Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LiuQ in Burkholderia xenovorans LB400

Properties
Regulator type: Transcription factor
TF locus tag: Bxe_A1393, Bxe_B0959
Regulator family: TetR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuQ - Burkholderia
Statistics of regulated genes:
- Genes 9
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 32 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -126
Score: 5.4
Sequence: TTGAGTATCACTCAG
Locus tag: Bxe_B0959
Name: liuQ1
Funciton: Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family
liuQ1
Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family

Position: -139
Score: 5.2
Sequence: TTGAGTCTAGCTCAA
Position: -53
Score: 5
Sequence: ATGAGCTAAACTCAA
Locus tag: Bxe_A1394
Name: atuB
Funciton: Short-chain dehydrogenase/reductase SDR
Locus tag: Bxe_A1395
Name: acsA
Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Locus tag: Bxe_A1396
Name: null
Funciton: Transcriptional regulator, AsnC family
atuB
Short-chain dehydrogenase/reductase SDR
acsA
Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Transcriptional regulator, AsnC family

Position: -186
Score: 5.4
Sequence: CTGAGTGATACTCAA
Locus tag: Bxe_B0960
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Bxe_B0961
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Bxe_B0962
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Bxe_B0963
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuA
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
liuB
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
liuC
Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
liuD
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)

Position: -136
Score: 5
Sequence: TTGAGTTTAGCTCAT
Position: -50
Score: 5.2
Sequence: TTGAGCTAGACTCAA
Locus tag: Bxe_A1393
Name: liuQ2
Funciton: Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family
liuQ2
Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD