Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Thermosipho africanus TCF52B

Properties
Regulator type: Transcription factor
TF locus tag: THA_1697
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Thermotogales
Statistics of regulated genes:
- Genes 16
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 114 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -49
Score: 4.9
Sequence: TcGTGAAAATaaTaACgt
Position: -35
Score: 5
Sequence: acGTtAtAtTTTTCACgA
Locus tag: THA_782
Name: TM1420
Funciton: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
Locus tag: THA_783
Name: TM1421
Funciton: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
Locus tag: THA_784
Name: TM1423
Funciton: predicted protein serine/threonine phosphatase
Locus tag: THA_785
Name: hydC
Funciton: Fe-hydrogenase, gamma subunit, FeS cluster containing
Locus tag: THA_786
Name: hydB
Funciton: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
Locus tag: THA_787
Name: hydA
Funciton: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
Locus tag: THA_788
Name: rex1
Funciton: Redox sensitive transcriptional regulator paralog, Rex family
THA_782
TM1420
Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
THA_783
TM1421
Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
THA_784
TM1423
predicted protein serine/threonine phosphatase
THA_785
hydC
Fe-hydrogenase, gamma subunit, FeS cluster containing
THA_786
hydB
Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
THA_787
hydA
Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
THA_788
rex1
Redox sensitive transcriptional regulator paralog, Rex family
Position: -38
Score: 4.8
Sequence: AAGTTAAATTATTCTCAA
Locus tag: THA_982
Name: noxE2
Funciton: NADH oxidase (EC 1.6.99.3)
THA_982
noxE2
NADH oxidase (EC 1.6.99.3)
Position: -106
Score: 4.7
Sequence: TTGTGAtAtaaTTtACtt
Locus tag: THA_1808
Name: hycD
Funciton: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2)
THA_1808
hycD
NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2)
Position: -95
Score: 5.3
Sequence: TcGTGAAAAaaTTaACgA
Position: -29
Score: 5.1
Sequence: TTGTGAAAATATTCACAG
Locus tag: THA_374
Name: adhA
Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent
THA_374
adhA
Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent
Position: -35
Score: 4.9
Sequence: TTGTGAATTTTTGCACTA
Locus tag: THA_713
Name: TM0179
Funciton: hypothetical protein
THA_713
TM0179
hypothetical protein
Position: -44
Score: 5.2
Sequence: TaGTaAAAtTTTTCACgA
Locus tag: THA_1607
Name: gap
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: THA_1606
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: THA_1605
Name: tpi
Funciton: Triosephosphate isomerase (EC 5.3.1.1)
THA_1607
gap
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
THA_1606
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
THA_1605
tpi
Triosephosphate isomerase (EC 5.3.1.1)
Position: -65
Score: 4.6
Sequence: aaGTGAAAtTTTTtACtt
Position: 12
Score: 4.2
Sequence: TTGTGAAAAacaTgtCgA
Locus tag: THA_1559
Name: hycA
Funciton: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2)
Locus tag: THA_1558
Name: hycB
Funciton: NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2)
THA_1559
hycA
NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2)
THA_1558
hycB
NAD-reducing Fe-hydrogenase, subunit HycB (EC 1.12.7.2)
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