Regulon of LiuQ in Burkholderia xenovorans LB400

Properties
Regulator type:	Transcription factor
TF locus tag:	Bxe_A1393, Bxe_B0959
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuQ - Burkholderia
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 32 sites [see more]

Member of regulog collections

By trascription factor - LiuQ
By taxonomy - Burkholderia
By TF family - TetR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -126 Score: 5.4 Sequence: TTGAGTATCACTCAG Locus tag: Bxe_B0959 Name: liuQ1 Funciton: Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family
	Bxe_B0959	liuQ1	Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family
Position: -139 Score: 5.2 Sequence: TTGAGTCTAGCTCAA Position: -53 Score: 5 Sequence: ATGAGCTAAACTCAA Locus tag: Bxe_A1394 Name: atuB Funciton: Short-chain dehydrogenase/reductase SDR Locus tag: Bxe_A1395 Name: acsA Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1) Locus tag: Bxe_A1396 Name: null Funciton: Transcriptional regulator, AsnC family
	Bxe_A1394	atuB	Short-chain dehydrogenase/reductase SDR
	Bxe_A1395	acsA	Acetyl-coenzyme A synthetase (EC 6.2.1.1)
	Bxe_A1396		Transcriptional regulator, AsnC family
Position: -186 Score: 5.4 Sequence: CTGAGTGATACTCAA Locus tag: Bxe_B0960 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: Bxe_B0961 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: Bxe_B0962 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: Bxe_B0963 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	Bxe_B0960	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Bxe_B0961	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	Bxe_B0962	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	Bxe_B0963	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Position: -136 Score: 5 Sequence: TTGAGTTTAGCTCAT Position: -50 Score: 5.2 Sequence: TTGAGCTAGACTCAA Locus tag: Bxe_A1393 Name: liuQ2 Funciton: Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family
	Bxe_A1393	liuQ2	Predicted transcriptional regulator LiuQ of leucine degradation pathway, TetR family

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