Statistics of regulated genes

Genome	Genes	Operons
Agrobacterium tumefaciens str. C58 (Cereon)
Azorhizobium caulinodans ORS 571	34	12
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110	26	13
Bradyrhizobium sp. BTAi1	45	15
Brucella melitensis 16M
Mesorhizobium loti MAFF303099	29	10
Mesorhizobium sp. BNC1
Nitrobacter winogradskyi Nb-255	1	1
Rhizobium etli CFN 42	19	8
Rhizobium leguminosarum bv. viciae 3841	11	2
Rhizobium sp. NGR234	28	10
Rhodopseudomonas palustris CGA009	38	9
Sinorhizobium meliloti 1021	13	4
Xanthobacter autotrophicus Py2	36	11

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes																Function
CRON 1.
mlr5875	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -154 score = 4.00585 sequence = TGTCATGTCCGGGACA Gene: mlr5875: Hypothetical protein	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Hypothetical protein
cpxA	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mlr5876: Cytochrome P450 monooxygenase protein	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -193 score = 4.84308 sequence = TGTTAGATACGCGACA Gene: RHE_PD00215: Cytochrome P450 monooxygenase protein	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_a01170: Cytochrome P450 monooxygenase protein	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Cytochrome P450 monooxygenase protein
CRON 2.
modA	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu2561: Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1)	Azorhizobium caulinodans ORS 571 Gene: AZC_2368: Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1)	Bartonella quintana str. Toulouse	*2 Bradyrhizobium japonicum USDA 110 Site: position = -215 score = 4.45982 sequence = TGTCAGCTTGCCGACC Site: position = -195 score = 5.61936 sequence = TGTCGGAAATCCGACA Gene: blr6951: Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1) Gene: blr8160: Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1)	* Bradyrhizobium sp. BTAi1 Site: position = -224 score = 4.14568 sequence = CGTTGTGTTTGCGACA Site: position = -193 score = 4.08258 sequence = TGTCGAAAGTCGAACA Gene: BBta_2080: Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1)	Brucella melitensis 16M Gene: BMEII0005: Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1)	Mesorhizobium loti MAFF303099 Gene: mll1465: Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1)	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255 Gene: Nwi_0340: Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1)	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA4717: Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1)	Sinorhizobium meliloti 1021 Gene: SMc03196: Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1)	Xanthobacter autotrophicus Py2	Molybdenum ABC transporter, substrate-binding protein ModA (TC 3.A.1.8.1)
modB	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu2562: Molybdate ABC transporter, permease protein	Azorhizobium caulinodans ORS 571 Gene: AZC_2369: Molybdate ABC transporter, permease protein	Bartonella quintana str. Toulouse	*3 Bradyrhizobium japonicum USDA 110 Site: position = -369 score = 4.01356 sequence = TGTCCGCTTGGAAACA Site: position = -349 score = 4.2366 sequence = TGCCAGAAACCTGACA Gene: blr1719: Molybdate ABC transporter, permease protein Gene: blr6952: Molybdate ABC transporter, permease protein Gene: blr8161: Molybdate ABC transporter, permease protein	Bradyrhizobium sp. BTAi1 Gene: BBta_2079: Molybdate ABC transporter, permease protein	Brucella melitensis 16M Gene: BMEII0004: Molybdate ABC transporter, permease protein	Mesorhizobium loti MAFF303099 Gene: mll1464: Molybdate ABC transporter, permease protein	Mesorhizobium sp. BNC1 Gene: Meso_2721: Molybdate ABC transporter, permease protein	Nitrobacter winogradskyi Nb-255 Gene: Nwi_0339: Molybdate ABC transporter, permease protein	Rhizobium etli CFN 42 Gene: RHE_CH04072: Molybdate ABC transporter, permease protein	Rhizobium leguminosarum bv. viciae 3841 Gene: RL4686: Molybdate ABC transporter, permease protein	* Rhizobium sp. NGR234 Site: position = -55 score = 4.00662 sequence = CGTCGTGCATCCAACA Gene: NGR_c29850: Molybdate ABC transporter, permease protein	Rhodopseudomonas palustris CGA009 Gene: RPA4716: Molybdate ABC transporter, permease protein	Sinorhizobium meliloti 1021 Gene: SMc03197: Molybdate ABC transporter, permease protein	Xanthobacter autotrophicus Py2	Molybdate ABC transporter, permease protein
modC	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu2563: Molybdate ABC transporter, ATP-binding protein	Azorhizobium caulinodans ORS 571 Gene: AZC_2370: Molybdate ABC transporter, ATP-binding protein	Bartonella quintana str. Toulouse	3 Bradyrhizobium japonicum USDA 110 Gene: bll1780: Molybdate ABC transporter, ATP-binding protein Gene: blr8162: Molybdate ABC transporter, ATP-binding protein Gene: blr6953: Molybdate ABC transporter, ATP-binding protein	Bradyrhizobium sp. BTAi1 Gene: BBta_2078: Molybdate ABC transporter, ATP-binding protein	Brucella melitensis 16M Gene: BMEII0003: Molybdate ABC transporter, ATP-binding protein	Mesorhizobium loti MAFF303099 Gene: mll1463: Molybdate ABC transporter, ATP-binding protein	Mesorhizobium sp. BNC1 Gene: Meso_2720: Molybdate ABC transporter, ATP-binding protein	Nitrobacter winogradskyi Nb-255 Gene: Nwi_0338: Molybdate ABC transporter, ATP-binding protein	Rhizobium etli CFN 42 Gene: RHE_CH04073: Molybdate ABC transporter, ATP-binding protein	Rhizobium leguminosarum bv. viciae 3841 Gene: RL4687: Molybdate ABC transporter, ATP-binding protein	Rhizobium sp. NGR234 Gene: NGR_c29860: Molybdate ABC transporter, ATP-binding protein	Rhodopseudomonas palustris CGA009 Gene: RPA4715: Molybdate ABC transporter, ATP-binding protein	Sinorhizobium meliloti 1021 Gene: SMc03198: Molybdate ABC transporter, ATP-binding protein	Xanthobacter autotrophicus Py2	Molybdate ABC transporter, ATP-binding protein
CRON 3.
groES	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	*4 Bradyrhizobium japonicum USDA 110 Gene: blr6978: Heat shock protein 60 family co-chaperone GroES Gene: blr5625: Heat shock protein 60 family co-chaperone GroES Gene: bsr7532: Heat shock protein 60 family co-chaperone GroES Site: position = -194 score = 3.88973 sequence = TGTCATTTTCACGACA Gene: bll2060: Heat shock protein 60 family co-chaperone GroES	Bradyrhizobium sp. BTAi1 Gene: BBta_1672: Heat shock protein 60 family co-chaperone GroES	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	2 Nitrobacter winogradskyi Nb-255 Gene: Nwi_2573: Heat shock protein 60 family co-chaperone GroES Gene: Nwi_2191: Heat shock protein 60 family co-chaperone GroES	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	2 Rhodopseudomonas palustris CGA009 Gene: RPA1141: Heat shock protein 60 family co-chaperone GroES Gene: RPA2165: Heat shock protein 60 family co-chaperone GroES	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Heat shock protein 60 family co-chaperone GroES
groEL	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	4 Bradyrhizobium japonicum USDA 110 Gene: blr6979: Heat shock protein 60 family chaperone GroEL Gene: blr7533: Heat shock protein 60 family chaperone GroEL Gene: bll2059: Heat shock protein 60 family chaperone GroEL Gene: blr5626: Heat shock protein 60 family chaperone GroEL	Bradyrhizobium sp. BTAi1 Gene: BBta_1671: Heat shock protein 60 family chaperone GroEL	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	2 Nitrobacter winogradskyi Nb-255 Gene: Nwi_2574: Heat shock protein 60 family chaperone GroEL Gene: Nwi_2192: Heat shock protein 60 family chaperone GroEL	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA1140: Heat shock protein 60 family chaperone GroEL	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Heat shock protein 60 family chaperone GroEL
CRON 4.
ompW	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu3191: Outer membrane protein W precursor	Azorhizobium caulinodans ORS 571 Gene: AZC_3742: Outer membrane protein W precursor	Bartonella quintana str. Toulouse	2 Bradyrhizobium japonicum USDA 110 Gene: bll1766: Outer membrane protein W precursor Gene: blr1311: Outer membrane protein W precursor	Bradyrhizobium sp. BTAi1 Gene: BBta_0946: Outer membrane protein W precursor	Brucella melitensis 16M Gene: BMEI0454: Outer membrane protein W precursor	* Mesorhizobium loti MAFF303099 Site: position = -194 score = 4.63177 sequence = TGTCGGATCTTCGACG Site: position = -177 score = 4.25224 sequence = AGTCGGACATGAGACA Gene: mll6127: Outer membrane protein W precursor	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_a02570: Outer membrane protein W precursor	Rhodopseudomonas palustris CGA009 Gene: RPA4502: Outer membrane protein W precursor	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_1968: Outer membrane protein W precursor	Outer membrane protein W precursor
CRON 5.
hupS	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_0598: Uptake hydrogenase small subunit precursor (EC 1.12.99.6)	Bartonella quintana str. Toulouse	*2 Bradyrhizobium japonicum USDA 110 Site: position = -186 score = 3.82714 sequence = CGTCGAAAACTGGACA Site: position = -34 score = 3.79861 sequence = CGTAACGCTGGCGACA Gene: blr1720: Uptake hydrogenase small subunit precursor (EC 1.12.99.6) Gene: bll6942: Uptake hydrogenase small subunit precursor (EC 1.12.99.6)	Bradyrhizobium sp. BTAi1 Gene: BBta_1996: Uptake hydrogenase small subunit precursor (EC 1.12.99.6)	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	* Rhodopseudomonas palustris CGA009 Site: position = -202 score = 3.71307 sequence = TGTCAGCGCCGCAACC Gene: RPA0962: Uptake hydrogenase small subunit precursor (EC 1.12.99.6)	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_2173: Uptake hydrogenase small subunit precursor (EC 1.12.99.6)	Uptake hydrogenase small subunit precursor (EC 1.12.99.6)
hupL	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_0599: Uptake hydrogenase large subunit (EC 1.12.99.6)	Bartonella quintana str. Toulouse	2 Bradyrhizobium japonicum USDA 110 Gene: blr1721: Uptake hydrogenase large subunit (EC 1.12.99.6) Gene: bll6941: Uptake hydrogenase large subunit (EC 1.12.99.6)	Bradyrhizobium sp. BTAi1 Gene: BBta_1997: Uptake hydrogenase large subunit (EC 1.12.99.6)	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA0963: Uptake hydrogenase large subunit (EC 1.12.99.6)	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_2174: Uptake hydrogenase large subunit (EC 1.12.99.6)	Uptake hydrogenase large subunit (EC 1.12.99.6)
hupC	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_0600: Ni,Fe-hydrogenase I cytochrome b subunit	Bartonella quintana str. Toulouse	2 Bradyrhizobium japonicum USDA 110 Gene: bll6940: Ni,Fe-hydrogenase I cytochrome b subunit Gene: blr1722: Ni,Fe-hydrogenase I cytochrome b subunit	Bradyrhizobium sp. BTAi1 Gene: BBta_1998: Ni,Fe-hydrogenase I cytochrome b subunit	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA0964: Ni,Fe-hydrogenase I cytochrome b subunit	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_2175: Ni,Fe-hydrogenase I cytochrome b subunit	Ni,Fe-hydrogenase I cytochrome b subunit
CRON 6.
nifH	Agrobacterium tumefaciens str. C58 (Cereon)	*2 Azorhizobium caulinodans ORS 571 Site: position = -284 score = 4.25305 sequence = TGTTTCCTTTCCAACA Site: position = -255 score = 4.78506 sequence = TGTCAGGTTCGAGACA Gene: AZC_3443: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Site: position = -281 score = 4.66604 sequence = TGTCGCGTTTGAAACA Gene: AZC_1041: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1769: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH	*2 Bradyrhizobium sp. BTAi1 Site: position = -267 score = 5.12639 sequence = TGTCGGGTTTGCAACA Gene: BBta_5879: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Site: position = -262 score = 5.12639 sequence = TGTCGGGTTTGCAACA Gene: BBta_5925: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -207 score = 4.26904 sequence = TGTCAGGGCCGCTACA Gene: mlr5905: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	*3 Rhizobium etli CFN 42 Site: position = -138 score = 4.00122 sequence = TTTCTGAAACCCAACA Site: position = -195 score = 4.95104 sequence = TGTCTGATCGGCGACA Gene: RHE_PD00308: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Site: position = -195 score = 4.95104 sequence = TGTCTGATCGGCGACA Site: position = -138 score = 4.00122 sequence = TTTCTGAAACCCAACA Gene: RHE_PD00202: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Site: position = -190 score = 3.90959 sequence = TGGCGGTTTCGAGACA Gene: RHE_PD00260: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH	* Rhizobium leguminosarum bv. viciae 3841 Site: position = -202 score = 4.78788 sequence = TGTCGGTTACGTGACA Site: position = -231 score = 4.2882 sequence = GGTCAGATATTCGACA Gene: pRL100162: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH	*2 Rhizobium sp. NGR234 Site: position = -211 score = 5.34069 sequence = TGTCGGCTCCGCGACA Gene: NGR_a01130: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Site: position = -208 score = 5.34069 sequence = TGTCGGCTCCGCGACA Gene: NGR_a00890: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH	* Rhodopseudomonas palustris CGA009 Site: position = -252 score = 4.42233 sequence = TGTCGGATTCTAAACA Gene: RPA4620: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH	* Sinorhizobium meliloti 1021 Site: position = -192 score = 5.04403 sequence = TGTCGGCTTAGCGACA Gene: SMa0825: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH	*2 Xanthobacter autotrophicus Py2 Site: position = -271 score = 4.33165 sequence = TGTCGCGTTCGACACA Site: position = -301 score = 4.26056 sequence = TGTTTTAATCCCGACA Gene: Xaut_0143: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Site: position = -358 score = 4.5443 sequence = CGTCGAACTTGCGACA Site: position = -233 score = 4.21163 sequence = TGTCGGGTTCTGAACA Gene: Xaut_0088: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH	Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
nifD	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_1040: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -155 score = 5.12639 sequence = TGTCGGATTCGCAACA Gene: blr1743: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	Bradyrhizobium sp. BTAi1 Gene: BBta_5924: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mlr5906: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	2 Rhizobium etli CFN 42 Gene: RHE_PD00307: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Gene: RHE_PD00201: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100161: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	2 Rhizobium sp. NGR234 Gene: NGR_a01120: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Gene: NGR_a00880: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	Rhodopseudomonas palustris CGA009 Gene: RPA4619: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	Sinorhizobium meliloti 1021 Gene: SMa0827: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	Xanthobacter autotrophicus Py2 Gene: Xaut_0089: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)	Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
nifK	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_1039: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1744: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	Bradyrhizobium sp. BTAi1 Gene: BBta_5923: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mlr5907: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	2 Rhizobium etli CFN 42 Gene: RHE_PD00306: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Gene: RHE_PD00200: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100160: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	2 Rhizobium sp. NGR234 Gene: NGR_a01110: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Gene: NGR_a00870: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	Rhodopseudomonas palustris CGA009 Gene: RPA4618: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	Sinorhizobium meliloti 1021 Gene: SMa0829: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	Xanthobacter autotrophicus Py2 Gene: Xaut_0090: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)	Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
nifE	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_1038: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1745: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE	Bradyrhizobium sp. BTAi1 Gene: BBta_5922: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mlr5908: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00199: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100159: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE	Rhizobium sp. NGR234 Gene: NGR_a01100: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE	*2 Rhodopseudomonas palustris CGA009 Site: position = -198 score = 4.47292 sequence = TGTCGGATTTTTGACG Site: position = -223 score = 4.40117 sequence = TGTCAGATTCACAACA Gene: RPA1373: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Gene: RPA4617: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE	Sinorhizobium meliloti 1021 Gene: SMa0830: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE	Xanthobacter autotrophicus Py2 Gene: Xaut_0091: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE	Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
nifN	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_1037: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1746: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN	Bradyrhizobium sp. BTAi1 Gene: BBta_5921: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mlr5909: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00198: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100158: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN	Rhizobium sp. NGR234 Gene: NGR_a01090: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN	2 Rhodopseudomonas palustris CGA009 Gene: RPA1372: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Gene: RPA4616: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN	Sinorhizobium meliloti 1021 Gene: SMa0873: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN	Xanthobacter autotrophicus Py2 Gene: Xaut_0092: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN	Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
nifX	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_1036: Nitrogenase FeMo-cofactor carrier protein NifX	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1747: Nitrogenase FeMo-cofactor carrier protein NifX	Bradyrhizobium sp. BTAi1 Gene: BBta_5920: Nitrogenase FeMo-cofactor carrier protein NifX	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mlr5911: Nitrogenase FeMo-cofactor carrier protein NifX	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00197: Nitrogenase FeMo-cofactor carrier protein NifX	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_a01080: Nitrogenase FeMo-cofactor carrier protein NifX	2 Rhodopseudomonas palustris CGA009 Gene: RPA1371: Nitrogenase FeMo-cofactor carrier protein NifX Gene: RPA4615: Nitrogenase FeMo-cofactor carrier protein NifX	Sinorhizobium meliloti 1021 Gene: SMa0831: Nitrogenase FeMo-cofactor carrier protein NifX	Xanthobacter autotrophicus Py2 Gene: Xaut_0093: Nitrogenase FeMo-cofactor carrier protein NifX	Nitrogenase FeMo-cofactor carrier protein NifX
PF03270	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_1035: Conserved hypothetical protein, probably related to nitrogen fixation protein	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1748: Conserved hypothetical protein, probably related to nitrogen fixation protein	Bradyrhizobium sp. BTAi1 Gene: BBta_5919: Conserved hypothetical protein, probably related to nitrogen fixation protein	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mlr5912: Conserved hypothetical protein, probably related to nitrogen fixation protein	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00304: Conserved hypothetical protein, probably related to nitrogen fixation protein	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_a01070: Conserved hypothetical protein, probably related to nitrogen fixation protein	Rhodopseudomonas palustris CGA009 Gene: RPA4614: Conserved hypothetical protein, probably related to nitrogen fixation protein	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0094: Conserved hypothetical protein, probably related to nitrogen fixation protein	Conserved hypothetical protein, probably related to nitrogen fixation protein
PF05082	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3451: Conserved hypothetical protein, probably related to nitrogen fixation protein	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bsr1749: Conserved hypothetical protein, probably related to nitrogen fixation protein	Bradyrhizobium sp. BTAi1 Gene: BBta_5918: Conserved hypothetical protein, probably related to nitrogen fixation protein	Brucella melitensis 16M	*2 Mesorhizobium loti MAFF303099 Site: position = -459 score = 4.21194 sequence = TGTCCAATTCACGACA Site: position = -217 score = 4.203 sequence = CGTCGCCAAATCGACA Gene: msr5868: Conserved hypothetical protein, probably related to nitrogen fixation protein Site: position = -77 score = 3.60698 sequence = GGTCGGCGATGTGACT Gene: msr5928: Conserved hypothetical protein, probably related to nitrogen fixation protein	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00303: Conserved hypothetical protein, probably related to nitrogen fixation protein	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA4613: Conserved hypothetical protein, probably related to nitrogen fixation protein	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0095: Conserved hypothetical protein, probably related to nitrogen fixation protein	Conserved hypothetical protein, probably related to nitrogen fixation protein
fdxB	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bsr1750: Nitrogenase specific ferredoxin III protein FdxB	Bradyrhizobium sp. BTAi1 Gene: BBta_5917: Nitrogenase specific ferredoxin III protein FdxB	Brucella melitensis 16M	2 Mesorhizobium loti MAFF303099 Gene: mlr5869: Nitrogenase specific ferredoxin III protein FdxB Gene: mlr5930: Nitrogenase specific ferredoxin III protein FdxB	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00302: Nitrogenase specific ferredoxin III protein FdxB	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100156: Nitrogenase specific ferredoxin III protein FdxB	Rhizobium sp. NGR234 Gene: NGR_a01050: Nitrogenase specific ferredoxin III protein FdxB	Rhodopseudomonas palustris CGA009 Gene: RPA4612: Nitrogenase specific ferredoxin III protein FdxB	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0096: Nitrogenase specific ferredoxin III protein FdxB	Nitrogenase specific ferredoxin III protein FdxB
nifQ	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3444: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1770: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ	Bradyrhizobium sp. BTAi1 Gene: BBta_5878: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mlr5871: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -176 score = 3.70601 sequence = TGTCCGTTTGGCGATA Gene: RHE_PD00259: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium sp. NGR234 Site: position = -228 score = 5.10598 sequence = TGTCAGAGAGCCGACA Site: position = -200 score = 4.9041 sequence = TGTCGTCCTTCCGACA Gene: NGR_a01190: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ	Rhodopseudomonas palustris CGA009 Gene: RPA4611: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0097: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ	Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
fdxN	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -142 score = 5.17024 sequence = TGTCGGGGGCGCGACA Site: position = -160 score = 5.34358 sequence = TGTCGCAGTCGCGACA Gene: AZC_1043: 4Fe-4S ferredoxin, nitrogenase-associated	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -257 score = 3.63782 sequence = TTTCGAGCTCGCTACA Gene: bll1075: 4Fe-4S ferredoxin, nitrogenase-associated	* Bradyrhizobium sp. BTAi1 Site: position = -141 score = 4.87359 sequence = TGTCGGGAGAGCGACA Site: position = -160 score = 5.39995 sequence = TGTCGCATCTGCGACA Gene: BBta_5932: 4Fe-4S ferredoxin, nitrogenase-associated	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: msl8750: 4Fe-4S ferredoxin, nitrogenase-associated	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00230: 4Fe-4S ferredoxin, nitrogenase-associated	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_a01280: 4Fe-4S ferredoxin, nitrogenase-associated	* Rhodopseudomonas palustris CGA009 Site: position = -129 score = 4.27653 sequence = TGTCGGGGGCCTTACA Site: position = -147 score = 5.07993 sequence = TGTCAGACTTGCGACA Gene: RPA4631: 4Fe-4S ferredoxin, nitrogenase-associated	Sinorhizobium meliloti 1021 Gene: SMa0811: 4Fe-4S ferredoxin, nitrogenase-associated	* Xanthobacter autotrophicus Py2 Site: position = -148 score = 5.34891 sequence = TGTCGCACTTGCGACA Gene: Xaut_0083: 4Fe-4S ferredoxin, nitrogenase-associated	4Fe-4S ferredoxin, nitrogenase-associated
nifB	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -138 score = 5.06497 sequence = TGTTGGCAACGCGACA Gene: AZC_3414: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1759: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB	* Bradyrhizobium sp. BTAi1 Site: position = -141 score = 5.03782 sequence = TGTTGGCAAGGCGACA Gene: BBta_5904: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -156 score = 5.07171 sequence = TGTCGGCGACCTGACA Gene: mll5855: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -139 score = 4.76552 sequence = TGTCGGAAGCTTGACA Gene: RHE_PD00229: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100195: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB	* Rhizobium sp. NGR234 Site: position = -144 score = 5.23209 sequence = TGTCGCGAATTCGACA Gene: NGR_a01270: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB	Rhodopseudomonas palustris CGA009 Gene: RPA4630: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB	* Sinorhizobium meliloti 1021 Site: position = -130 score = 5.42176 sequence = TGTCGGAAGTCCGACA Gene: SMa0814: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB	* Xanthobacter autotrophicus Py2 Site: position = -284 score = 4.05432 sequence = TGTCCCCGTGGGGACA Site: position = -141 score = 4.20195 sequence = TGTTGTTAAGCCGACA Gene: Xaut_0111: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB	Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
frxA	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3415: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bsr1760: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis	Bradyrhizobium sp. BTAi1 Gene: BBta_5903: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll5941: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA4629: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0112: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis	2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis
hesB	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3416: probable iron binding protein from the HesB_IscA_SufA family in Nif operon	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1 Gene: BBta_5902: probable iron binding protein from the HesB_IscA_SufA family in Nif operon	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA4628: probable iron binding protein from the HesB_IscA_SufA family in Nif operon	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0113: probable iron binding protein from the HesB_IscA_SufA family in Nif operon	probable iron binding protein from the HesB_IscA_SufA family in Nif operon
RPA4627	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3417: Conserved hypothetical protein, associated with nitrogen fixation genes	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1 Gene: BBta_5901: Conserved hypothetical protein, associated with nitrogen fixation genes	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA4627: Conserved hypothetical protein, associated with nitrogen fixation genes	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0114: Conserved hypothetical protein, associated with nitrogen fixation genes	Conserved hypothetical protein, associated with nitrogen fixation genes
PF05484	Agrobacterium tumefaciens str. C58 (Cereon)	2 Azorhizobium caulinodans ORS 571 Gene: AZC_1048: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis Gene: AZC_3418: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1 Gene: BBta_5900: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA4626: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis	Sinorhizobium meliloti 1021	2 Xanthobacter autotrophicus Py2 Gene: Xaut_0115: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis Gene: Xaut_0138: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis	LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis
nifZ	Agrobacterium tumefaciens str. C58 (Cereon)	2 Azorhizobium caulinodans ORS 571 Gene: AZC_3420: Nitrogen fixation protein NifZ Gene: AZC_3419: Nitrogen fixation protein NifZ	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1761: Nitrogen fixation protein NifZ	2 Bradyrhizobium sp. BTAi1 Gene: BBta_5899: Nitrogen fixation protein NifZ Gene: BBta_5898: Nitrogen fixation protein NifZ	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll5854: Nitrogen fixation protein NifZ	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_a01290: Nitrogen fixation protein NifZ	2 Rhodopseudomonas palustris CGA009 Gene: RPA4625: Nitrogen fixation protein NifZ Gene: RPA4624: Nitrogen fixation protein NifZ	Sinorhizobium meliloti 1021	2 Xanthobacter autotrophicus Py2 Gene: Xaut_0116: Nitrogen fixation protein NifZ Gene: Xaut_0117: Nitrogen fixation protein NifZ	Nitrogen fixation protein NifZ
nifT	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3412: Nitrogen fixation protein NifT	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bsr1757: Nitrogen fixation protein NifT	Bradyrhizobium sp. BTAi1 Gene: BBta_5906: Nitrogen fixation protein NifT	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: msl5852: Nitrogen fixation protein NifT	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_a01300: Nitrogen fixation protein NifT	Rhodopseudomonas palustris CGA009 Gene: RPA4623: Nitrogen fixation protein NifT	Sinorhizobium meliloti 1021 Gene: SMa0810: Nitrogen fixation protein NifT	Xanthobacter autotrophicus Py2 Gene: Xaut_0109: Nitrogen fixation protein NifT	Nitrogen fixation protein NifT
irr	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3445: Iron-responsive regulator Irr, Fur family	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1216: Iron-responsive regulator Irr, Fur family	Bradyrhizobium sp. BTAi1 Gene: BBta_5877: Iron-responsive regulator Irr, Fur family	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Iron-responsive regulator Irr, Fur family
nifV	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3389: Homocitrate synthase (EC 2.3.3.14)	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1 Gene: BBta_5875: Homocitrate synthase (EC 2.3.3.14)	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA4607: Homocitrate synthase (EC 2.3.3.14)	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0150: Homocitrate synthase (EC 2.3.3.14)	Homocitrate synthase (EC 2.3.3.14)
nifP	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3388: Serine acetyltransferase (EC 2.3.1.30)	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1 Gene: BBta_5874: Serine acetyltransferase (EC 2.3.1.30)	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0151: Serine acetyltransferase (EC 2.3.1.30)	Serine acetyltransferase (EC 2.3.1.30)
nifW	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -192 score = 4.11279 sequence = TGTCGCCTTCGGGGCA Gene: AZC_3446: Nitrogenase stabilizing/protective protein NifW	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -495 score = 4.29964 sequence = TGTCGCATTTGCCACG Gene: blr1771: Nitrogenase stabilizing/protective protein NifW	Bradyrhizobium sp. BTAi1 Gene: BBta_5873: Nitrogenase stabilizing/protective protein NifW	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll5864: Nitrogenase stabilizing/protective protein NifW	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00223: Nitrogenase stabilizing/protective protein NifW	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_a00940: Nitrogenase stabilizing/protective protein NifW	Rhodopseudomonas palustris CGA009 Gene: RPA4606: Nitrogenase stabilizing/protective protein NifW	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0152: Nitrogenase stabilizing/protective protein NifW	Nitrogenase stabilizing/protective protein NifW
fixB	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -113 score = 4.22686 sequence = TGTGGCATGCCAGACA Site: position = -179 score = 5.02419 sequence = TGTCGCATTCCCGACG Gene: AZC_3447: Electron transfer flavoprotein, beta subunit	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr2038: Electron transfer flavoprotein, beta subunit	* Bradyrhizobium sp. BTAi1 Site: position = -171 score = 5.02419 sequence = TGTCGCATTCCCGACG Gene: BBta_5872: Electron transfer flavoprotein, beta subunit	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -161 score = 5.24137 sequence = TGTCGAAAAGCCGACA Gene: mll5862: Electron transfer flavoprotein, beta subunit	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -156 score = 4.59353 sequence = TGTCGGGAAGCTTACA Gene: RHE_PD00224: Electron transfer flavoprotein, beta subunit	* Rhizobium leguminosarum bv. viciae 3841 Site: position = -148 score = 4.89893 sequence = TGTCGGCAACCCTACA Gene: pRL100200: Electron transfer flavoprotein, beta subunit	* Rhizobium sp. NGR234 Site: position = -162 score = 4.76202 sequence = TGTCATGAAGCCGACA Gene: NGR_a01220: Electron transfer flavoprotein, beta subunit	* Rhodopseudomonas palustris CGA009 Site: position = -184 score = 5.48724 sequence = TGTCGCCTTCCCGACA Gene: RPA4605: Electron transfer flavoprotein, beta subunit	* Sinorhizobium meliloti 1021 Site: position = -244 score = 4.86295 sequence = TGTCGGCCCCTCGACA Gene: SMa0822: Electron transfer flavoprotein, beta subunit	* Xanthobacter autotrophicus Py2 Site: position = -262 score = 4.17006 sequence = CGTCGCAATTGTGACG Site: position = -180 score = 5.18183 sequence = TGTCGCCTTCCTGACA Gene: Xaut_0142: Electron transfer flavoprotein, beta subunit	Electron transfer flavoprotein, beta subunit
