Regulon of FadP in Burkholderia xenovorans LB400

Properties
Regulator type:	Transcription factor
TF locus tag:	Bxe_A4039
Regulator family:	TetR
Regulation mode:
Biological process:	Fatty acid degradation
Effector:
Regulog:	FadP - Burkholderia
Statistics of regulated genes:
- Genes	24
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 63 sites [see more]

Member of regulog collections

By trascription factor - FadP
By taxonomy - Burkholderia
By TF family - TetR
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -102 Score: 5.7 Sequence: TAGAACGATCGTGCTA Locus tag: Bxe_A1362 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	Bxe_A1362	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -37 Score: 5.3 Sequence: TAGCACGACCATTCGA Locus tag: Bxe_A0474 Name: fadD1 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Bxe_A0474	fadD1	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -69 Score: 5.4 Sequence: TGGCACGATCGTTCGA Locus tag: Bxe_A0751 Name: fadD2 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Bxe_A0751	fadD2	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -50 Score: 5.3 Sequence: TAGTACGGCCGTTCGA Locus tag: Bxe_A4039 Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family Locus tag: Bxe_A4038 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: Bxe_A4037 Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Locus tag: Bxe_A4036 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: Bxe_A4035 Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	Bxe_A4039	fadP	Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
	Bxe_A4038	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Bxe_A4037	acdB	Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
	Bxe_A4036	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	Bxe_A4035	echH	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -165 Score: 4.8 Sequence: TTGAACGAGCGTGCTT Locus tag: Bxe_A2274 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: Bxe_A2273 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	Bxe_A2274	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	Bxe_A2273	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Position: -130 Score: 5.6 Sequence: TCGAACGATCGTTCTT Locus tag: Bxe_A4276 Name: nppD Funciton: 2-nitropropane dioxygenase NPD
	Bxe_A4276	nppD	2-nitropropane dioxygenase NPD
Position: -138 Score: 5.8 Sequence: TAGAACGACCGTTCGA Locus tag: Bxe_A0998 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: Bxe_A0999 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: Bxe_A1000 Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Bxe_A0998	etfB	Electron transfer flavoprotein, beta subunit
	Bxe_A0999	etfA	Electron transfer flavoprotein, alpha subunit
	Bxe_A1000	acdH2	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -47 Score: 5.4 Sequence: TTGCACGATCGTGCTA Locus tag: Bxe_A3184 Name: paaH1 Funciton: 3-hydroxybutyryl-CoA dehydrogenase, phenylacetic acid degradation Locus tag: Bxe_A3185 Name: paaG4 Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: Bxe_A3186 Name: null Funciton: Putative phosphoglycerate mutase Locus tag: Bxe_A3187 Name: null Funciton: Phosphotransferase enzyme family protein Locus tag: Bxe_A3188 Name: acdH4 Funciton: Acyl-CoA dehydrogenase domain protein
	Bxe_A3184	paaH1	3-hydroxybutyryl-CoA dehydrogenase, phenylacetic acid degradation
	Bxe_A3185	paaG4	Enoyl-CoA hydratase (EC 4.2.1.17)
	Bxe_A3186		Putative phosphoglycerate mutase
	Bxe_A3187		Phosphotransferase enzyme family protein
	Bxe_A3188	acdH4	Acyl-CoA dehydrogenase domain protein
Position: -61 Score: 5.1 Sequence: ACGAACGACCGTTCAC Locus tag: Bxe_A3193 Name: null Funciton: Conserved hypothetical protein DUF1178 Locus tag: Bxe_A3192 Name: acdQ Funciton: Acyl-CoA dehydrogenase domain protein Locus tag: Bxe_A3191 Name: acdP Funciton: acyl-CoA dehydrogenase domain-containing protein Locus tag: Bxe_A3190 Name: maoC Funciton: Putative (R)-specific enoyl-CoA hydratase, MaoC- like Locus tag: Bxe_A3189 Name: echI Funciton: MaoC domain protein dehydratase
	Bxe_A3193		Conserved hypothetical protein DUF1178
	Bxe_A3192	acdQ	Acyl-CoA dehydrogenase domain protein
	Bxe_A3191	acdP	acyl-CoA dehydrogenase domain-containing protein
	Bxe_A3190	maoC	Putative (R)-specific enoyl-CoA hydratase, MaoC- like
	Bxe_A3189	echI	MaoC domain protein dehydratase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of FadP in Burkholderia xenovorans LB400

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --