Regulon of Glycine in Burkholderia xenovorans LB400
| Regulator type: | RNA regulatory element |
| Name: | Glycine |
| RFAM: | RF00504 |
| Regulation mode: | |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Regulog: | Glycine - Burkholderia |
| Under regulation: | |
| - Genes | 7 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Burkholderia
- By RNA motif - Glycine
- By effector - Glycine
- By pathway - Glycine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -330
Score: 38.7 Sequence: CGTACGCGTCGGGAG...
Position: -195
Score: 37.8 Sequence: TTTCGCACTCTGGAG...
Locus tag: Bxe_A0056
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bxe_A0055
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Bxe_A0054
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Bxe_A0053
Name: null Funciton: hypothetical protein
Locus tag: Bxe_A0052
Name: sdaA Funciton: L-serine dehydratase (EC 4.3.1.17) |
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gcvT
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Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
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gcvH
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Glycine cleavage system H protein
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gcvP
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Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
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hypothetical protein
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sdaA
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L-serine dehydratase (EC 4.3.1.17)
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Position: -276
Score: 62.9 Sequence: AATGCAGCGCGGGAG...
Position: -181
Score: 35.1 Sequence: ATCTGGAGAGCGGCG...
Locus tag: Bxe_B1348
Name: dadA Funciton: D-amino acid dehydrogenase small subunit (EC 1.4.99.1) |
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dadA
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D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
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Position: -228
Score: 48.8 Sequence: TGAATCGCGCGGAAG...
Position: -139
Score: 50.9 Sequence: CAGGACAATCTGGAG...
Locus tag: Bxe_C0404
Name: dadA Funciton: D-amino acid dehydrogenase small subunit (EC 1.4.99.1) |
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dadA
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D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |