Regulon of NifA in Rhizobium etli CFN 42

Properties
Regulator type:	Transcription factor
TF locus tag:	RHE_PD00228
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen fixation
Effector:
Regulog:	NifA - Rhizobiales
Statistics of regulated genes:
- Genes	19
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 130 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By trascription factor - NifA
By TF family - Fis
By pathway - Nitrogen fixation

Regulated operons
	Locus Tag	Name	Function
Position: -407 Score: 3.7 Sequence: TGTCGGACCTCAAACT Locus tag: RHE_PD00217 Name: ahpC1 Funciton: Alkyl hydroperoxide reductase protein (EC 1.6.4.-)
	RHE_PD00217	ahpC1	Alkyl hydroperoxide reductase protein (EC 1.6.4.-)
Position: -193 Score: 4.8 Sequence: TGTTAGATACGCGACA Locus tag: RHE_PD00215 Name: cpxA Funciton: Cytochrome P450 monooxygenase protein
	RHE_PD00215	cpxA	Cytochrome P450 monooxygenase protein
Position: -156 Score: 4.6 Sequence: TGTCGGGAAGCTTACA Locus tag: RHE_PD00224 Name: fixB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: RHE_PD00225 Name: fixA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: RHE_PD00226 Name: fixC Funciton: Electron-transferring-flavoprotein dehydrogenase Locus tag: RHE_PD00227 Name: fixX Funciton: Ferredoxin-like protein, FixX
	RHE_PD00224	fixB	Electron transfer flavoprotein, beta subunit
	RHE_PD00225	fixA	Electron transfer flavoprotein, alpha subunit
	RHE_PD00226	fixC	Electron-transferring-flavoprotein dehydrogenase
	RHE_PD00227	fixX	Ferredoxin-like protein, FixX
Position: -195 Score: 5 Sequence: TGTCTGATCGGCGACA Position: -138 Score: 4 Sequence: TTTCTGAAACCCAACA Locus tag: RHE_PD00202 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: RHE_PD00201 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: RHE_PD00200 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: RHE_PD00199 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: RHE_PD00198 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: RHE_PD00197 Name: nifX Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
	RHE_PD00202	nifH	Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
	RHE_PD00201	nifD	Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
	RHE_PD00200	nifK	Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
	RHE_PD00199	nifE	Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
	RHE_PD00198	nifN	Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
	RHE_PD00197	nifX	Nitrogenase FeMo-cofactor carrier protein NifX
Position: -195 Score: 5 Sequence: TGTCTGATCGGCGACA Position: -138 Score: 4 Sequence: TTTCTGAAACCCAACA Locus tag: RHE_PD00308 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: RHE_PD00307 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: RHE_PD00306 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
	RHE_PD00308	nifH	Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
	RHE_PD00307	nifD	Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
	RHE_PD00306	nifK	Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
Position: -190 Score: 3.9 Sequence: TGGCGGTTTCGAGACA Locus tag: RHE_PD00260 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
	RHE_PD00260	nifH	Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Position: -176 Score: 3.7 Sequence: TGTCCGTTTGGCGATA Locus tag: RHE_PD00259 Name: nifQ Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
	RHE_PD00259	nifQ	Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
Position: -139 Score: 4.8 Sequence: TGTCGGAAGCTTGACA Locus tag: RHE_PD00229 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: RHE_PD00230 Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated
	RHE_PD00229	nifB	Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
	RHE_PD00230	fdxN	4Fe-4S ferredoxin, nitrogenase-associated

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NifA in Rhizobium etli CFN 42

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --