Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cas6 gene

Properties
Regulog: Rex - Thermotogales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Thermotogae
Built upon 114 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Thermotoga maritima MSB8
Position: -40
Score: 4.90924
Sequence: ATGATAAAATTATCACAA
Locus tag: TM1814
Name: cas6
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Cas6
Locus tag: TM1813
Name: null
Funciton: hypothetical protein
Locus tag: TM1812
Name: csx1
Funciton: CRISPR/Cas system-associated protein Csx1
Locus tag: TM1811
Name: cas10
Funciton: CRISPR/Cas system-associated protein Cas10
Locus tag: TM1810
Name: csm2
Funciton: CRISPR/Cas system-associated protein Csm2
Locus tag: TM1809
Name: csm3
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm3
Locus tag: TM1808
Name: csm4
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm4
Locus tag: TM1807
Name: csm5
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm5
Locus tag: TM1806
Name: TM1806
Funciton: hypothetical protein
cas6-TM1813-csx1-cas10-csm2-csm3-csm4-csm5-TM1806 -40 4.9 ATGATAAAATTATCACAA TM1814
Thermotoga naphthophila RKU-10
Position: -40
Score: 4.90924
Sequence: ATGATAAAATTATCACAA
Locus tag: Tnap_1013
Name: cas6
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Cas6
Locus tag: Tnap_1014
Name: csx1
Funciton: CRISPR/Cas system-associated protein Csx1
Locus tag: Tnap_1015
Name: cas10
Funciton: CRISPR/Cas system-associated protein Cas10
Locus tag: Tnap_1016
Name: csm2
Funciton: CRISPR/Cas system-associated protein Csm2
Locus tag: Tnap_1017
Name: csm3
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm3
Locus tag: Tnap_1018
Name: csm4
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm4
Locus tag: Tnap_1019
Name: csm5
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm5
Locus tag: Tnap_1020
Name: TM1806
Funciton: hypothetical protein
cas6-csx1-cas10-csm2-csm3-csm4-csm5-TM1806 -40 4.9 ATGATAAAATTATCACAA Tnap_1013
Thermotoga neapolitana DSM 4359
Position: 117
Score: 4.90924
Sequence: aTGatAAAATTaTCACAA
Locus tag: CTN_0700
Name: cas6
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Cas6
Locus tag: CTN_0701
Name: csx1
Funciton: CRISPR/Cas system-associated protein Csx1
Locus tag: CTN_0702
Name: cas10
Funciton: CRISPR/Cas system-associated protein Cas10
cas6-csx1-cas10 117 4.9 aTGatAAAATTaTCACAA CTN_0700
Thermotoga petrophila RKU-1
Position: -40
Score: 4.90924
Sequence: ATGATAAAATTATCACAA
Locus tag: Tpet_1099
Name: cas6
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Cas6
Locus tag: Tpet_1098
Name: csx1
Funciton: CRISPR/Cas system-associated protein Csx1
Locus tag: Tpet_1097
Name: cas10
Funciton: CRISPR/Cas system-associated protein Cas10
Locus tag: Tpet_1096
Name: csm2
Funciton: CRISPR/Cas system-associated protein Csm2
Locus tag: Tpet_1095
Name: csm3
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm3
Locus tag: Tpet_1094
Name: csm4
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm4
Locus tag: Tpet_1093
Name: csm5
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm5
Locus tag: Tpet_1092
Name: TM1806
Funciton: hypothetical protein
cas6-csx1-cas10-csm2-csm3-csm4-csm5-TM1806 -40 4.9 ATGATAAAATTATCACAA Tpet_1099
Thermotoga sp. RQ2
Position: -40
Score: 4.90924
Sequence: ATGATAAAATTATCACAA
Locus tag: TRQ2_1007
Name: cas6
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Cas6
Locus tag: TRQ2_1008
Name: csx1
Funciton: CRISPR/Cas system-associated protein Csx1
Locus tag: TRQ2_1009
Name: cas10
Funciton: CRISPR/Cas system-associated protein Cas10
Locus tag: TRQ2_1010
Name: csm2
Funciton: CRISPR/Cas system-associated protein Csm2
Locus tag: TRQ2_1011
Name: csm3
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm3
Locus tag: TRQ2_1012
Name: csm4
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm4
Locus tag: TRQ2_1013
Name: csm5
Funciton: CRISPR/Cas system-associated RAMP superfamily protein Csm5
Locus tag: TRQ2_1014
Name: TM1806
Funciton: hypothetical protein
cas6-csx1-cas10-csm2-csm3-csm4-csm5-TM1806 -40 4.9 ATGATAAAATTATCACAA TRQ2_1007