Regulon of GguR in Burkholderia xenovorans LB400

Properties
Regulator type:	Transcription factor
TF locus tag:	Bxe_B1804
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucarate utilization; Galactarate utilization
Effector:
Regulog:	GguR - Burkholderia
Statistics of regulated genes:
- Genes	12
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 67 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By trascription factor - GguR
By TF family - GntR/Others
By pathway - Glucarate utilization
By pathway - Galactarate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -178 Score: 5.1 Sequence: ACGTCATCCTACAACAT Position: -83 Score: 4.8 Sequence: TTGTTGTACGATGACGT Locus tag: Bxe_B1802 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: Bxe_B1803 Name: gudP Funciton: D-glucarate permease
	Bxe_B1802	kdgD	5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
	Bxe_B1803	gudP	D-glucarate permease
Position: -159 Score: 4.8 Sequence: ACGTCATCGTACAACAA Position: -64 Score: 5.1 Sequence: ATGTTGTAGGATGACGT Locus tag: Bxe_B1801 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: Bxe_B1800 Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) Locus tag: Bxe_B1799 Name: uxuL Funciton: Predicted glucuronolactone/galactarolactone lactonase
	Bxe_B1801	garD	D-galactarate dehydratase (EC 4.2.1.42)
	Bxe_B1800	udh	Uronate dehydrogenase (EC 1.1.1.203)
	Bxe_B1799	uxuL	Predicted glucuronolactone/galactarolactone lactonase
Position: -160 Score: 4.4 Sequence: AAGTCGTCGTATATCTA Position: -48 Score: 4.9 Sequence: ATGTTGTAGGATGACCT Locus tag: Bxe_B1805 Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
	Bxe_B1805	kgsD	Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Position: -70 Score: 4.8 Sequence: CAGTCATCAGACGACGG Locus tag: Bxe_B1804 Name: gguR Funciton: Predicted D-glucarate or D-galactorate utilization regulator, GntR family
	Bxe_B1804	gguR	Predicted D-glucarate or D-galactorate utilization regulator, GntR family
Position: -322 Score: 5.2 Sequence: ATGTCGTCGTACAACAT Locus tag: Bxe_B1798 Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component Locus tag: Bxe_B1797 Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component Locus tag: Bxe_B1796 Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component Locus tag: Bxe_B1795 Name: omp Funciton: Outer membrane protein (porin)
	Bxe_B1798	uxuP	Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
	Bxe_B1797	uxuQ	Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
	Bxe_B1796	uxuM	Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
	Bxe_B1795	omp	Outer membrane protein (porin)
Position: -106 Score: 5 Sequence: CTGTCATCGTACAACAT Locus tag: Bxe_B0539 Name: gudD Funciton: Glucarate dehydratase (EC 4.2.1.40)
	Bxe_B0539	gudD	Glucarate dehydratase (EC 4.2.1.40)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD