Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Glycine in Burkholderia xenovorans LB400

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Regulog: Glycine - Burkholderia
Under regulation:
- Genes 7
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -330
Score: 38.7
Sequence: CGTACGCGTCGGGAG...
Position: -195
Score: 37.8
Sequence: TTTCGCACTCTGGAG...
Locus tag: Bxe_A0056
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bxe_A0055
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Bxe_A0054
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Bxe_A0053
Name: null
Funciton: hypothetical protein
Locus tag: Bxe_A0052
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
gcvT
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH
Glycine cleavage system H protein
gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
hypothetical protein
sdaA
L-serine dehydratase (EC 4.3.1.17)

Position: -276
Score: 62.9
Sequence: AATGCAGCGCGGGAG...
Position: -181
Score: 35.1
Sequence: ATCTGGAGAGCGGCG...
Locus tag: Bxe_B1348
Name: dadA
Funciton: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
dadA
D-amino acid dehydrogenase small subunit (EC 1.4.99.1)

Position: -228
Score: 48.8
Sequence: TGAATCGCGCGGAAG...
Position: -139
Score: 50.9
Sequence: CAGGACAATCTGGAG...
Locus tag: Bxe_C0404
Name: dadA
Funciton: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
dadA
D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD