSS1200 1 1
TF BglR Beta-glucoside Beta-glucosides utilization 1 1
TF Bphy_2245 Sugar utilization 1 1
TF Bphy_4252 Lactate utilization; Glycolate utilization 4 6
TF Bxe_A4089 4 8
TF Bxe_A4302 1 1
TF Bxe_B1375 1 1
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 8 8
TF CueR Copper ion, (Cu+) Copper resistance 3 3
TF EutR Ectoine utilization 4 5
TF FadP Fatty acid degradation 12 9
TF FdsR Formate Formate oxydation 2 2
TF GabR Gamma-aminobutyric acid Gamma-aminobutyrate utilization 3 2
TF GguR Glucarate utilization; Galactarate utilization 6 9
TF GlcC Glycolate Glycolate utilization 2 4
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 3 3
TF HrcA Heat shock Heat shock response 2 2
TF HutC cis-Urocanic acid Histidine utilization 5 5
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 2
TF LexA DNA damage SOS response 8 9
TF LiuQ Branched-chain amino acid degradation 4 6
TF LiuR Branched-chain amino acid degradation 3 3
TF LldR L-lactate Lactate utilization 2 2
TF MerR Mercury ion, (Hg2+) Mercury resistance 2 2
TF ModE Molybdate Molybdenum homeostasis 3 2
TF ModE2 Molybdate Molybdopterin biosynthesis 2 2
TF NagQ N-acetylglucosamine N-acetylglucosamine utilization 1 1
TF NikR Nickel ion, (Ni2+) Nickel homeostasis 2 2
TF NmlR Diamide Carbonyl stress response 1 1
TF NorR Nitric oxide Nitrosative stress response 2 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NsrR Nitric oxide Nitrosative stress response 3 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 2
TF OapR Amino acid metabolism 1 1
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 3 3
TF PdxW Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 2 2
TF PhnF Phosphonate utilization 3 3
TF PhnR2 2-aminoethylphosphonate 2-aminoethylphosphonate utilization 2 2
TF PsrA Oleate Fatty acid degradation 2 2
TF PtxS 2-keto-D-gluconate 2-ketogluconate utilization 1 1
TF RbsR Ribose Ribose utilization 2 1
TF RutR Uracil Pyrimidine utilization 2 2
TF SdhR Tricarboxylic acid cycle 8 5
TF TauR Taurine Taurine utilization 6 3
TF UraR Uracil Pyrimidine utilization 2 2
TF UreR 2 4
TF YdcR 4 2
TF YrdX 3 3
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 2 2
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 6 5
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 2 1
RNA Glycine Glycine Glycine metabolism 3 6
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
RNA mini-ykkC Multidrug resistance 2 1
RNA sucA Tricarboxylic acid cycle 1 1
RNA ykkC-yxkD Multidrug resistance 2 2
RNA yybP-ykoY 2 2
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