Regulog Rex - Thermotogales
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Thermotogae |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermotogales
- By trascription factor - Rex
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Genome | Genes | Operons |
|---|---|---|
| Thermotoga maritima MSB8 | 39 | 12 |
| Thermotoga sp. RQ2 | 32 | 13 |
| Thermotoga neapolitana DSM 4359 | 32 | 11 |
| Thermotoga petrophila RKU-1 | 40 | 13 |
| Thermotoga naphthophila RKU-10 | 30 | 12 |
| Thermotoga lettingae TMO | 23 | 5 |
| Thermosipho africanus TCF52B | 16 | 7 |
| Thermosipho melanesiensis BI429 | 19 | 7 |
| Fervidobacterium nodosum Rt17-B1 | 18 | 7 |
| Petrotoga mobilis SJ95 | 11 | 4 |
| Thermotogales bacterium TBF 19.5.1 | 12 | 4 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| TM1586 |
*
Thermotoga maritima MSB8 Site: position = -177 score = 4.8716 sequence = GAGTAAAATATTTCACAA Gene: TM1586: Putative oxidoreductase, COG0778 |
*
Thermotoga sp. RQ2 Site: position = -177 score = 4.8716 sequence = GAGTAAAATATTTCACAA Gene: TRQ2_1249: Putative oxidoreductase, COG0778 |
|
*
Thermotoga petrophila RKU-1 Site: position = -177 score = 4.8716 sequence = GAGTAAAATATTTCACAA Gene: Tpet_1206: Putative oxidoreductase, COG0778 |
*
Thermotoga naphthophila RKU-10 Site: position = -177 score = 4.8716 sequence = GAGTAAAATATTTCACAA Gene: Tnap_1222: Putative oxidoreductase, COG0778 |
|
|
|
|
|
|
Putative oxidoreductase, COG0778 |
| gckA |
Gene: TM1585: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
Gene: TRQ2_1248: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
Gene: CTN_1169: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
Gene: Tpet_1207: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
Gene: Tnap_1223: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
Gene: Tlet_1724: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
Gene: THA_302: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
Gene: Tmel_0085: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
Gene: Fnod_1253: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
Gene: Pmob_0534: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
Gene: Kole_1768: D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
D-glycerate 2-kinase (EC 2.7.1.-), GK-II family |
| CRON 2. | ||||||||||||
| TM0179 |
*
Thermotoga maritima MSB8 Site: position = -30 score = 4.62536 sequence = TTGTTATAATAGTAACAA Gene: TM0179: hypothetical protein |
*
Thermotoga sp. RQ2 Site: position = -30 score = 4.62536 sequence = TTGTTATAATAGTAACAA Gene: TRQ2_0769: hypothetical protein |
*
Thermotoga neapolitana DSM 4359 Site: position = -30 score = 4.39653 sequence = TTGTTATAATGATATCAA Gene: CTN_0508: hypothetical protein |
*
Thermotoga petrophila RKU-1 Site: position = -30 score = 4.62536 sequence = TTGTTATAATAGTAACAA Gene: Tpet_0745: hypothetical protein |
*
Thermotoga naphthophila RKU-10 Site: position = -30 score = 4.62536 sequence = TTGTTATAATAGTAACAA Gene: Tnap_0810: hypothetical protein |
Gene: Tlet_0873: hypothetical protein |
*
Thermosipho africanus TCF52B Site: position = -35 score = 4.88149 sequence = TTGTGAATTTTTGCACTA Gene: THA_713: hypothetical protein |
Gene: Tmel_0415: hypothetical protein |
*
Fervidobacterium nodosum Rt17-B1 Site: position = -86 score = 4.60494 sequence = TAGTGAAAAACTTGACAA Gene: Fnod_0241: hypothetical protein |
|
Gene: Kole_0974: hypothetical protein |
hypothetical protein |
| CRON 3. | ||||||||||||
| cas6 |
*
Thermotoga maritima MSB8 Site: position = -40 score = 4.90924 sequence = ATGATAAAATTATCACAA Gene: TM1814: CRISPR/Cas system-associated RAMP superfamily protein Cas6 |
*
Thermotoga sp. RQ2 Site: position = -40 score = 4.90924 sequence = ATGATAAAATTATCACAA Gene: TRQ2_1007: CRISPR/Cas system-associated RAMP superfamily protein Cas6 |
*
Thermotoga neapolitana DSM 4359 Site: position = 117 score = 4.90924 sequence = aTGatAAAATTaTCACAA Gene: CTN_0700: CRISPR/Cas system-associated RAMP superfamily protein Cas6 |
*
Thermotoga petrophila RKU-1 Site: position = -40 score = 4.90924 sequence = ATGATAAAATTATCACAA Gene: Tpet_1099: CRISPR/Cas system-associated RAMP superfamily protein Cas6 |
*
Thermotoga naphthophila RKU-10 Site: position = -40 score = 4.90924 sequence = ATGATAAAATTATCACAA Gene: Tnap_1013: CRISPR/Cas system-associated RAMP superfamily protein Cas6 |
|
|
|
|
|
|
CRISPR/Cas system-associated RAMP superfamily protein Cas6 |
| TM1813 |
Gene: TM1813: hypothetical protein |
|
|
|
|
|
|
|
|
|
|
hypothetical protein |
| csx1 |
Gene: TM1812: CRISPR/Cas system-associated protein Csx1 |
Gene: TRQ2_1008: CRISPR/Cas system-associated protein Csx1 |
Gene: CTN_0701: CRISPR/Cas system-associated protein Csx1 |
Gene: Tpet_1098: CRISPR/Cas system-associated protein Csx1 |
Gene: Tnap_1014: CRISPR/Cas system-associated protein Csx1 |
|
|
|
|
|
|
CRISPR/Cas system-associated protein Csx1 |
| cas10 |
Gene: TM1811: CRISPR/Cas system-associated protein Cas10 |
Gene: TRQ2_1009: CRISPR/Cas system-associated protein Cas10 |
Gene: CTN_0702: CRISPR/Cas system-associated protein Cas10 |
Gene: Tpet_1097: CRISPR/Cas system-associated protein Cas10 |
Gene: Tnap_1015: CRISPR/Cas system-associated protein Cas10 |
|
|
|
|
|
|
CRISPR/Cas system-associated protein Cas10 |
| csm2 |
Gene: TM1810: CRISPR/Cas system-associated protein Csm2 |
Gene: TRQ2_1010: CRISPR/Cas system-associated protein Csm2 |
|
Gene: Tpet_1096: CRISPR/Cas system-associated protein Csm2 |
Gene: Tnap_1016: CRISPR/Cas system-associated protein Csm2 |
|
|
|
|
|
|
CRISPR/Cas system-associated protein Csm2 |
| csm3 |
Gene: TM1809: CRISPR/Cas system-associated RAMP superfamily protein Csm3 |
Gene: TRQ2_1011: CRISPR/Cas system-associated RAMP superfamily protein Csm3 |
|
Gene: Tpet_1095: CRISPR/Cas system-associated RAMP superfamily protein Csm3 |
Gene: Tnap_1017: CRISPR/Cas system-associated RAMP superfamily protein Csm3 |
|
|
|
|
|
|
CRISPR/Cas system-associated RAMP superfamily protein Csm3 |
| csm4 |
Gene: TM1808: CRISPR/Cas system-associated RAMP superfamily protein Csm4 |
Gene: TRQ2_1012: CRISPR/Cas system-associated RAMP superfamily protein Csm4 |
|
Gene: Tpet_1094: CRISPR/Cas system-associated RAMP superfamily protein Csm4 |
Gene: Tnap_1018: CRISPR/Cas system-associated RAMP superfamily protein Csm4 |
|
|
|
|
|
|
CRISPR/Cas system-associated RAMP superfamily protein Csm4 |
| csm5 |
Gene: TM1807: CRISPR/Cas system-associated RAMP superfamily protein Csm5 |
Gene: TRQ2_1013: CRISPR/Cas system-associated RAMP superfamily protein Csm5 |
|
Gene: Tpet_1093: CRISPR/Cas system-associated RAMP superfamily protein Csm5 |
Gene: Tnap_1019: CRISPR/Cas system-associated RAMP superfamily protein Csm5 |
|
|
|
|
|
|
CRISPR/Cas system-associated RAMP superfamily protein Csm5 |
| TM1806 |
Gene: TM1806: hypothetical protein |
Gene: TRQ2_1014: hypothetical protein |
|
Gene: Tpet_1092: hypothetical protein |
Gene: Tnap_1020: hypothetical protein |
|
|
|
|
|
|
hypothetical protein |
| CRON 4. | ||||||||||||
| TM0983 |
*
Thermotoga maritima MSB8 Site: position = -41 score = 5.13954 sequence = TTGAGATTTTTTTCACAA Gene: TM0983: conserved hypothetical protein, SirA family |
*
Thermotoga sp. RQ2 Site: position = -62 score = 4.67089 sequence = ATGTTATCATTTTCACAA Site: position = -41 score = 5.13954 sequence = TTGAGATTTTTTTCACAA Gene: TRQ2_1812: conserved hypothetical protein, SirA family |
*
Thermotoga neapolitana DSM 4359 Site: position = -32 score = 5.13954 sequence = TTGAGATTTTTTTCACAA Gene: CTN_1595: conserved hypothetical protein, SirA family |
*
Thermotoga petrophila RKU-1 Site: position = -41 score = 5.13954 sequence = TTGAGATTTTTTTCACAA Site: position = -62 score = 4.67089 sequence = ATGTTATCATTTTCACAA Gene: Tpet_1758: conserved hypothetical protein, SirA family |
*
Thermotoga naphthophila RKU-10 Site: position = -63 score = 4.67089 sequence = ATGTTATCATTTTCACAA Gene: Tnap_1770: conserved hypothetical protein, SirA family |
*
Thermotoga lettingae TMO Site: position = -34 score = 4.8774 sequence = TcGatAtttTTTTCACgA Gene: Tlet_1312: conserved hypothetical protein, SirA family |
|
|
|
|
|
conserved hypothetical protein, SirA family |
| TM0982 |
Gene: TM0982: protein of unknown function DUF395 YeeE/YedE |
|
Gene: CTN_1596: protein of unknown function DUF395 YeeE/YedE |
Gene: Tpet_1759: protein of unknown function DUF395 YeeE/YedE |
|
Gene: Tlet_1313: protein of unknown function DUF395 YeeE/YedE |
|
|
|
|
|
protein of unknown function DUF395 YeeE/YedE |
| TM0981 |
Gene: TM0981: DsrE family protein |
Gene: TRQ2_1814: DsrE family protein |
Gene: CTN_1597: DsrE family protein |
Gene: Tpet_1760: DsrE family protein |
Gene: Tnap_1772: DsrE family protein |
Gene: Tlet_1314: DsrE family protein |
|
|
|
|
|
DsrE family protein |
| TM0980 |
