Regulon of FadP in Burkholderia xenovorans LB400
| Regulator type: | Transcription factor |
| TF locus tag: | Bxe_A4039 |
| Regulator family: | TetR |
| Regulation mode: | |
| Biological process: | Fatty acid degradation |
| Effector: | |
| Regulog: | FadP - Burkholderia |
| Statistics of regulated genes: | |
| - Genes | 24 |
| - Operons | 9 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - FadP
- By taxonomy - Burkholderia
- By TF family - TetR
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -102
Score: 5.7 Sequence: TAGAACGATCGTGCTA
Locus tag: Bxe_A1362
Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
|||
|
etfD
|
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
|
||
|
Position: -37
Score: 5.3 Sequence: TAGCACGACCATTCGA
Locus tag: Bxe_A0474
Name: fadD1 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
|||
|
fadD1
|
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
|
||
|
Position: -69
Score: 5.4 Sequence: TGGCACGATCGTTCGA
Locus tag: Bxe_A0751
Name: fadD2 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
|||
|
fadD2
|
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
|
||
|
Position: -50
Score: 5.3 Sequence: TAGTACGGCCGTTCGA
Locus tag: Bxe_A4039
Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Locus tag: Bxe_A4038
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Bxe_A4037
Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: Bxe_A4036
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Bxe_A4035
Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) |
|||
|
fadP
|
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
|
||
|
acdH
|
Acyl-CoA dehydrogenase (EC 1.3.99.3)
|
||
|
acdB
|
Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
|
||
|
acdA
|
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
|
||
|
echH
|
Enoyl-CoA hydratase (EC 4.2.1.17)
|
||
|
Position: -165
Score: 4.8 Sequence: TTGAACGAGCGTGCTT
Locus tag: Bxe_A2274
Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: Bxe_A2273
Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) |
|||
|
fadB
|
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
|
||
|
fadA
|
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
|
||
|
Position: -130
Score: 5.6 Sequence: TCGAACGATCGTTCTT
Locus tag: Bxe_A4276
Name: nppD Funciton: 2-nitropropane dioxygenase NPD |
|||
|
nppD
|
2-nitropropane dioxygenase NPD
|
||
|
Position: -138
Score: 5.8 Sequence: TAGAACGACCGTTCGA
Locus tag: Bxe_A0998
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Bxe_A0999
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Bxe_A1000
Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
|||
|
etfB
|
Electron transfer flavoprotein, beta subunit
|
||
|
etfA
|
Electron transfer flavoprotein, alpha subunit
|
||
|
acdH2
|
Acyl-CoA dehydrogenase (EC 1.3.99.3)
|
||
|
Position: -47
Score: 5.4 Sequence: TTGCACGATCGTGCTA
Locus tag: Bxe_A3184
Name: paaH1 Funciton: 3-hydroxybutyryl-CoA dehydrogenase, phenylacetic acid degradation
Locus tag: Bxe_A3185
Name: paaG4 Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Bxe_A3186
Name: null Funciton: Putative phosphoglycerate mutase
Locus tag: Bxe_A3187
Name: null Funciton: Phosphotransferase enzyme family protein
Locus tag: Bxe_A3188
Name: acdH4 Funciton: Acyl-CoA dehydrogenase domain protein |
|||
|
paaH1
|
3-hydroxybutyryl-CoA dehydrogenase, phenylacetic acid degradation
|
||
|
paaG4
|
Enoyl-CoA hydratase (EC 4.2.1.17)
|
||
|
Putative phosphoglycerate mutase
|
|||
|
Phosphotransferase enzyme family protein
|
|||
|
acdH4
|
Acyl-CoA dehydrogenase domain protein
|
||
|
Position: -61
Score: 5.1 Sequence: ACGAACGACCGTTCAC
Locus tag: Bxe_A3193
Name: null Funciton: Conserved hypothetical protein DUF1178
Locus tag: Bxe_A3192
Name: acdQ Funciton: Acyl-CoA dehydrogenase domain protein
Locus tag: Bxe_A3191
Name: acdP Funciton: acyl-CoA dehydrogenase domain-containing protein
Locus tag: Bxe_A3190
Name: maoC Funciton: Putative (R)-specific enoyl-CoA hydratase, MaoC- like
Locus tag: Bxe_A3189
Name: echI Funciton: MaoC domain protein dehydratase |
|||
|
Conserved hypothetical protein DUF1178
|
|||
|
acdQ
|
Acyl-CoA dehydrogenase domain protein
|
||
|
acdP
|
acyl-CoA dehydrogenase domain-containing protein
|
||
|
maoC
|
Putative (R)-specific enoyl-CoA hydratase, MaoC- like
|
||
|
echI
|
MaoC domain protein dehydratase
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |