Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator SdhR in Burkholderia

Properties
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Regulog: SdhR - Burkholderia
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Burkholderia cepacia AMMD
Bamb_5692 acnB -150 6 CCCCAACTCTTATATAAGACATAAGA
Bamb_2572 icd -184 7.1 TCATCTGTCTTATATAAGACATAAGG
Bamb_3309 mdh -245 7.4 ACATCTGTCTTATATAAGACATATGA
Bamb_3310 sdhR -69 7.4 TCATATGTCTTATATAAGACAGATGT
Bamb_3879 aceA -135 6 TCTTATGTCTTATATAAGAGTTGGTC
Burkholderia glumae BGR1
bglu_2g08210 mdh -244 7.4 ACATCTGTCTTATATAAGACATATGA
bglu_1g28920 icd -136 6.4 TCTTTTGTCTTATATAAGACTTGATG
bglu_2g14740 acnB -136 6.7 TCTCAACTCTTATATAAGATATAAGA
bglu_2g08220 sdhR -69 7.4 TCATATGTCTTATATAAGACAGATGT
Burkholderia mallei ATCC 23344
BMAA1751 mdh -245 7.5 ACATCTGTCTTATATAAGACATAAGA
BMA0486 icd -175 6.3 TCTTTTGTCTTATATAAGACTTGCGC
BMAA1750 sdhR 119 7.5 TCTTATGTCTTATATAAGACAGATGT
Burkholderia phymatum STM815
Bphy_0565 icd -262 6.2 GATCCTCTCTTATATAAGACATAGGA
Bphy_4359 null -39 7.6 AGTTATGTCTTATATAAGACATAAGA
Bphy_4360 sdhR -78 7.6 TCTTATGTCTTATATAAGACATAACT
Bphy_5855 acnB -137 6.1 AACCAACTCTTATATAAGACATAAGA
Burkholderia pseudomallei K96243
BPSS1722 mdh -245 7.5 ACATCTGTCTTATATAAGACATAAGA
BPSL0896 icd -175 6.3 TCTTTTGTCTTATATAAGACTTGCGC
BPSS1721 sdhR -79 7.5 TCTTATGTCTTATATAAGACAGATGT
Burkholderia sp. 383
Bcep18194_B1125 acnB -139 5.5 CTCCAACTCTTATATAAGACATAAGA
Bcep18194_A5856 icd -186 7.1 TCCTCTGTCTTATATAAGACATAAGT
Bcep18194_B2154 mdh -245 7.4 ACATCTGTCTTATATAAGACATATGA
Bcep18194_B2153 sdhR -69 7.4 TCATATGTCTTATATAAGACAGATGT
Bcep18194_B0610 aceA -135 6.8 TCTTATGTCTTATATAAGACATCGCC
Burkholderia vietnamiensis G4
Bcep1808_5672 acnB -149 6.1 AACCAACTCTTATATAAGACATAAGA
Bcep1808_2602 icd -184 6.8 TCCTCTGTCTTATATAAGACATAAGG
Bcep1808_4408 mdh -246 7.4 ACATCTGTCTTATATAAGACATATGA
Bcep1808_4409 sdhR -69 7.4 TCATATGTCTTATATAAGACAGATGT
Bcep1808_4997 aceA -135 5.9 TCTTATGTCTTATATAAGAGTTGGCC
Burkholderia xenovorans LB400
Bxe_A0797 icd -217 5.9 CTCGTTGTCTTATATAAGATATAAGA
Bxe_B0532 icd2 -261 5.1 CGTCAGGTCATCTATAAGACATCTGT
Bxe_B2897 null -62 7.6 AGTTATGTCTTATATAAGACATAAGA
Bxe_B1533 acnB -137 5.6 CGACGACTCTTATATAAGACATAAGA
Bxe_B2896 sdhR -78 7.6 TCTTATGTCTTATATAAGACATAACT
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