Gene: TM0980: uncharacterized protein involved in the oxidation of intracellular sulfur-like protein |
Gene: TRQ2_1815: uncharacterized protein involved in the oxidation of intracellular sulfur-like protein |
Gene: CTN_1598: uncharacterized protein involved in the oxidation of intracellular sulfur-like protein |
Gene: Tpet_1761: uncharacterized protein involved in the oxidation of intracellular sulfur-like protein |
Gene: Tnap_1773: uncharacterized protein involved in the oxidation of intracellular sulfur-like protein |
Gene: Tlet_1315: uncharacterized protein involved in the oxidation of intracellular sulfur-like protein |
|
|
|
|
|
uncharacterized protein involved in the oxidation of intracellular sulfur-like protein |
| TM0979 |
Gene: TM0979: DsrH family protein |
Gene: TRQ2_1816: DsrH family protein |
Gene: CTN_1599: DsrH family protein |
Gene: Tpet_1762: DsrH family protein |
Gene: Tnap_1774: DsrH family protein |
Gene: Tlet_1316: DsrH family protein |
|
|
|
|
|
DsrH family protein |
| CRON 5. | ||||||||||||
| Pmob_0727 |
|
|
|
|
|
|
|
|
|
*2
Petrotoga mobilis SJ95 Site: position = -133 score = 5.31639 sequence = ATGTGAATATTTTCACAA Gene: Pmob_0728: oxidoreductase domain protein Gene: Pmob_0727: oxidoreductase domain protein |
|
oxidoreductase domain protein |
| hycA |
*
Thermotoga maritima MSB8 Site: position = -27 score = 4.26228 sequence = aTGTGAAAAaaaTatCAg Site: position = -2 score = 5.03107 sequence = TTGTGAAAAaaTTCcCgA Gene: TM0012: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
*
Thermotoga sp. RQ2 Site: position = -44 score = 5.03107 sequence = TTGTGAAAAAATTCCCGA Site: position = -69 score = 4.26228 sequence = ATGTGAAAAAAATATCAG Gene: TRQ2_0933: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
*
Thermotoga neapolitana DSM 4359 Site: position = -61 score = 4.26228 sequence = ATGTGAAAAAAATATCAG Site: position = -36 score = 5.21271 sequence = TTGTGAAAAAATTCTCGA Gene: CTN_0686: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
*
Thermotoga petrophila RKU-1 Site: position = -69 score = 4.26228 sequence = ATGTGAAAAAAATATCAG Site: position = -44 score = 5.03107 sequence = TTGTGAAAAAATTCCCGA Gene: Tpet_0911: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
*
Thermotoga naphthophila RKU-10 Site: position = -44 score = 5.03107 sequence = TTGTGAAAAAATTCCCGA Site: position = -69 score = 4.26228 sequence = ATGTGAAAAAAATATCAG Gene: Tnap_0643: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
*
Thermotoga lettingae TMO Site: position = -30 score = 4.83756 sequence = TTGTGAATTTATTAACAG Gene: Tlet_1522: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
*
Thermosipho africanus TCF52B Site: position = 12 score = 4.20874 sequence = TTGTGAAAAacaTgtCgA Site: position = -65 score = 4.59739 sequence = aaGTGAAAtTTTTtACtt Gene: THA_1559: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
*
Thermosipho melanesiensis BI429 Site: position = 9 score = 4.20874 sequence = TTGTGAAAAacaTgtCgA Site: position = -68 score = 4.45741 sequence = aaGTGAAttTTTTtACtt Gene: Tmel_1172: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
*
Fervidobacterium nodosum Rt17-B1 Site: position = -38 score = 4.82917 sequence = ATGTTATAATAATCACGA Gene: Fnod_0995: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
*2
Petrotoga mobilis SJ95 Gene: Pmob_0726: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) Site: position = -36 score = 5.35947 sequence = TAGTGAAAATATTAACAA Gene: Pmob_1151: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
*
Thermotogales bacterium TBF 19.5.1 Site: position = -71 score = 4.64776 sequence = aaGTGAAAtaaaTaACAt Gene: Kole_0180: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) |
| hycB |
Gene: TM0011: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
Gene: TRQ2_0934: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
Gene: CTN_0687: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
Gene: Tpet_0912: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
Gene: Tnap_0642: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
Gene: Tlet_1521: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
Gene: THA_1558: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
Gene: Tmel_1171: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
Gene: Fnod_0994: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
Gene: Pmob_0725: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
Gene: Kole_0181: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2) |
| hycC |
Gene: TM0010: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
Gene: TRQ2_0935: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
Gene: CTN_0688: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
Gene: Tpet_0913: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
Gene: Tnap_0641: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
Gene: Tlet_1520: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
Gene: THA_1556: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
Gene: Tmel_1170: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
Gene: Fnod_0993: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
2
Petrotoga mobilis SJ95 Gene: Pmob_0724: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) Gene: Pmob_1150: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
Gene: Kole_0182: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2) |
| hycD |
*
Thermotoga maritima MSB8 Site: position = 24 score = 5.27953 sequence = TTGAGAAATTTATCACAA Gene: TM0201: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
*
Thermotoga sp. RQ2 Site: position = -54 score = 5.27953 sequence = TTGAGAAATTTATCACAA Gene: TRQ2_0747: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
*
Thermotoga neapolitana DSM 4359 Site: position = 0 score = 5.13954 sequence = TTGAGAATTTTATCACAA Gene: CTN_0485: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
*
Thermotoga petrophila RKU-1 Site: position = -54 score = 5.27953 sequence = TTGAGAAATTTATCACAA Gene: Tpet_0723: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
*
Thermotoga naphthophila RKU-10 Site: position = -54 score = 5.27953 sequence = TTGAGAAATTTATCACAA Gene: Tnap_0831: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
*
Thermotoga lettingae TMO Site: position = -42 score = 4.73353 sequence = ATGTGAATACTTTAACAA Gene: Tlet_1350: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
*
Thermosipho africanus TCF52B Site: position = -106 score = 4.69619 sequence = TTGTGAtAtaaTTtACtt Gene: THA_1808: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
*
Thermosipho melanesiensis BI429 Site: position = -108 score = 4.69619 sequence = TTGTGAtAtaaTTtACtt Gene: Tmel_1601: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
Gene: Fnod_0236: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
*2
Petrotoga mobilis SJ95 Gene: Pmob_0723: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) Site: position = -31 score = 4.85594 sequence = TTGAGAAATTTTACACAA Gene: Pmob_1149: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
*
Thermotogales bacterium TBF 19.5.1 Site: position = -57 score = 4.65462 sequence = TTGATAGAAAATTCACAA Gene: Kole_0172: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) |
| hycE |
|
*
Thermotoga sp. RQ2 Site: position = -30 score = 5.25055 sequence = TTGTGAAATTTTTGACGA Gene: TRQ2_0721: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2) |
*
Thermotoga neapolitana DSM 4359 Site: position = 8 score = 5.25055 sequence = TTGTGAAATTTTTGACGA Gene: CTN_0459: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2) |
*
Thermotoga petrophila RKU-1 Site: position = -30 score = 5.25055 sequence = TTGTGAAATTTTTGACGA Gene: Tpet_0697: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2) |
*
Thermotoga naphthophila RKU-10 Site: position = -30 score = 5.25055 sequence = TTGTGAAATTTTTGACGA Gene: Tnap_0857: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2) |
Gene: Tlet_1519: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2) |
Gene: THA_1555: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2) |
Gene: Tmel_1169: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2) |
Gene: Fnod_0992: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2) |
|
Gene: Kole_0183: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2) |
NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2) |
| hycF |
*
Thermotoga maritima MSB8 Site: position = -499 score = 5.25055 sequence = TTGTGAAATTTTTGACGA Gene: TM0228: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
Gene: TRQ2_0720: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
Gene: CTN_0458: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
Gene: Tpet_0696: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
Gene: Tnap_0858: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
Gene: Tlet_1518: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
Gene: THA_1554: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
Gene: Tmel_1168: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
Gene: Fnod_0991: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
|
Gene: Kole_0184: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2) |
| TM0009 |
Gene: TM0009: rubrerythrin |
Gene: TRQ2_0936: rubrerythrin |
Gene: CTN_0689: rubrerythrin |
Gene: Tpet_0914: rubrerythrin |
Gene: Tnap_0640: rubrerythrin |
|
|
|
|
|
|
rubrerythrin |
| CRON 6. | ||||||||||||
| dnaX |
*
Thermotoga maritima MSB8 Site: position = -104 score = 5.12168 sequence = TaGTtAtttTTTTCACgA Gene: TM0686: DNA polymerase III subunits gamma and tau |
*
Thermotoga sp. RQ2 Site: position = -104 score = 5.12168 sequence = TAGTTATTTTTTTCACGA Gene: TRQ2_0243: DNA polymerase III subunits gamma and tau |
*
Thermotoga neapolitana DSM 4359 Site: position = -103 score = 5.12168 sequence = TAGTTATTTTTTTCACGA Gene: CTN_1900: DNA polymerase III subunits gamma and tau |
*
Thermotoga petrophila RKU-1 Site: position = -104 score = 5.12168 sequence = TAGTTATTTTTTTCACGA Gene: Tpet_0245: DNA polymerase III subunits gamma and tau |
*
Thermotoga naphthophila RKU-10 Site: position = -104 score = 5.12168 sequence = TAGTTATTTTTTTCACGA Gene: Tnap_0482: DNA polymerase III subunits gamma and tau |
*
Thermotoga lettingae TMO Site: position = -29 score = 4.00202 sequence = cTGTtAtAATTTaatCAA Gene: Tlet_1000: DNA polymerase III subunits gamma and tau |
Gene: THA_1713: DNA polymerase III subunits gamma and tau |
Gene: Tmel_1397: DNA polymerase III subunits gamma and tau |
Gene: Fnod_0277: DNA polymerase III subunits gamma and tau |
Gene: Pmob_1414: DNA polymerase III subunits gamma and tau |
*
Thermotogales bacterium TBF 19.5.1 Site: position = -90 score = 5.35235 sequence = TaGTtAAtAaTTTCACAA Gene: Kole_2018: DNA polymerase III subunits gamma and tau |
DNA polymerase III subunits gamma and tau |
| TM0687 |
Gene: TM0687: conserved probable DNA binding protein, similar to YbaB family |
|
Gene: CTN_1899: conserved probable DNA binding protein, similar to YbaB family |
Gene: Tpet_0244: conserved probable DNA binding protein, similar to YbaB family |
Gene: Tnap_0483: conserved probable DNA binding protein, similar to YbaB family |
Gene: Tlet_0999: conserved probable DNA binding protein, similar to YbaB family |
|
|
|
|
Gene: Kole_2019: conserved probable DNA binding protein, similar to YbaB family |
conserved probable DNA binding protein, similar to YbaB family |
| gap |
Gene: TM0688: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: TRQ2_0241: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: CTN_1898: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: Tpet_0243: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: Tnap_0484: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: Tlet_0998: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
*
Thermosipho africanus TCF52B Site: position = -44 score = 5.18923 sequence = TaGTaAAAtTTTTCACgA Gene: THA_1607: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
*
Thermosipho melanesiensis BI429 Site: position = -45 score = 5.18923 sequence = TaGTaAAAtTTTTCACgA Gene: Tmel_1266: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
*
Fervidobacterium nodosum Rt17-B1 Site: position = -77 score = 4.73878 sequence = TTGTacAAtTTTTCACgA Gene: Fnod_0740: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
*
Petrotoga mobilis SJ95 Site: position = -43 score = 4.63709 sequence = aaGaGAAAAaaaTaACAA Gene: Pmob_1445: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: Kole_2020: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
| pgk |
Gene: TM0689: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: TRQ2_0240: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: CTN_1897: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: Tpet_0242: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: Tnap_0485: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: Tlet_0997: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: THA_1606: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: Tmel_1265: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: Fnod_0739: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: Pmob_1444: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: Kole_2021: Phosphoglycerate kinase (EC 2.7.2.3) |
Phosphoglycerate kinase (EC 2.7.2.3) |
| tpi |
|
Gene: TRQ2_0239: Triosephosphate isomerase (EC 5.3.1.1) |
Gene: CTN_1896: Triosephosphate isomerase (EC 5.3.1.1) |
Gene: Tpet_0241: Triosephosphate isomerase (EC 5.3.1.1) |
Gene: Tnap_0486: Triosephosphate isomerase (EC 5.3.1.1) |
Gene: Tlet_0996: Triosephosphate isomerase (EC 5.3.1.1) |
Gene: THA_1605: Triosephosphate isomerase (EC 5.3.1.1) |
Gene: Tmel_1264: Triosephosphate isomerase (EC 5.3.1.1) |
Gene: Fnod_0738: Triosephosphate isomerase (EC 5.3.1.1) |
|
Gene: Kole_2022: Triosephosphate isomerase (EC 5.3.1.1) |
Triosephosphate isomerase (EC 5.3.1.1) |
| CRON 7. | ||||||||||||
| sat |
*
Thermotoga maritima MSB8 Site: position = -47 score = 5.09579 sequence = TAGTTAAAAAAATAACAA Gene: TM1400: Serine aminotransferase (EC 2.6.5.1) |
*
Thermotoga sp. RQ2 Site: position = -47 score = 5.09579 sequence = TAGTTAAAAAAATAACAA Gene: TRQ2_1429: Serine aminotransferase (EC 2.6.5.1) |
*
Thermotoga neapolitana DSM 4359 Site: position = -47 score = 5.09579 sequence = TAGTTAAAAAAATAACAA Gene: CTN_1191: Serine aminotransferase (EC 2.6.5.1) |
*
Thermotoga petrophila RKU-1 Site: position = -47 score = 5.09579 sequence = TAGTTAAAAAAATAACAA Gene: Tpet_1383: Serine aminotransferase (EC 2.6.5.1) |
*
Thermotoga naphthophila RKU-10 Site: position = -47 score = 5.09579 sequence = TAGTTAAAAAAATAACAA Gene: Tnap_1403: Serine aminotransferase (EC 2.6.5.1) |
Gene: Tlet_1767: Serine aminotransferase (EC 2.6.5.1) |
Gene: THA_344: Serine aminotransferase (EC 2.6.5.1) |
Gene: Tmel_0111: Serine aminotransferase (EC 2.6.5.1) |
Gene: Fnod_0104: Serine aminotransferase (EC 2.6.5.1) |
Gene: Pmob_0257: Serine aminotransferase (EC 2.6.5.1) |
Gene: Kole_2168: Serine aminotransferase (EC 2.6.5.1) |
Serine aminotransferase (EC 2.6.5.1) |
| hpr |
Gene: TM1401: Hydroxypyruvate reductase (EC 1.1.1.81) |
Gene: TRQ2_1428: Hydroxypyruvate reductase (EC 1.1.1.81) |
Gene: CTN_1190: Hydroxypyruvate reductase (EC 1.1.1.81) |
Gene: Tpet_1382: Hydroxypyruvate reductase (EC 1.1.1.81) |
Gene: Tnap_1402: Hydroxypyruvate reductase (EC 1.1.1.81) |
Gene: Tlet_1768: Hydroxypyruvate reductase (EC 1.1.1.81) |
Gene: THA_345: Hydroxypyruvate reductase (EC 1.1.1.81) |
Gene: Tmel_0112: Hydroxypyruvate reductase (EC 1.1.1.81) |
Gene: Fnod_0103: Hydroxypyruvate reductase (EC 1.1.1.81) |
Gene: Pmob_0258: Hydroxypyruvate reductase (EC 1.1.1.81) |
Gene: Kole_2169: Hydroxypyruvate reductase (EC 1.1.1.81) |
Hydroxypyruvate reductase (EC 1.1.1.81) |
| CRON 8. | ||||||||||||
| adhA |
|
*
Thermotoga sp. RQ2 Site: position = -85 score = 5.04932 sequence = GTGAGAAAATTTTCACAA Site: position = -61 score = 4.72615 sequence = TTGTTATGAAATTCACAA Gene: TRQ2_0578: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent |
|
*
Thermotoga petrophila RKU-1 Site: position = -193 score = 4.72615 sequence = TTGTTATGAAATTCACAA Site: position = -217 score = 5.04932 sequence = GTGAGAAAATTTTCACAA Gene: Tpet_0563: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent |
*
Thermotoga naphthophila RKU-10 Site: position = -100 score = 5.04932 sequence = GTGAGAAAATTTTCACAA Site: position = -76 score = 4.72615 sequence = TTGTTATGAAATTCACAA Gene: Tnap_0992: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent |
|
*
Thermosipho africanus TCF52B Site: position = -95 score = 5.31989 sequence = TcGTGAAAAaaTTaACgA Site: position = -29 score = 5.08931 sequence = TTGTGAAAATATTCACAG Gene: THA_374: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent |
*
Thermosipho melanesiensis BI429 Site: position = -95 score = 4.66813 sequence = ccGTGAAAAaaaTaACgA Site: position = -29 score = 5.08931 sequence = TTGTGAAAATATTCACAG Gene: Tmel_0139: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent |
*
Fervidobacterium nodosum Rt17-B1 Site: position = -78 score = 5.03231 sequence = AAGTGATTTTTTTCACAA Gene: Fnod_1174: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent |
Gene: Pmob_1193: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent |
*
Thermotogales bacterium TBF 19.5.1 Site: position = -111 score = 4.80942 sequence = cTGTGAAAAaaTTCACAt Site: position = -33 score = 5.18422 sequence = AAGTGAAAAAATTCACAA Gene: Kole_0742: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent |
Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent |
| CRON 9. | ||||||||||||
| gldA |
*
Thermotoga maritima MSB8 Site: position = -52 score = 5.53862 sequence = TCGTGAAAAATTTAACAA Gene: TM0423: Glycerol dehydrogenase (EC 1.1.1.6) |
*
Thermotoga sp. RQ2 Site: position = -52 score = 5.53862 sequence = TCGTGAAAAATTTAACAA Gene: TRQ2_0522: Glycerol dehydrogenase (EC 1.1.1.6) |
*
Thermotoga neapolitana DSM 4359 Site: position = -30 score = 4.13555 sequence = TTGTGAAATACGTAACAT Gene: CTN_0247: Glycerol dehydrogenase (EC 1.1.1.6) |
*
Thermotoga petrophila RKU-1 Site: position = -52 score = 5.53862 sequence = TCGTGAAAAATTTAACAA Gene: Tpet_0498: Glycerol dehydrogenase (EC 1.1.1.6) |
|
|
|
|
|
|
Gene: Kole_0505: Glycerol dehydrogenase (EC 1.1.1.6) |
Glycerol dehydrogenase (EC 1.1.1.6) |
| CRON 10. | ||||||||||||
| TM1420 |
*
Thermotoga maritima MSB8 Site: position = -45 score = 4.98889 sequence = TaGTGAAAAaTaTaACgt Gene: TM1420: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein |
*
Thermotoga sp. RQ2 Site: position = -51 score = 4.98889 sequence = TaGTGAAAAaTaTaACgt Gene: TRQ2_1314: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein |
*
Thermotoga neapolitana DSM 4359 Site: position = -51 score = 4.98889 sequence = TaGTGAAAAaTaTaACgt Gene: CTN_1072: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein |
*
Thermotoga petrophila RKU-1 Site: position = -69 score = 4.98889 sequence = TaGTGAAAAaTaTaACgt Gene: Tpet_1372: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein |
*
Thermotoga naphthophila RKU-10 Site: position = -51 score = 4.98889 sequence = TaGTGAAAAaTaTaACgt Gene: Tnap_1390: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein |
*
Thermotoga lettingae TMO Site: position = 32 score = 5.16085 sequence = TcGTGAAAtaaaTaACgA Site: position = 46 score = 4.74461 sequence = acGatAAAAaTaTCACgA Gene: Tlet_0957: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein |
*
Thermosipho africanus TCF52B Site: position = -35 score = 5.03518 sequence = acGTtAtAtTTTTCACgA Site: position = -49 score = 4.90233 sequence = TcGTGAAAATaaTaACgt Gene: THA_782: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein |
*
Thermosipho melanesiensis BI429 Site: position = -43 score = 5.03518 sequence = TcGTGAAAAaTaTaACgt Site: position = -29 score = 4.88807 sequence = acGTtAtttaTTTCACgA Gene: Tmel_0495: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein |
*
Fervidobacterium nodosum Rt17-B1 Site: position = -52 score = 5.31276 sequence = TcGTGAAAtaaTTaACgA Gene: Fnod_0319: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein |
|
|
Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein |
| TM1421 |
2
Thermotoga maritima MSB8 Gene: TM1422: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein Gene: TM1421: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein |
Gene: TRQ2_1315: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein |
Gene: CTN_1071: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein |
Gene: Tpet_1371: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein |
Gene: Tnap_1389: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein |
Gene: Tlet_0956: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein |
Gene: THA_783: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein |
Gene: Tmel_0494: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein |
Gene: Fnod_0318: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein |
|
|
Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein |
| TM1423 |
Gene: TM1423: predicted protein serine/threonine phosphatase |
Gene: TRQ2_1316: predicted protein serine/threonine phosphatase |
Gene: CTN_1070: predicted protein serine/threonine phosphatase |
Gene: Tpet_1370: predicted protein serine/threonine phosphatase |
|
Gene: Tlet_0955: predicted protein serine/threonine phosphatase |
Gene: THA_784: predicted protein serine/threonine phosphatase |
Gene: Tmel_0493: predicted protein serine/threonine phosphatase |
Gene: Fnod_0317: predicted protein serine/threonine phosphatase |
|
|
predicted protein serine/threonine phosphatase |
| hydC |
Gene: TM1424: Fe-hydrogenase, gamma subunit, FeS cluster containing |
Gene: TRQ2_1317: Fe-hydrogenase, gamma subunit, FeS cluster containing |
Gene: CTN_1069: Fe-hydrogenase, gamma subunit, FeS cluster containing |
Gene: Tpet_1369: Fe-hydrogenase, gamma subunit, FeS cluster containing |
Gene: Tnap_1387: Fe-hydrogenase, gamma subunit, FeS cluster containing |
Gene: Tlet_0954: Fe-hydrogenase, gamma subunit, FeS cluster containing |
Gene: THA_785: Fe-hydrogenase, gamma subunit, FeS cluster containing |
Gene: Tmel_0492: Fe-hydrogenase, gamma subunit, FeS cluster containing |
*
Fervidobacterium nodosum Rt17-B1 Site: position = -125 score = 4.97395 sequence = TTGTGAAAAaaaTaACgt Site: position = -111 score = 4.7174 sequence = acGTtAtAAaaaTaACAA Gene: Fnod_0227: Fe-hydrogenase, gamma subunit, FeS cluster containing |
|
|
Fe-hydrogenase, gamma subunit, FeS cluster containing |
| hydB |
Gene: TM1425: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity |
Gene: TRQ2_1318: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity |
Gene: CTN_1068: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity |
Gene: Tpet_1368: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity |
Gene: Tnap_1386: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity |
Gene: Tlet_0953: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity |
Gene: THA_786: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity |
Gene: Tmel_0491: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity |
Gene: Fnod_0226: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity |
|
|
Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity |
| hydA |
Gene: TM1426: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity |
Gene: TRQ2_1319: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity |
Gene: CTN_1067: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity |
Gene: Tpet_1367: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity |
Gene: Tnap_1385: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity |
Gene: Tlet_0952: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity |
Gene: THA_787: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity |
Gene: Tmel_0490: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity |
Gene: Fnod_0225: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity |
|
|
Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity |
| rex1 |
Gene: TM1427: Redox sensitive transcriptional regulator paralog, Rex family |
Gene: TRQ2_1320: Redox sensitive transcriptional regulator paralog, Rex family |
Gene: CTN_1066: Redox sensitive transcriptional regulator paralog, Rex family |
Gene: Tpet_1366: Redox sensitive transcriptional regulator paralog, Rex family |
Gene: Tnap_1384: Redox sensitive transcriptional regulator paralog, Rex family |
Gene: Tlet_0951: Redox sensitive transcriptional regulator paralog, Rex family |
Gene: THA_788: Redox sensitive transcriptional regulator paralog, Rex family |
Gene: Tmel_0489: Redox sensitive transcriptional regulator paralog, Rex family |
Gene: Fnod_0224: Redox sensitive transcriptional regulator paralog, Rex family |
|
|
Redox sensitive transcriptional regulator paralog, Rex family |
| CRON 11. | ||||||||||||
| noxE2 |
|
|
|
|
|
|
*
Thermosipho africanus TCF52B Site: position = -38 score = 4.789 sequence = AAGTTAAATTATTCTCAA Gene: THA_982: NADH oxidase (EC 1.6.99.3) |
*
Thermosipho melanesiensis BI429 Site: position = -31 score = 5.20043 sequence = TAGTTAAAAAAATCACAA Gene: Tmel_0141: NADH oxidase (EC 1.6.99.3) |
*
Fervidobacterium nodosum Rt17-B1 Site: position = -65 score = 4.52985 sequence = aaGTGAAAAaaaTaACtt Gene: Fnod_0587: NADH oxidase (EC 1.6.99.3) |
|
|
NADH oxidase (EC 1.6.99.3) |
| noxE |
*
Thermotoga maritima MSB8 Site: position = -32 score = 4.95487 sequence = TCGTGAAAAATTTCTCTT Gene: TM0379: NADH oxidase (EC 1.6.99.3) |
*
Thermotoga sp. RQ2 Site: position = -32 score = 4.95487 sequence = TCGTGAAAAATTTCTCTT Gene: TRQ2_0544: NADH oxidase (EC 1.6.99.3) |
*
Thermotoga neapolitana DSM 4359 Site: position = -34 score = 4.55541 sequence = TTGTGAAATCTTTCTCTT Gene: CTN_0317: NADH oxidase (EC 1.6.99.3) |
*
Thermotoga petrophila RKU-1 Site: position = -32 score = 4.81489 sequence = TCGTGAAAAAATTCTCTT Gene: Tpet_0530: NADH oxidase (EC 1.6.99.3) |
*
Thermotoga naphthophila RKU-10 Site: position = -32 score = 4.81489 sequence = TCGTGAAAAAATTCTCTT Gene: Tnap_0182: NADH oxidase (EC 1.6.99.3) |
|
|
*
Thermosipho melanesiensis BI429 Site: position = -59 score = 4.90211 sequence = TTGTGAAAAATATATCAT Gene: Tmel_1229: NADH oxidase (EC 1.6.99.3) |
|
|
Gene: Kole_1123: NADH oxidase (EC 1.6.99.3) |
NADH oxidase (EC 1.6.99.3) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |