Regulon of SdhR in Burkholderia xenovorans LB400

Properties
Regulator type:	Transcription factor
TF locus tag:	Bxe_B2896
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Burkholderia
Statistics of regulated genes:
- Genes	12
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 34 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -137 Score: 5.6 Sequence: CGACGACTCTTATATAAGACATAAGA Locus tag: Bxe_B1533 Name: acnB Funciton: Aconitate hydratase 2 (EC 4.2.1.3)
	Bxe_B1533	acnB	Aconitate hydratase 2 (EC 4.2.1.3)
Position: -261 Score: 5.1 Sequence: CGTCAGGTCATCTATAAGACATCTGT Locus tag: Bxe_B0532 Name: icd2 Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
	Bxe_B0532	icd2	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Position: -217 Score: 5.9 Sequence: CTCGTTGTCTTATATAAGATATAAGA Locus tag: Bxe_A0797 Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
	Bxe_A0797	icd	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Position: -78 Score: 7.6 Sequence: TCTTATGTCTTATATAAGACATAACT Locus tag: Bxe_B2896 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Bxe_B2895 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Bxe_B2894 Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein Locus tag: Bxe_B2893 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Bxe_B2892 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Bxe_B2891 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Bxe_B2890 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	Bxe_B2896	sdhR	Transcriptional regulator of TCA cycle, GntR family
	Bxe_B2895	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	Bxe_B2894	sdhD	Succinate dehydrogenase hydrophobic membrane anchor protein
	Bxe_B2893	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	Bxe_B2892	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	Bxe_B2891	COG2938	succinate dehydrogenase iron-sulfur subunit
	Bxe_B2890	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -62 Score: 7.6 Sequence: AGTTATGTCTTATATAAGACATAAGA Locus tag: Bxe_B2897 Name: null Funciton: hypothetical protein Locus tag: Bxe_B2898 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	Bxe_B2897		hypothetical protein
	Bxe_B2898	mdh	Malate dehydrogenase (EC 1.1.1.37)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD