Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator FadP in Burkholderia

Properties
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Regulog: FadP - Burkholderia
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Burkholderia pseudomallei K96243
BPSL0328 nppD -154 5.2 TGGCACGACCGTTCGT
BPSL1424 fadB -148 5.4 TTGAACGACCGTTCTT
BPSL2500 etfB -147 5.6 TAGAACGACCGTTCGC
BPSL1961 etfD -104 5.7 TAGAACGATCGTGCTA
BPSL1227 null -60 5.4 TAGCACGGTCGTTCAA
BPSL3037 fadD1 -39 5.3 TAGCACGACCATTCGA
BPSL0647 fadP -52 5.3 TAGTACGGCCGTTCGA
Burkholderia mallei ATCC 23344
BMA1438 fadB -148 5.4 TTGAACGACCGTTCTT
BMA0411 etfB -147 5.6 TAGAACGACCGTTCGC
BMA1116 etfD -104 5.7 TAGAACGATCGTGCTA
BMA1813 null -60 5.4 TAGCACGGTCGTTCAA
BMA0196 fadP -52 5.3 TAGTACGGCCGTTCGA
Burkholderia sp. 383
Bcep18194_A6315 nppD -123 5.5 TCGCACGATCGTTCGT
Bcep18194_A5207 fadB -115 5.3 TTGAACGACCGTGCTT
Bcep18194_A6049 fadP -52 5.3 TAGTACGGCCGTTCGA
Bcep18194_A4175 etfB -144 5.6 TAGAACGACCGTTCGC
Bcep18194_B1909 null -194 5.2 CAGAACGGTCGTTCGA
Bcep18194_A4606 etfD -104 5.7 TAGAACGATCGTGCTA
Bcep18194_A3633 fadD1 -39 5.3 TAGCACGACCATTCGA
Bcep18194_A5890 fadD2 -59 5.2 TGGCACGATCGTTCGC
Bcep18194_A5561 null -60 5.4 TAGCACGATCGTTCAC
Bcep18194_A4473 acdH3 -87 5.7 TAGAACGACCGTGCTA
Burkholderia cepacia AMMD
Bamb_3013 nppD -136 5.5 TCGCACGACCGTTCGT
Bamb_1894 fadB -116 5.3 TTGAACGACCGTGCTT
Bamb_2773 fadP -51 5.3 TAGTACGGCCGTTCGA
Bamb_3540 null -196 4.8 CAGAACGGCCATTCGA
Bamb_0938 etfB -144 5.6 TAGAACGACCGTTCGC
Bamb_1346 etfD -104 5.7 TAGAACGATCGTGCTA
Bamb_0451 fadD1 -39 5.3 TAGCACGACCATTCGA
Bamb_2271 null -62 5.4 TAGCACGATCGTTCAC
Bamb_2606 fadD2 -59 5.2 TGGCACGATCGTTCGC
Burkholderia vietnamiensis G4
Bcep1808_2828 fadP -52 5.3 TAGTACGGCCGTTCGA
Bcep1808_3054 nppD -131 5.5 TCGCACGATCGTTCGT
Bcep1808_2651 fadD2 -61 5.2 TGGCACGATCGTTCGC
Bcep1808_1838 fadB -116 5.4 TTGAACGACCGTTCTT
Bcep1808_0983 etfB -140 5.6 TAGAACGATCGTTCGC
Bcep1808_1426 etfD -104 5.7 TAGAACGATCGTGCTA
Bcep1808_0523 fadD1 -39 5.3 TAGCACGACCATTCGA
Bcep1808_2318 null -60 5.4 TAGCACGGTCGTTCAA
Burkholderia glumae BGR1
bglu_1g30730 fadP -56 5.3 TAGTACGGCCGTTCGA
bglu_1g13710 fadB -135 5.5 TTGAACGATCGTTCGT
bglu_1g08950 etfB -143 5.6 TAGAACGACCGTTCGC
bglu_1g32630 nppD -156 5.5 TCGCACGACCGTTCGT
bglu_1g21610 etfD -104 5.7 TAGAACGATCGTGCTA
bglu_1g04510 fadD1 -39 5.3 TAGCACGACCATTCGA
bglu_1g25780 null -61 5.6 TAGCACGACCGTTCTT
Burkholderia xenovorans LB400
Bxe_A2274 fadB -165 4.8 TTGAACGAGCGTGCTT
Bxe_A4039 fadP -50 5.3 TAGTACGGCCGTTCGA
Bxe_A0998 etfB -138 5.8 TAGAACGACCGTTCGA
Bxe_A4276 nppD -130 5.6 TCGAACGATCGTTCTT
Bxe_A1362 etfD -102 5.7 TAGAACGATCGTGCTA
Bxe_A0751 fadD2 -69 5.4 TGGCACGATCGTTCGA
Bxe_A3193 null -61 5.1 ACGAACGACCGTTCAC
Bxe_A3184 paaH1 -47 5.4 TTGCACGATCGTGCTA
Bxe_A0474 fadD1 -37 5.3 TAGCACGACCATTCGA
Burkholderia phymatum STM815
Bphy_1028 fadB -131 5.3 TTGAACGATCGTGCTT
Bphy_0384 fadP -50 5.2 TGGTACGACCGTTCGA
Bphy_0762 etfB -139 5.5 TAGCACGACCGTTCGC
Bphy_0157 nppD -117 5.6 TCGAACGATCGTTCTT
Bphy_1567 etfD -102 5.7 TAGAACGATCGTGCTA
Bphy_0524 fadD2 -112 5.4 TGGCACGATCGTTCGA
Bphy_1993 null -60 4.9 GCGAACGACCGTTCAT
Bphy_2685 fadD1 -37 5.3 TAGCACGACCATTCGA
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