Profile of regulator LiuQ in Burkholderia
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Regulog: | LiuQ - Burkholderia |
Member of regulog collections
- By trascription factor - LiuQ
- By taxonomy - Burkholderia
- By TF family - TetR
- By pathway - Branched-chain amino acid degradation
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Burkholderia pseudomallei K96243 | |||||
| BPSS1448 | liuA | -155 | 5.3 | CTGAGTGTCGCTCAA | |
| BPSS1448 | liuA | -55 | 5.2 | TTGAGCAAGACTCAA | |
| BPSS1449 | liuQ | -167 | 5.2 | TTGAGTCTTGCTCAA | |
| BPSS1449 | liuQ | -67 | 5.3 | TTGAGCGACACTCAG | |
| Burkholderia mallei ATCC 23344 | |||||
| BMAA0802 | liuA | -155 | 5.3 | CTGAGTGTTGCTCAA | |
| BMAA0802 | liuA | -55 | 5.2 | TTGAGCAAGACTCAA | |
| BMAA0801 | liuQ | -167 | 5.2 | TTGAGTCTTGCTCAA | |
| BMAA0801 | liuQ | -67 | 5.3 | TTGAGCAACACTCAG | |
| Burkholderia sp. 383 | |||||
| Bcep18194_B0423 | liuA | -94 | 5.4 | CTGAGTGTCACTCAA | |
| Bcep18194_B0423 | liuA | 7 | 5.2 | TTGAGCGAAACTCAG | |
| Bcep18194_B0422 | liuQ | -129 | 5.2 | CTGAGTTTCGCTCAA | |
| Bcep18194_B0422 | liuQ | -28 | 5.4 | TTGAGTGACACTCAG | |
| Burkholderia cepacia AMMD | |||||
| Bamb_4588 | liuA | -158 | 5.4 | CTGAGTATCACTCAA | |
| Bamb_4588 | liuA | -56 | 5.2 | TTGAGCGAAACTCAG | |
| Bamb_4589 | liuQ | -28 | 5.4 | TTGAGTGATACTCAG | |
| Bamb_4589 | liuQ | -130 | 5.2 | CTGAGTTTCGCTCAA | |
| Burkholderia vietnamiensis G4 | |||||
| Bcep1808_3495 | liuA | -156 | 5.4 | CTGAGTGTCACTCAA | |
| Bcep1808_3495 | liuA | -54 | 5.2 | TTGAGCGAAACTCAG | |
| Bcep1808_3496 | liuQ | -131 | 5.2 | CTGAGTTTCGCTCAA | |
| Bcep1808_3496 | liuQ | -29 | 5.4 | TTGAGTGACACTCAG | |
| Burkholderia glumae BGR1 | |||||
| bglu_2g11310 | liuQ | -175 | 5 | CTGAGTTTTGCTCAG | |
| bglu_2g11310 | liuQ | -74 | 5.6 | TTGAGTGACACTCAA | |
| bglu_2g11300 | liuA | -172 | 5.6 | TTGAGTGTCACTCAA | |
| bglu_2g11300 | liuA | -71 | 5 | CTGAGCAAAACTCAG | |
| Burkholderia xenovorans LB400 | |||||
| Bxe_A1394 | atuB | -139 | 5.2 | TTGAGTCTAGCTCAA | |
| Bxe_A1394 | atuB | -53 | 5 | ATGAGCTAAACTCAA | |
| Bxe_B0960 | liuA | -186 | 5.4 | CTGAGTGATACTCAA | |
| Bxe_A1393 | liuQ2 | -136 | 5 | TTGAGTTTAGCTCAT | |
| Bxe_A1393 | liuQ2 | -50 | 5.2 | TTGAGCTAGACTCAA | |
| Bxe_B0959 | liuQ1 | -126 | 5.4 | TTGAGTATCACTCAG | |
| Burkholderia phymatum STM815 | |||||
| Bphy_3562 | liuA | -210 | 5.6 | TTGAGTGACACTCAA | |
| Bphy_3563 | liuQ | -104 | 5.6 | TTGAGTGTCACTCAA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |