Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Fervidobacterium nodosum Rt17-B1

Properties
Regulator type: Transcription factor
TF locus tag: Fnod_0423
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Thermotogales
Statistics of regulated genes:
- Genes 18
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 114 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -52
Score: 5.3
Sequence: TcGTGAAAtaaTTaACgA
Locus tag: Fnod_0319
Name: TM1420
Funciton: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
Locus tag: Fnod_0318
Name: TM1421
Funciton: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
Locus tag: Fnod_0317
Name: TM1423
Funciton: predicted protein serine/threonine phosphatase
Fnod_0319
TM1420
Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
Fnod_0318
TM1421
Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
Fnod_0317
TM1423
predicted protein serine/threonine phosphatase
Position: -125
Score: 5
Sequence: TTGTGAAAAaaaTaACgt
Position: -111
Score: 4.7
Sequence: acGTtAtAAaaaTaACAA
Locus tag: Fnod_0227
Name: hydC
Funciton: Fe-hydrogenase, gamma subunit, FeS cluster containing
Locus tag: Fnod_0226
Name: hydB
Funciton: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
Locus tag: Fnod_0225
Name: hydA
Funciton: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
Locus tag: Fnod_0224
Name: rex1
Funciton: Redox sensitive transcriptional regulator paralog, Rex family
Fnod_0227
hydC
Fe-hydrogenase, gamma subunit, FeS cluster containing
Fnod_0226
hydB
Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
Fnod_0225
hydA
Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
Fnod_0224
rex1
Redox sensitive transcriptional regulator paralog, Rex family
Position: -65
Score: 4.5
Sequence: aaGTGAAAAaaaTaACtt
Locus tag: Fnod_0587
Name: noxE2
Funciton: NADH oxidase (EC 1.6.99.3)
Fnod_0587
noxE2
NADH oxidase (EC 1.6.99.3)
Position: -78
Score: 5
Sequence: AAGTGATTTTTTTCACAA
Locus tag: Fnod_1174
Name: adhA
Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent
Fnod_1174
adhA
Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent
Position: -77
Score: 4.7
Sequence: TTGTacAAtTTTTCACgA
Locus tag: Fnod_0740
Name: gap
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: Fnod_0739
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: Fnod_0738
Name: tpi
Funciton: Triosephosphate isomerase (EC 5.3.1.1)
Fnod_0740
gap
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Fnod_0739
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
Fnod_0738
tpi
Triosephosphate isomerase (EC 5.3.1.1)
Position: -86
Score: 4.6
Sequence: TAGTGAAAAACTTGACAA
Locus tag: Fnod_0241
Name: TM0179
Funciton: hypothetical protein
Fnod_0241
TM0179
hypothetical protein
Position: -38
Score: 4.8
Sequence: ATGTTATAATAATCACGA
Locus tag: Fnod_0995
Name: hycA
Funciton: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2)
Locus tag: Fnod_0994
Name: hycB
Funciton: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2)
Locus tag: Fnod_0993
Name: hycC
Funciton: NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2)
Locus tag: Fnod_0992
Name: hycE
Funciton: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2)
Locus tag: Fnod_0991
Name: hycF
Funciton: NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2)
Fnod_0995
hycA
NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2)
Fnod_0994
hycB
NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2)
Fnod_0993
hycC
NAD-reducing Fe-hydrogenase, subunit HycC (EC 1.12.7.2)
Fnod_0992
hycE
NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2)
Fnod_0991
hycF
NAD-reducing Fe-hydrogenase, subunit HycF (EC 1.12.7.2)
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