Profile of regulator FadP in Burkholderia
| Regulator family: | TetR |
| Regulation mode: | |
| Biological process: | Fatty acid degradation |
| Effector: | |
| Regulog: | FadP - Burkholderia |
Member of regulog collections
- By trascription factor - FadP
- By taxonomy - Burkholderia
- By TF family - TetR
- By pathway - Fatty acid degradation
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Burkholderia pseudomallei K96243 | |||||
| BPSL0328 | nppD | -154 | 5.2 | TGGCACGACCGTTCGT | |
| BPSL1424 | fadB | -148 | 5.4 | TTGAACGACCGTTCTT | |
| BPSL2500 | etfB | -147 | 5.6 | TAGAACGACCGTTCGC | |
| BPSL1961 | etfD | -104 | 5.7 | TAGAACGATCGTGCTA | |
| BPSL1227 | null | -60 | 5.4 | TAGCACGGTCGTTCAA | |
| BPSL3037 | fadD1 | -39 | 5.3 | TAGCACGACCATTCGA | |
| BPSL0647 | fadP | -52 | 5.3 | TAGTACGGCCGTTCGA | |
| Burkholderia mallei ATCC 23344 | |||||
| BMA1438 | fadB | -148 | 5.4 | TTGAACGACCGTTCTT | |
| BMA0411 | etfB | -147 | 5.6 | TAGAACGACCGTTCGC | |
| BMA1116 | etfD | -104 | 5.7 | TAGAACGATCGTGCTA | |
| BMA1813 | null | -60 | 5.4 | TAGCACGGTCGTTCAA | |
| BMA0196 | fadP | -52 | 5.3 | TAGTACGGCCGTTCGA | |
| Burkholderia sp. 383 | |||||
| Bcep18194_A6315 | nppD | -123 | 5.5 | TCGCACGATCGTTCGT | |
| Bcep18194_A5207 | fadB | -115 | 5.3 | TTGAACGACCGTGCTT | |
| Bcep18194_A6049 | fadP | -52 | 5.3 | TAGTACGGCCGTTCGA | |
| Bcep18194_A4175 | etfB | -144 | 5.6 | TAGAACGACCGTTCGC | |
| Bcep18194_B1909 | null | -194 | 5.2 | CAGAACGGTCGTTCGA | |
| Bcep18194_A4606 | etfD | -104 | 5.7 | TAGAACGATCGTGCTA | |
| Bcep18194_A3633 | fadD1 | -39 | 5.3 | TAGCACGACCATTCGA | |
| Bcep18194_A5890 | fadD2 | -59 | 5.2 | TGGCACGATCGTTCGC | |
| Bcep18194_A5561 | null | -60 | 5.4 | TAGCACGATCGTTCAC | |
| Bcep18194_A4473 | acdH3 | -87 | 5.7 | TAGAACGACCGTGCTA | |
| Burkholderia cepacia AMMD | |||||
| Bamb_3013 | nppD | -136 | 5.5 | TCGCACGACCGTTCGT | |
| Bamb_1894 | fadB | -116 | 5.3 | TTGAACGACCGTGCTT | |
| Bamb_2773 | fadP | -51 | 5.3 | TAGTACGGCCGTTCGA | |
| Bamb_3540 | null | -196 | 4.8 | CAGAACGGCCATTCGA | |
| Bamb_0938 | etfB | -144 | 5.6 | TAGAACGACCGTTCGC | |
| Bamb_1346 | etfD | -104 | 5.7 | TAGAACGATCGTGCTA | |
| Bamb_0451 | fadD1 | -39 | 5.3 | TAGCACGACCATTCGA | |
| Bamb_2271 | null | -62 | 5.4 | TAGCACGATCGTTCAC | |
| Bamb_2606 | fadD2 | -59 | 5.2 | TGGCACGATCGTTCGC | |
| Burkholderia vietnamiensis G4 | |||||
| Bcep1808_2828 | fadP | -52 | 5.3 | TAGTACGGCCGTTCGA | |
| Bcep1808_3054 | nppD | -131 | 5.5 | TCGCACGATCGTTCGT | |
| Bcep1808_2651 | fadD2 | -61 | 5.2 | TGGCACGATCGTTCGC | |
| Bcep1808_1838 | fadB | -116 | 5.4 | TTGAACGACCGTTCTT | |
| Bcep1808_0983 | etfB | -140 | 5.6 | TAGAACGATCGTTCGC | |
| Bcep1808_1426 | etfD | -104 | 5.7 | TAGAACGATCGTGCTA | |
| Bcep1808_0523 | fadD1 | -39 | 5.3 | TAGCACGACCATTCGA | |
| Bcep1808_2318 | null | -60 | 5.4 | TAGCACGGTCGTTCAA | |
| Burkholderia glumae BGR1 | |||||
| bglu_1g30730 | fadP | -56 | 5.3 | TAGTACGGCCGTTCGA | |
| bglu_1g13710 | fadB | -135 | 5.5 | TTGAACGATCGTTCGT | |
| bglu_1g08950 | etfB | -143 | 5.6 | TAGAACGACCGTTCGC | |
| bglu_1g32630 | nppD | -156 | 5.5 | TCGCACGACCGTTCGT | |
| bglu_1g21610 | etfD | -104 | 5.7 | TAGAACGATCGTGCTA | |
| bglu_1g04510 | fadD1 | -39 | 5.3 | TAGCACGACCATTCGA | |
| bglu_1g25780 | null | -61 | 5.6 | TAGCACGACCGTTCTT | |
| Burkholderia xenovorans LB400 | |||||
| Bxe_A2274 | fadB | -165 | 4.8 | TTGAACGAGCGTGCTT | |
| Bxe_A4039 | fadP | -50 | 5.3 | TAGTACGGCCGTTCGA | |
| Bxe_A0998 | etfB | -138 | 5.8 | TAGAACGACCGTTCGA | |
| Bxe_A4276 | nppD | -130 | 5.6 | TCGAACGATCGTTCTT | |
| Bxe_A1362 | etfD | -102 | 5.7 | TAGAACGATCGTGCTA | |
| Bxe_A0751 | fadD2 | -69 | 5.4 | TGGCACGATCGTTCGA | |
| Bxe_A3193 | null | -61 | 5.1 | ACGAACGACCGTTCAC | |
| Bxe_A3184 | paaH1 | -47 | 5.4 | TTGCACGATCGTGCTA | |
| Bxe_A0474 | fadD1 | -37 | 5.3 | TAGCACGACCATTCGA | |
| Burkholderia phymatum STM815 | |||||
| Bphy_1028 | fadB | -131 | 5.3 | TTGAACGATCGTGCTT | |
| Bphy_0384 | fadP | -50 | 5.2 | TGGTACGACCGTTCGA | |
| Bphy_0762 | etfB | -139 | 5.5 | TAGCACGACCGTTCGC | |
| Bphy_0157 | nppD | -117 | 5.6 | TCGAACGATCGTTCTT | |
| Bphy_1567 | etfD | -102 | 5.7 | TAGAACGATCGTGCTA | |
| Bphy_0524 | fadD2 | -112 | 5.4 | TGGCACGATCGTTCGA | |
| Bphy_1993 | null | -60 | 4.9 | GCGAACGACCGTTCAT | |
| Bphy_2685 | fadD1 | -37 | 5.3 | TAGCACGACCATTCGA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |