Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nifQ gene

Properties
Regulog: NifA - Rhizobiales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Phylum: Proteobacteria/alpha
Built upon 130 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bradyrhizobium sp. BTAi1
Position: -267
Score: 5.12639
Sequence: TGTCGGGTTTGCAACA
Locus tag: BBta_5879
Name: nifH
Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Locus tag: BBta_5878
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
Locus tag: BBta_5877
Name: irr
Funciton: Iron-responsive regulator Irr, Fur family
Locus tag: BBta_5875
Name: nifV
Funciton: Homocitrate synthase (EC 2.3.3.14)
Locus tag: BBta_5874
Name: nifP
Funciton: Serine acetyltransferase (EC 2.3.1.30)
Locus tag: BBta_5873
Name: nifW
Funciton: Nitrogenase stabilizing/protective protein NifW
nifH-nifQ-irr-nifV-nifP-nifW -267 5.1 TGTCGGGTTTGCAACA BBta_5879
Mesorhizobium loti MAFF303099
Position: -459
Score: 4.21194
Sequence: TGTCCAATTCACGACA
Position: -217
Score: 4.203
Sequence: CGTCGCCAAATCGACA
Locus tag: msr5868
Name: PF05082
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: mlr5869
Name: fdxB
Funciton: Nitrogenase specific ferredoxin III protein FdxB
Locus tag: mlr5871
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
PF05082-fdxB-nifQ -459 4.2 TGTCCAATTCACGACA msr5868
-217 4.2 CGTCGCCAAATCGACA
Rhizobium etli CFN 42
Position: -176
Score: 3.70601
Sequence: TGTCCGTTTGGCGATA
Locus tag: RHE_PD00259
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
nifQ -176 3.7 TGTCCGTTTGGCGATA RHE_PD00259
Rhizobium sp. NGR234
Position: -228
Score: 5.10598
Sequence: TGTCAGAGAGCCGACA
Position: -200
Score: 4.9041
Sequence: TGTCGTCCTTCCGACA
Locus tag: NGR_a01190
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
nifQ -228 5.1 TGTCAGAGAGCCGACA NGR_a01190
-200 4.9 TGTCGTCCTTCCGACA
Rhodopseudomonas palustris CGA009
Position: -252
Score: 4.42233
Sequence: TGTCGGATTCTAAACA
Locus tag: RPA4620
Name: nifH
Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Locus tag: RPA4619
Name: nifD
Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
Locus tag: RPA4618
Name: nifK
Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
Locus tag: RPA4617
Name: nifE
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Locus tag: RPA4616
Name: nifN
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
Locus tag: RPA4615
Name: nifX
Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
Locus tag: RPA4614
Name: PF03270
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: RPA4613
Name: PF05082
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: RPA4612
Name: fdxB
Funciton: Nitrogenase specific ferredoxin III protein FdxB
Locus tag: RPA4611
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
nifH-nifD-nifK-nifE-nifN-nifX-PF03270-PF05082-fdxB-nifQ -252 4.4 TGTCGGATTCTAAACA RPA4620
Xanthobacter autotrophicus Py2
Position: -358
Score: 4.5443
Sequence: CGTCGAACTTGCGACA
Position: -233
Score: 4.21163
Sequence: TGTCGGGTTCTGAACA
Locus tag: Xaut_0088
Name: nifH
Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Locus tag: Xaut_0089
Name: nifD
Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
Locus tag: Xaut_0090
Name: nifK
Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
Locus tag: Xaut_0091
Name: nifE
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Locus tag: Xaut_0092
Name: nifN
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
Locus tag: Xaut_0093
Name: nifX
Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
Locus tag: Xaut_0094
Name: PF03270
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: Xaut_0095
Name: PF05082
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: Xaut_0096
Name: fdxB
Funciton: Nitrogenase specific ferredoxin III protein FdxB
Locus tag: Xaut_0097
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
nifH-nifD-nifK-nifE-nifN-nifX-PF03270-PF05082-fdxB-nifQ -358 4.5 CGTCGAACTTGCGACA Xaut_0088
-233 4.2 TGTCGGGTTCTGAACA
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