Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing iscN gene

Properties
Regulog: NifA - Rhizobiales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Phylum: Proteobacteria/alpha
Built upon 130 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azorhizobium caulinodans ORS 571
Position: -134
Score: 5.48508
Sequence: TGTCGCAAAGGCGACA
Position: -116
Score: 4.33203
Sequence: GGTCTGCTTCGCGACA
Locus tag: AZC_3409
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: AZC_3410
Name: nifU
Funciton: Iron-sulfur cluster assembly scaffold protein NifU
Locus tag: AZC_3411
Name: nifS
Funciton: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
Locus tag: AZC_3412
Name: nifT
Funciton: Nitrogen fixation protein NifT
iscN-nifU-nifS-nifT -134 5.5 TGTCGCAAAGGCGACA AZC_3409
-116 4.3 GGTCTGCTTCGCGACA
Bradyrhizobium japonicum USDA 110
Position: -116
Score: 5.24541
Sequence: TGTCAGGAACCCGACA
Locus tag: blr1755
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
iscN -116 5.2 TGTCAGGAACCCGACA blr1755
Bradyrhizobium sp. BTAi1
Position: -190
Score: 4.84525
Sequence: TGTCGGATTTGCGCCA
Position: -130
Score: 5.24137
Sequence: TGTCGGAAAGTCGACA
Position: -112
Score: 4.3018
Sequence: CGTCGGAAACGCCACA
Locus tag: BBta_5909
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: BBta_5908
Name: nifU
Funciton: Iron-sulfur cluster assembly scaffold protein NifU
Locus tag: BBta_5907
Name: nifS
Funciton: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
Locus tag: BBta_5906
Name: nifT
Funciton: Nitrogen fixation protein NifT
iscN-nifU-nifS-nifT -190 4.8 TGTCGGATTTGCGCCA BBta_5909
-130 5.2 TGTCGGAAAGTCGACA
-112 4.3 CGTCGGAAACGCCACA
Mesorhizobium loti MAFF303099
Position: -133
Score: 4.84352
Sequence: TGTCCGACATCCGACA
Position: -115
Score: 4.56125
Sequence: TGTTGGATGTGAGACA
Locus tag: mll5942
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: mll5941
Name: frxA
Funciton: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis
iscN-frxA -133 4.8 TGTCCGACATCCGACA mll5942
-115 4.6 TGTTGGATGTGAGACA
Rhizobium sp. NGR234
Position: -114
Score: 4.05391
Sequence: TGTCGTACAAACGACA
Locus tag: NGR_a01210
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
iscN -114 4.1 TGTCGTACAAACGACA NGR_a01210
Rhodopseudomonas palustris CGA009
Position: -140
Score: 4.01849
Sequence: CGTCGGCTTCACGACG
Position: -123
Score: 5.27521
Sequence: TGTCGGACCTCCGACA
Locus tag: RPA4610
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: RPA4609
Name: nifU
Funciton: Iron-sulfur cluster assembly scaffold protein NifU
Locus tag: RPA4608
Name: nifS
Funciton: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
Locus tag: RPA4607
Name: nifV
Funciton: Homocitrate synthase (EC 2.3.3.14)
Locus tag: RPA4606
Name: nifW
Funciton: Nitrogenase stabilizing/protective protein NifW
iscN-nifU-nifS-nifV-nifW -140 4 CGTCGGCTTCACGACG RPA4610
-123 5.3 TGTCGGACCTCCGACA
Xanthobacter autotrophicus Py2
Position: -133
Score: 4.3844
Sequence: TGTCCGGAATCGGACA
Position: -115
Score: 4.11853
Sequence: CGTCGCAAAGACAACA
Locus tag: Xaut_0106
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: Xaut_0107
Name: nifU
Funciton: Iron-sulfur cluster assembly scaffold protein NifU
Locus tag: Xaut_0108
Name: nifS
Funciton: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
Locus tag: Xaut_0109
Name: nifT
Funciton: Nitrogen fixation protein NifT
iscN-nifU-nifS-nifT -133 4.4 TGTCCGGAATCGGACA Xaut_0106
-115 4.1 CGTCGCAAAGACAACA
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