fixA	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3448: Electron transfer flavoprotein, alpha subunit	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1773: Electron transfer flavoprotein, alpha subunit	Bradyrhizobium sp. BTAi1 Gene: BBta_5871: Electron transfer flavoprotein, alpha subunit	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll5861: Electron transfer flavoprotein, alpha subunit	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00225: Electron transfer flavoprotein, alpha subunit	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100199: Electron transfer flavoprotein, alpha subunit	Rhizobium sp. NGR234 Gene: NGR_a01230: Electron transfer flavoprotein, alpha subunit	Rhodopseudomonas palustris CGA009 Gene: RPA4604: Electron transfer flavoprotein, alpha subunit	Sinorhizobium meliloti 1021 Gene: SMa0819: Electron transfer flavoprotein, alpha subunit	Xanthobacter autotrophicus Py2 Gene: Xaut_0141: Electron transfer flavoprotein, alpha subunit	Electron transfer flavoprotein, alpha subunit
fixC	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3449: Electron-transferring-flavoprotein dehydrogenase	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1774: Electron-transferring-flavoprotein dehydrogenase	Bradyrhizobium sp. BTAi1 Gene: BBta_5870: Electron-transferring-flavoprotein dehydrogenase	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll5860: Electron-transferring-flavoprotein dehydrogenase	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00226: Electron-transferring-flavoprotein dehydrogenase	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100198: Electron-transferring-flavoprotein dehydrogenase	Rhizobium sp. NGR234 Gene: NGR_a01240: Electron-transferring-flavoprotein dehydrogenase	Rhodopseudomonas palustris CGA009 Gene: RPA4603: Electron-transferring-flavoprotein dehydrogenase	Sinorhizobium meliloti 1021 Gene: SMa0817: Electron-transferring-flavoprotein dehydrogenase	Xanthobacter autotrophicus Py2 Gene: Xaut_0140: Electron-transferring-flavoprotein dehydrogenase	Electron-transferring-flavoprotein dehydrogenase
fixX	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3450: Ferredoxin-like protein, FixX	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bsr1775: Ferredoxin-like protein, FixX	Bradyrhizobium sp. BTAi1 Gene: BBta_5869: Ferredoxin-like protein, FixX	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: msl5859: Ferredoxin-like protein, FixX	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00227: Ferredoxin-like protein, FixX	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100197: Ferredoxin-like protein, FixX	Rhizobium sp. NGR234 Gene: NGR_a01250: Ferredoxin-like protein, FixX	Rhodopseudomonas palustris CGA009 Gene: RPA4602: Ferredoxin-like protein, FixX	Sinorhizobium meliloti 1021 Gene: SMa0816: Ferredoxin-like protein, FixX	Xanthobacter autotrophicus Py2 Gene: Xaut_0139: Ferredoxin-like protein, FixX	Ferredoxin-like protein, FixX
nifA	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_1049: Nitrogen fixation transcriptional regulator NifA, Fis family	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -39 score = 3.84948 sequence = TGTCATCTCGTCAACA Gene: blr2037: Nitrogen fixation transcriptional regulator NifA, Fis family	* Bradyrhizobium sp. BTAi1 Site: position = -64 score = 4.03687 sequence = TGTTAGAACGCCTACA Gene: BBta_5933: Nitrogen fixation transcriptional regulator NifA, Fis family	Brucella melitensis 16M	2 Mesorhizobium loti MAFF303099 Gene: mll5837: Nitrogen fixation transcriptional regulator NifA, Fis family Gene: mll5857: Nitrogen fixation transcriptional regulator NifA, Fis family	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00228: Nitrogen fixation transcriptional regulator NifA, Fis family	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100196: Nitrogen fixation transcriptional regulator NifA, Fis family	Rhizobium sp. NGR234 Gene: NGR_a01260: Nitrogen fixation transcriptional regulator NifA, Fis family	Rhodopseudomonas palustris CGA009 Gene: RPA4632: Nitrogen fixation transcriptional regulator NifA, Fis family	Sinorhizobium meliloti 1021 Gene: SMa0815: Nitrogen fixation transcriptional regulator NifA, Fis family	* Xanthobacter autotrophicus Py2 Site: position = -56 score = 4.05681 sequence = TGTCGCTAATCATACA Gene: Xaut_0082: Nitrogen fixation transcriptional regulator NifA, Fis family	Nitrogen fixation transcriptional regulator NifA, Fis family
iscN	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -116 score = 4.33203 sequence = GGTCTGCTTCGCGACA Site: position = -134 score = 5.48508 sequence = TGTCGCAAAGGCGACA Gene: AZC_3409: Fe-S cofactor nitrogenase synthesis protein IscN	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -116 score = 5.24541 sequence = TGTCAGGAACCCGACA Gene: blr1755: Fe-S cofactor nitrogenase synthesis protein IscN	* Bradyrhizobium sp. BTAi1 Site: position = -112 score = 4.3018 sequence = CGTCGGAAACGCCACA Site: position = -190 score = 4.84525 sequence = TGTCGGATTTGCGCCA Site: position = -130 score = 5.24137 sequence = TGTCGGAAAGTCGACA Gene: BBta_5909: Fe-S cofactor nitrogenase synthesis protein IscN	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -115 score = 4.56125 sequence = TGTTGGATGTGAGACA Site: position = -133 score = 4.84352 sequence = TGTCCGACATCCGACA Gene: mll5942: Fe-S cofactor nitrogenase synthesis protein IscN	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium sp. NGR234 Site: position = -114 score = 4.05391 sequence = TGTCGTACAAACGACA Gene: NGR_a01210: Fe-S cofactor nitrogenase synthesis protein IscN	* Rhodopseudomonas palustris CGA009 Site: position = -123 score = 5.27521 sequence = TGTCGGACCTCCGACA Site: position = -140 score = 4.01849 sequence = CGTCGGCTTCACGACG Gene: RPA4610: Fe-S cofactor nitrogenase synthesis protein IscN	Sinorhizobium meliloti 1021	*2 Xanthobacter autotrophicus Py2 Site: position = -122 score = 5.51223 sequence = TGTCGCATTCGCGACA Gene: Xaut_0149: Fe-S cofactor nitrogenase synthesis protein IscN Site: position = -115 score = 4.11853 sequence = CGTCGCAAAGACAACA Site: position = -133 score = 4.3844 sequence = TGTCCGGAATCGGACA Gene: Xaut_0106: Fe-S cofactor nitrogenase synthesis protein IscN	Fe-S cofactor nitrogenase synthesis protein IscN
nifU	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3410: Iron-sulfur cluster assembly scaffold protein NifU	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1 Gene: BBta_5908: Iron-sulfur cluster assembly scaffold protein NifU	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00221: Iron-sulfur cluster assembly scaffold protein NifU	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA4609: Iron-sulfur cluster assembly scaffold protein NifU	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0107: Iron-sulfur cluster assembly scaffold protein NifU	Iron-sulfur cluster assembly scaffold protein NifU
nifS	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3411: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1756: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily	Bradyrhizobium sp. BTAi1 Gene: BBta_5907: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll5865: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00222: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium sp. NGR234 Site: position = -282 score = 3.77786 sequence = TCGCGCGAGGGCGACA Gene: NGR_a00930: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily	Rhodopseudomonas palustris CGA009 Gene: RPA4608: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0108: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily	Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
orf110	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	* Sinorhizobium meliloti 1021 Site: position = -194 score = 5.06243 sequence = TGTCAGGTCCGCGACA Gene: SMa0872: Hypothetical protein ORF 110	Xanthobacter autotrophicus Py2	Hypothetical protein ORF 110
CRON 7.
fixR	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -126 score = 3.93082 sequence = TGTCTTGAATGCGCCA Site: position = -106 score = 3.82711 sequence = TTCCGCGTGCGCGACA Gene: blr2036: Oxidoreductase, short chain dehydrogenase/reductase family	* Bradyrhizobium sp. BTAi1 Site: position = -151 score = 5.09242 sequence = TGTCGTGAATGCGACA Gene: BBta_5935: Oxidoreductase, short chain dehydrogenase/reductase family	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	* Rhodopseudomonas palustris CGA009 Site: position = -161 score = 4.57477 sequence = TGTCGCAAAGCCAACG Site: position = -118 score = 3.69392 sequence = TGTCGTTGTGATGACA Gene: RPA4633: Oxidoreductase, short chain dehydrogenase/reductase family	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Oxidoreductase, short chain dehydrogenase/reductase family
CRON 8.
cpxP	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -265 score = 4.00506 sequence = TATGGCGATGCCGACA Gene: blr2144: Cytochrome P450 protein CpxP	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -331 score = 3.62019 sequence = TGTCAAATCCGCATCA Gene: mlr6364: Cytochrome P450 protein CpxP	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00252: Cytochrome P450 protein CpxP	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium sp. NGR234 Site: position = -183 score = 5.33141 sequence = TGTCGCGTCCGCGACA Gene: NGR_a02700: Cytochrome P450 protein CpxP	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Cytochrome P450 protein CpxP
cpxR	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr2145: Putative cytochrome P450 hydroxylase	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mlr6365: Putative cytochrome P450 hydroxylase	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00251: Putative cytochrome P450 hydroxylase	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234 Gene: NGR_a02710: Putative cytochrome P450 hydroxylase	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Putative cytochrome P450 hydroxylase
CRON 9.
cpx1	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	* Bradyrhizobium japonicum USDA 110 Site: position = -129 score = 4.3442 sequence = TGTCGGCATTGAGACT Site: position = -110 score = 4.2366 sequence = TGCCAGAAACCTGACA Gene: blr2143: Cytochrome P450-family protein	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Cytochrome P450-family protein
CRON 10.
rpoN	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu0332: RNA polymerase sigma-54 factor RpoN	Azorhizobium caulinodans ORS 571 Gene: AZC_3925: RNA polymerase sigma-54 factor RpoN	Bartonella quintana str. Toulouse	*2 Bradyrhizobium japonicum USDA 110 Site: position = -376 score = 4.19126 sequence = TGTCTGAGTGGCGGCA Gene: blr1883: RNA polymerase sigma-54 factor RpoN Gene: blr0723: RNA polymerase sigma-54 factor RpoN	* Bradyrhizobium sp. BTAi1 Site: position = -184 score = 4.86268 sequence = TGTCGCGGGTGTGACA Gene: BBta_0121: RNA polymerase sigma-54 factor RpoN	Brucella melitensis 16M Gene: BMEI1789: RNA polymerase sigma-54 factor RpoN	2 Mesorhizobium loti MAFF303099 Gene: mll3196: RNA polymerase sigma-54 factor RpoN Gene: mll5872: RNA polymerase sigma-54 factor RpoN	Mesorhizobium sp. BNC1 Gene: Meso_3667: RNA polymerase sigma-54 factor RpoN	Nitrobacter winogradskyi Nb-255 Gene: Nwi_0177: RNA polymerase sigma-54 factor RpoN	2 Rhizobium etli CFN 42 Gene: RHE_CH00404: RNA polymerase sigma-54 factor RpoN Gene: RHE_PD00218: RNA polymerase sigma-54 factor RpoN	Rhizobium leguminosarum bv. viciae 3841 Gene: RL0422: RNA polymerase sigma-54 factor RpoN	Rhizobium sp. NGR234 Gene: NGR_c00170: RNA polymerase sigma-54 factor RpoN	Rhodopseudomonas palustris CGA009 Gene: RPA0050: RNA polymerase sigma-54 factor RpoN	Sinorhizobium meliloti 1021 Gene: SMc01139: RNA polymerase sigma-54 factor RpoN	Xanthobacter autotrophicus Py2 Gene: Xaut_0064: RNA polymerase sigma-54 factor RpoN	RNA polymerase sigma-54 factor RpoN
CRON 11.
fer2	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -67 score = 3.78087 sequence = TGTGGGGCCTCCGGCA Gene: AZC_0303: Ferredoxin, 2Fe-2S (AaFd4)	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr1765: Ferredoxin, 2Fe-2S (AaFd4)	* Bradyrhizobium sp. BTAi1 Site: position = -325 score = 3.63791 sequence = TGTCGACATCCGAACG Gene: BBta_5882: Ferredoxin, 2Fe-2S (AaFd4)	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	* Xanthobacter autotrophicus Py2 Site: position = -163 score = 3.60222 sequence = TGTCGCTTTCCCGCCC Gene: Xaut_2332: Ferredoxin, 2Fe-2S (AaFd4)	Ferredoxin, 2Fe-2S (AaFd4)
CRON 12.
xdhC	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -190 score = 4.28867 sequence = TGTCGGGAACCCGCCG Site: position = -235 score = 5.55794 sequence = TGTCGGCTTTCCGACA Gene: AZC_1052: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	* Bradyrhizobium sp. BTAi1 Site: position = -255 score = 5.09242 sequence = TGTCGCATTCACGACA Gene: BBta_5936: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	* Rhodopseudomonas palustris CGA009 Site: position = -111 score = 4.57477 sequence = CGTTGGCTTTGCGACA Gene: RPA4634: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family	Sinorhizobium meliloti 1021	* Xanthobacter autotrophicus Py2 Site: position = -74 score = 5.06116 sequence = TGTCGCAAAGGAGACA Gene: Xaut_0125: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family	Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
CRON 13.
cheY	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -192 score = 4.78506 sequence = TGTCTCGAACCTGACA Site: position = -163 score = 4.25305 sequence = TGTTGGAAAGGAAACA Gene: AZC_3442: Predicted response regulator receiver protein	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	* Bradyrhizobium sp. BTAi1 Site: position = -168 score = 5.12639 sequence = TGTTGCAAACCCGACA Gene: BBta_5880: Predicted response regulator receiver protein	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	* Rhodopseudomonas palustris CGA009 Site: position = -147 score = 4.51197 sequence = TGTCAGGTTTGCGACC Gene: RPA1001: Predicted response regulator receiver protein	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0144: Predicted response regulator receiver protein	Predicted response regulator receiver protein
nifO	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_3441: Nitrogenase-associated protein NifO	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bll1767: Nitrogenase-associated protein NifO	Bradyrhizobium sp. BTAi1 Gene: BBta_5881: Nitrogenase-associated protein NifO	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA1000: Nitrogenase-associated protein NifO	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2 Gene: Xaut_0145: Nitrogenase-associated protein NifO	Nitrogenase-associated protein NifO
CRON 14.
ahpC1	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu2399: Alkyl hydroperoxide reductase protein (EC 1.6.4.-)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse Gene: BQ10800: Alkyl hydroperoxide reductase protein (EC 1.6.4.-)	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -482 score = 4.09013 sequence = GGTCCGACTTCCGACA Site: position = -462 score = 3.87024 sequence = TGTCCAGCTTCGGACA Gene: mll5873: Alkyl hydroperoxide reductase protein (EC 1.6.4.-)	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -407 score = 3.69774 sequence = TGTCGGACCTCAAACT Gene: RHE_PD00217: Alkyl hydroperoxide reductase protein (EC 1.6.4.-)	Rhizobium leguminosarum bv. viciae 3841	*2 Rhizobium sp. NGR234 Site: position = -273 score = 4.9041 sequence = TGTCGGAAGGACGACA Site: position = -245 score = 5.10598 sequence = TGTCGGCTCTCTGACA Gene: NGR_a01200: Alkyl hydroperoxide reductase protein (EC 1.6.4.-) Gene: NGR_c24970: Alkyl hydroperoxide reductase protein (EC 1.6.4.-)	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMc01834: Alkyl hydroperoxide reductase protein (EC 1.6.4.-)	Xanthobacter autotrophicus Py2	Alkyl hydroperoxide reductase protein (EC 1.6.4.-)
CRON 15.
bolA	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu1851: BolA protein, predicted transcription regulator	*2 Azorhizobium caulinodans ORS 571 Gene: AZC_2232: BolA protein, predicted transcription regulator Site: position = -128 score = 5.37101 sequence = TGTCGCATGTGCGACA Site: position = -121 score = 4.0847 sequence = TGTGCGACATGCGACA Gene: AZC_3437: BolA protein, predicted transcription regulator	Bartonella quintana str. Toulouse Gene: BQ07510: BolA protein, predicted transcription regulator	Bradyrhizobium japonicum USDA 110 Gene: bsl5715: BolA protein, predicted transcription regulator	*2 Bradyrhizobium sp. BTAi1 Site: position = -139 score = 4.96062 sequence = TGTCGCAAAGGCGACG Gene: BBta_5884: BolA protein, predicted transcription regulator Gene: BBta_5397: BolA protein, predicted transcription regulator	Brucella melitensis 16M Gene: BMEI1128: BolA protein, predicted transcription regulator	Mesorhizobium loti MAFF303099 Gene: msl0055: BolA protein, predicted transcription regulator	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255 Gene: Nwi_1309: BolA protein, predicted transcription regulator	Rhizobium etli CFN 42 Gene: RHE_CH02287: BolA protein, predicted transcription regulator	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009 Gene: RPA1600: BolA protein, predicted transcription regulator	Sinorhizobium meliloti 1021 Gene: SMc00487: BolA protein, predicted transcription regulator	*2 Xanthobacter autotrophicus Py2 Site: position = -103 score = 5.06116 sequence = TGTCTCCTTTGCGACA Gene: Xaut_0124: BolA protein, predicted transcription regulator Gene: Xaut_4089: BolA protein, predicted transcription regulator	BolA protein, predicted transcription regulator
grlA	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu1854: Glutaredoxin-related protein	2 Azorhizobium caulinodans ORS 571 Gene: AZC_2234: Glutaredoxin-related protein Gene: AZC_3438: Glutaredoxin-related protein	Bartonella quintana str. Toulouse Gene: BQ07520: Glutaredoxin-related protein	Bradyrhizobium japonicum USDA 110 Gene: bll5711: Glutaredoxin-related protein	2 Bradyrhizobium sp. BTAi1 Gene: BBta_5883: Glutaredoxin-related protein Gene: BBta_5393: Glutaredoxin-related protein	Brucella melitensis 16M Gene: BMEI1129: Glutaredoxin-related protein	Mesorhizobium loti MAFF303099 Gene: mll0053: Glutaredoxin-related protein	Mesorhizobium sp. BNC1	* Nitrobacter winogradskyi Nb-255 Site: position = -112 score = 3.61453 sequence = TGTGACAACCCCGGCA Gene: Nwi_1312: Glutaredoxin-related protein	Rhizobium etli CFN 42 Gene: RHE_CH02304: Glutaredoxin-related protein	Rhizobium leguminosarum bv. viciae 3841 Gene: RL2615: Glutaredoxin-related protein	Rhizobium sp. NGR234 Gene: NGR_c16290: Glutaredoxin-related protein	Rhodopseudomonas palustris CGA009 Gene: RPA1606: Glutaredoxin-related protein	Sinorhizobium meliloti 1021 Gene: SMc00538: Glutaredoxin-related protein	2 Xanthobacter autotrophicus Py2 Gene: Xaut_0123: Glutaredoxin-related protein Gene: Xaut_4088: Glutaredoxin-related protein	Glutaredoxin-related protein
CRON 16.
ahpC	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -161 score = 5.55794 sequence = TGTCGGAAAGCCGACA Site: position = -206 score = 4.28867 sequence = CGGCGGGTTCCCGACA Gene: AZC_1051: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bll1777: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	* Bradyrhizobium sp. BTAi1 Site: position = -105 score = 5.24137 sequence = TGTCGACTTTCCGACA Gene: BBta_5863: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Brucella melitensis 16M Gene: BMEII0577: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
ahpD	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_1050: Alkylhydroperoxidase protein D	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: bll1776: Alkylhydroperoxidase protein D	Bradyrhizobium sp. BTAi1 Gene: BBta_5864: Alkylhydroperoxidase protein D	Brucella melitensis 16M Gene: BMEII0578: Alkylhydroperoxidase protein D	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Alkylhydroperoxidase protein D

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