Regulog HrcA - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Phylum: | Proteobacteria/alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - HrcA
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Genome | Genes | Operons |
|---|---|---|
| Sinorhizobium meliloti 1021 | 4 | 2 |
| Rhizobium sp. NGR234 | 6 | 3 |
| Rhizobium leguminosarum bv. viciae 3841 | 6 | 3 |
| Rhizobium etli CFN 42 | 8 | 4 |
| Agrobacterium tumefaciens str. C58 (Cereon) | 2 | 1 |
| Mesorhizobium sp. BNC1 | 4 | 2 |
| Mesorhizobium loti MAFF303099 | 10 | 5 |
| Brucella melitensis 16M | 2 | 1 |
| Bartonella quintana str. Toulouse | 2 | 1 |
| Rhodopseudomonas palustris CGA009 | 4 | 2 |
| Bradyrhizobium japonicum USDA 110 | 7 | 4 |
| Bradyrhizobium sp. BTAi1 | 6 | 3 |
| Nitrobacter winogradskyi Nb-255 | 6 | 3 |
| Azorhizobium caulinodans ORS 571 | 4 | 2 |
| Xanthobacter autotrophicus Py2 | 4 | 2 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| groS |
*3
Sinorhizobium meliloti 1021 Site: position = -85 score = 6.72147 sequence = CTAGCACTCGCTTGATATGAGTGCTAA Gene: SMc00912: Heat shock protein 60 family co-chaperone GroES Site: position = -83 score = 6.857 sequence = CTAGCACTCTCGCGTGAAGAGTGCTAA Gene: SMa0745: Heat shock protein 60 family co-chaperone GroES Gene: SMa0125: Heat shock protein 60 family co-chaperone GroES |
*3
Rhizobium sp. NGR234 Site: position = -178 score = 6.77949 sequence = GTAGCACTCTCAAGTGGCGAGTGCTAA Gene: NGR_b05810: Heat shock protein 60 family co-chaperone GroES Site: position = -175 score = 6.7568 sequence = TTAGCACTCCATGTGATGGAGTGCTAA Gene: NGR_b05110: Heat shock protein 60 family co-chaperone GroES Site: position = -85 score = 6.77934 sequence = CTAGCACTCTTTAAGAAGGAGTGCTAA Gene: NGR_c04090: Heat shock protein 60 family co-chaperone GroES |
*3
Rhizobium leguminosarum bv. viciae 3841 Site: position = -85 score = 6.85052 sequence = CTAGCACTCACCGCAAGGGAGTGCTAA Gene: RL0884: Heat shock protein 60 family co-chaperone GroES Site: position = -81 score = 6.11241 sequence = TTGGCACTCCTATCAATCGAGTGCCAC Gene: RL1410: Heat shock protein 60 family co-chaperone GroES Site: position = -172 score = 6.77535 sequence = CTAGCACTCGCGGGCAGGGAGTGCCAA Gene: pRL120643: Heat shock protein 60 family co-chaperone GroES |
*4
Rhizobium etli CFN 42 Site: position = -81 score = 6.11241 sequence = TTGGCACTCCTATCAATCGAGTGCCAC Gene: RHE_CH01270: Heat shock protein 60 family co-chaperone GroES Site: position = -85 score = 6.85052 sequence = CTAGCACTCACCGCAAGGGAGTGCTAA Gene: RHE_CH00829: Heat shock protein 60 family co-chaperone GroES Site: position = -177 score = 5.97736 sequence = TTAGCAGCCACTTCGAGTGAGTGCTAA Gene: RHE_CH01238: Heat shock protein 60 family co-chaperone GroES Site: position = -169 score = 6.76276 sequence = TTAGCAGTCGTCGATAGAGAGTGCTAA Gene: RHE_PF00329: Heat shock protein 60 family co-chaperone GroES |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -85 score = 6.63924 sequence = CTGGCACTCCAACAAGGGGAGTGCTAA Gene: Atu0683: Heat shock protein 60 family co-chaperone GroES |
*2
Mesorhizobium sp. BNC1 Site: position = -167 score = 6.85575 sequence = TTGGCACTCTCAATAGGTGAGTGCTAA Gene: Meso_3096: Heat shock protein 60 family co-chaperone GroES Site: position = -94 score = 7.1918 sequence = TTAGCACTCTCCTACAGCGAGTGCTAA Gene: Meso_0358: Heat shock protein 60 family co-chaperone GroES |
*5
Mesorhizobium loti MAFF303099 Site: position = -183 score = 6.69188 sequence = CTAGCACTCTCGCACGCCGAGTGCCAA Gene: mlr2393: Heat shock protein 60 family co-chaperone GroES Site: position = -80 score = 6.49134 sequence = TTGGCACTCCTATCTATCGAGTGCCAA Gene: mll2233: Heat shock protein 60 family co-chaperone GroES Site: position = -79 score = 7.21416 sequence = TTAGCACTCCCCAATAGCGAGTGCTAA Gene: msl5812: Heat shock protein 60 family co-chaperone GroES Site: position = -81 score = 7.08675 sequence = TTAGCACTCGCCTCTGCCGAGTGCTAA Gene: msr9341: Heat shock protein 60 family co-chaperone GroES Site: position = -91 score = 7.19899 sequence = TTAGCACTCGCCCTTGGTGAGTGCTAA Gene: mll8202: Heat shock protein 60 family co-chaperone GroES |
*
Brucella melitensis 16M Site: position = -87 score = 6.72963 sequence = TTAGCACTCGGACGAATAGAGTGCTAA Gene: BMEII1047: Heat shock protein 60 family co-chaperone GroES |
*
Bartonella quintana str. Toulouse Site: position = -76 score = 6.93709 sequence = TTAGCACTCTCCAACTATGAGTGCTAA Gene: BQ10760: Heat shock protein 60 family co-chaperone GroES |
*2
Rhodopseudomonas palustris CGA009 Site: position = -69 score = 6.21939 sequence = CTGGCACTCTTCGCCCGCGACTGCCAA Gene: RPA2165: Heat shock protein 60 family co-chaperone GroES Site: position = -109 score = 6.46992 sequence = TTAGCACTCTTGCAGTACGACTGCCAA Gene: RPA1141: Heat shock protein 60 family co-chaperone GroES |
*5
Bradyrhizobium japonicum USDA 110 Site: position = -119 score = 6.46121 sequence = TTAGCACTCGGAAAGCCCGATTGCTAA Gene: bsr7532: Heat shock protein 60 family co-chaperone GroES Gene: bll2060: Heat shock protein 60 family co-chaperone GroES Site: position = -70 score = 6.38321 sequence = CTAGCACTCGCGGGCACAGACTGCTAA Gene: blr5625: Heat shock protein 60 family co-chaperone GroES Site: position = -59 score = 5.5269 sequence = TCAGCACTCGCTAGCTTCGACTGCTAT Gene: blr6978: Heat shock protein 60 family co-chaperone GroES Site: position = -137 score = 5.37113 sequence = TTGGCAGTCAGACGGCCGGAGTGACAA Gene: blr5226: Heat shock protein 60 family co-chaperone GroES |
*4
Bradyrhizobium sp. BTAi1 Site: position = -71 score = 6.39607 sequence = CTGGCACTCGCCGGCAGCGACTGCCAA Gene: BBta_5284: Heat shock protein 60 family co-chaperone GroES Site: position = -126 score = 6.52922 sequence = TTAGCACTCGGAGGGCACGATTGCTAA Gene: BBta_1672: Heat shock protein 60 family co-chaperone GroES Gene: BBta_2520: Heat shock protein 60 family co-chaperone GroES Site: position = -143 score = 6.09089 sequence = CTGGCAATCGTTCCCACCGAGTGCCAA Gene: BBta_3033: Heat shock protein 60 family co-chaperone GroES |
*3
Nitrobacter winogradskyi Nb-255 Site: position = -70 score = 5.83103 sequence = CTGGCACTCGCTGGTATTGACTGCCAG Gene: Nwi_2191: Heat shock protein 60 family co-chaperone GroES Site: position = -117 score = 5.99113 sequence = GTGGCACTCTCGCAATACGATTGCCAA Gene: Nwi_2573: Heat shock protein 60 family co-chaperone GroES Site: position = -144 score = 5.84128 sequence = TTGGCGCTCCAGGGCGCGGAGTGCCAA Gene: Nwi_2114: Heat shock protein 60 family co-chaperone GroES |
*2
Azorhizobium caulinodans ORS 571 Site: position = -184 score = 6.65429 sequence = TTGGCACTCATGGGAGAGGAGTGCTAA Gene: AZC_2311: Heat shock protein 60 family co-chaperone GroES Site: position = -71 score = 6.507 sequence = TTGGCACTCCCATCCGGTGAGTGCCAG Gene: AZC_0425: Heat shock protein 60 family co-chaperone GroES |
*2
Xanthobacter autotrophicus Py2 Site: position = -138 score = 6.83215 sequence = CTAGCACTCCACATCCGCGAGTGCTAA Gene: Xaut_4265: Heat shock protein 60 family co-chaperone GroES Site: position = -71 score = 6.55975 sequence = TTGGCACTCCACCTTGGAGAGTGCCAG Gene: Xaut_1165: Heat shock protein 60 family co-chaperone GroES |
Heat shock protein 60 family co-chaperone GroES |
| groL |
3
Sinorhizobium meliloti 1021 Gene: SMa0744: Heat shock protein 60 family chaperone GroEL Gene: SMc00913: Heat shock protein 60 family chaperone GroEL Gene: SMa0124: Heat shock protein 60 family chaperone GroEL |
3
Rhizobium sp. NGR234 Gene: NGR_b05820: Heat shock protein 60 family chaperone GroEL Gene: NGR_b05100: Heat shock protein 60 family chaperone GroEL Gene: NGR_c04080: Heat shock protein 60 family chaperone GroEL |
3
Rhizobium leguminosarum bv. viciae 3841 Gene: RL1412: Heat shock protein 60 family chaperone GroEL Gene: RL0883: Heat shock protein 60 family chaperone GroEL Gene: pRL120642: Heat shock protein 60 family chaperone GroEL |
4
Rhizobium etli CFN 42 Gene: RHE_CH01271: Heat shock protein 60 family chaperone GroEL Gene: RHE_CH00828: Heat shock protein 60 family chaperone GroEL Gene: RHE_CH01239: Heat shock protein 60 family chaperone GroEL Gene: RHE_PF00330: Heat shock protein 60 family chaperone GroEL |
Gene: Atu0682: Heat shock protein 60 family chaperone GroEL |
2
Mesorhizobium sp. BNC1 Gene: Meso_3095: Heat shock protein 60 family chaperone GroEL Gene: Meso_0357: Heat shock protein 60 family chaperone GroEL |
5
Mesorhizobium loti MAFF303099 Gene: mlr2394: Heat shock protein 60 family chaperone GroEL Gene: mll2232: Heat shock protein 60 family chaperone GroEL Gene: mll5810: Heat shock protein 60 family chaperone GroEL Gene: mlr9342: Heat shock protein 60 family chaperone GroEL Gene: mll8201: Heat shock protein 60 family chaperone GroEL |
Gene: BMEII1048: Heat shock protein 60 family chaperone GroEL |
Gene: BQ10750: Heat shock protein 60 family chaperone GroEL |
2
Rhodopseudomonas palustris CGA009 Gene: RPA2164: Heat shock protein 60 family chaperone GroEL Gene: RPA1140: Heat shock protein 60 family chaperone GroEL |
5
Bradyrhizobium japonicum USDA 110 Gene: blr6979: Heat shock protein 60 family chaperone GroEL Gene: bll2059: Heat shock protein 60 family chaperone GroEL Gene: blr5626: Heat shock protein 60 family chaperone GroEL Gene: blr7533: Heat shock protein 60 family chaperone GroEL Gene: blr5227: Heat shock protein 60 family chaperone GroEL |
4
Bradyrhizobium sp. BTAi1 Gene: BBta_5285: Heat shock protein 60 family chaperone GroEL Gene: BBta_1671: Heat shock protein 60 family chaperone GroEL Gene: BBta_2521: Heat shock protein 60 family chaperone GroEL Gene: BBta_3034: Heat shock protein 60 family chaperone GroEL |
3
Nitrobacter winogradskyi Nb-255 Gene: Nwi_2574: Heat shock protein 60 family chaperone GroEL Gene: Nwi_2192: Heat shock protein 60 family chaperone GroEL Gene: Nwi_2113: Heat shock protein 60 family chaperone GroEL |
2
Azorhizobium caulinodans ORS 571 Gene: AZC_2312: Heat shock protein 60 family chaperone GroEL Gene: AZC_0424: Heat shock protein 60 family chaperone GroEL |
2
Xanthobacter autotrophicus Py2 Gene: Xaut_4264: Heat shock protein 60 family chaperone GroEL Gene: Xaut_1166: Heat shock protein 60 family chaperone GroEL |
Heat shock protein 60 family chaperone GroEL |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |