Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Thermotoga lettingae TMO

Properties
Regulator type: Transcription factor
TF locus tag: Tlet_0332
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Thermotogales
Statistics of regulated genes:
- Genes 23
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 114 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -34
Score: 4.9
Sequence: TcGatAtttTTTTCACgA
Locus tag: Tlet_1312
Name: TM0983
Funciton: conserved hypothetical protein, SirA family
Locus tag: Tlet_1313
Name: TM0982
Funciton: protein of unknown function DUF395 YeeE/YedE
Locus tag: Tlet_1314
Name: TM0981
Funciton: DsrE family protein
Locus tag: Tlet_1315
Name: TM0980
Funciton: uncharacterized protein involved in the oxidation of intracellular sulfur-like protein
Locus tag: Tlet_1316
Name: TM0979
Funciton: DsrH family protein
Tlet_1312
TM0983
conserved hypothetical protein, SirA family
Tlet_1313
TM0982
protein of unknown function DUF395 YeeE/YedE
Tlet_1314
TM0981
DsrE family protein
Tlet_1315
TM0980
uncharacterized protein involved in the oxidation of intracellular sulfur-like protein
Tlet_1316
TM0979
DsrH family protein
Position: 32
Score: 5.2
Sequence: TcGTGAAAtaaaTaACgA
Position: 46
Score: 4.7
Sequence: acGatAAAAaTaTCACgA
Locus tag: Tlet_0957
Name: TM1420
Funciton: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
Locus tag: Tlet_0956
Name: TM1421
Funciton: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
Locus tag: Tlet_0955
Name: TM1423
Funciton: predicted protein serine/threonine phosphatase
Locus tag: Tlet_0954
Name: hydC
Funciton: Fe-hydrogenase, gamma subunit, FeS cluster containing
Locus tag: Tlet_0953
Name: hydB
Funciton: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
Locus tag: Tlet_0952
Name: hydA
Funciton: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
Locus tag: Tlet_0951
Name: rex1
Funciton: Redox sensitive transcriptional regulator paralog, Rex family
Tlet_0957
TM1420
Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
Tlet_0956
TM1421
Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
Tlet_0955
TM1423
predicted protein serine/threonine phosphatase
Tlet_0954
hydC
Fe-hydrogenase, gamma subunit, FeS cluster containing
Tlet_0953
hydB
Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
Tlet_0952
hydA
Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
Tlet_0951
rex1
Redox sensitive transcriptional regulator paralog, Rex family
Position: -42
Score: 4.7
Sequence: ATGTGAATACTTTAACAA
Locus tag: Tlet_1350
Name: hycD
Funciton: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2)
Tlet_1350
hycD
NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2)
Position: -29
Score: 4
Sequence: cTGTtAtAATTTaatCAA
Locus tag: Tlet_1000
Name: dnaX
Funciton: DNA polymerase III subunits gamma and tau
Locus tag: Tlet_0999
Name: TM0687
Funciton: conserved probable DNA binding protein, similar to YbaB family
Locus tag: Tlet_0998
Name: gap
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: Tlet_0997
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: Tlet_0996
Name: tpi
Funciton: Triosephosphate isomerase (EC 5.3.1.1)
Tlet_1000
dnaX
DNA polymerase III subunits gamma and tau
Tlet_0999
TM0687
conserved probable DNA binding protein, similar to YbaB family
Tlet_0998
gap
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Tlet_0997
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
Tlet_0996
tpi
Triosephosphate isomerase (EC 5.3.1.1)
Position: -30
Score: 4.8
Sequence: TTGTGAATTTATTAACAG
Locus tag: Tlet_1522
Name: hycA
Funciton: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2)
Locus tag: Tlet_1521
Name: hycB
Funciton: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2)
Locus tag: Tlet_1520
Name: hycC
Funciton: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2)
Locus tag: Tlet_1519
Name: hycE
Funciton: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2)
Locus tag: Tlet_1518
Name: hycF
Funciton: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2)
Tlet_1522
hycA
NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2)
Tlet_1521
hycB
NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2)
Tlet_1520
hycC
NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2)
Tlet_1519
hycE
NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2)
Tlet_1518
hycF
NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise