Regulog NagC - Vibrionales
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | repressor (activator) |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine-6-phosphate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NagC
- By taxonomy - Vibrionales
- By TF family - ROK
- By effector - N-acetylglucosamine-6-phosphate
- By pathway - N-acetylglucosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Vibrio cholerae O1 biovar eltor str. N16961 | 27 | 20 |
| Vibrio vulnificus CMCP6 | 30 | 21 |
| Vibrio harveyi ATCC BAA-1116 | 24 | 17 |
| Vibrio parahaemolyticus RIMD 2210633 | 27 | 19 |
| Vibrio shilonii AK1 | 18 | 14 |
| Vibrio splendidus LGP32 | 23 | 18 |
| Vibrio fischeri ES114 | 25 | 20 |
| Vibrio salmonicida LFI1238 | 20 | 14 |
| Vibrio angustum S14 | 17 | 11 |
| Photobacterium profundum SS9 | 25 | 17 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| adh |
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*
Vibrio harveyi ATCC BAA-1116 Site: position = -266 score = 5.16425 sequence = CTTTTTTTGTTTAATAAAAAATG Gene: VIBHAR_03018: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
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*
Vibrio splendidus LGP32 Site: position = -131 score = 5.09219 sequence = TTTTTTTCACACTGTGAAATAAT Gene: VS_0958: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
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Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
| CRON 2. | |||||||||||
| pyrG |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -131 score = 5.09569 sequence = TTTGATTTGAAGCAAAAAATAAA Gene: VC2448: CTP synthase (EC 6.3.4.2) |
*
Vibrio vulnificus CMCP6 Site: position = -132 score = 5.09569 sequence = TTTGATTTGAAGCAAAAAATAAA Gene: VV1_1578: CTP synthase (EC 6.3.4.2) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -132 score = 5.09569 sequence = TTTGATTTGAAGCAAAAAATAAA Gene: VIBHAR_03526: CTP synthase (EC 6.3.4.2) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -132 score = 5.09569 sequence = TTTGATTTGAAGCAAAAAATAAA Gene: VP2562: CTP synthase (EC 6.3.4.2) |
*
Vibrio shilonii AK1 Site: position = -133 score = 4.95855 sequence = ATTGATTTGAAGCAAAAAATAAA Gene: VSAK1_08019: CTP synthase (EC 6.3.4.2) |
*
Vibrio splendidus LGP32 Site: position = -132 score = 4.95855 sequence = ATTGATTTGAAGCAAAAAATAAA Gene: VS_2609: CTP synthase (EC 6.3.4.2) |
*
Vibrio fischeri ES114 Site: position = -136 score = 4.62952 sequence = ATTGATTTGGAGCAAAAAATAAA Gene: VF_2076: CTP synthase (EC 6.3.4.2) |
*
Vibrio salmonicida LFI1238 Site: position = -135 score = 4.62952 sequence = ATTGATTTGGAGCAAAAAATAAA Gene: VSAL_I2515: CTP synthase (EC 6.3.4.2) |
*
Vibrio angustum S14 Site: position = -128 score = 4.72127 sequence = CTTGATTTGAAGCAAAAAAAATC Gene: VAS14_20436: CTP synthase (EC 6.3.4.2) |
*
Photobacterium profundum SS9 Site: position = -129 score = 4.76169 sequence = ATTGATTTGAGACAAAAAAAAAC Gene: PBPRA3080: CTP synthase (EC 6.3.4.2) |
CTP synthase (EC 6.3.4.2) |
| eno |
Gene: VC2447: Enolase (EC 4.2.1.11) |
Gene: VV1_1579: Enolase (EC 4.2.1.11) |
2
Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_06630: Enolase (EC 4.2.1.11) Gene: VIBHAR_03525: Enolase (EC 4.2.1.11) |
Gene: VP2561: Enolase (EC 4.2.1.11) |
Gene: VSAK1_09903: Enolase (EC 4.2.1.11) |
Gene: VS_2607: Enolase (EC 4.2.1.11) |
Gene: VF_2075: Enolase (EC 4.2.1.11) |
Gene: VSAL_I2514: Enolase (EC 4.2.1.11) |
Gene: VAS14_20441: Enolase (EC 4.2.1.11) |
Gene: PBPRA3079: Enolase (EC 4.2.1.11) |
Enolase (EC 4.2.1.11) |
| CRON 3. | |||||||||||
| ptsG |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -248 score = 5.07442 sequence = GTAATTTTGTTACTAAAAATAAC Site: position = -214 score = 4.56655 sequence = TTTTATTTACCCAGTAAAATTAA Gene: VC2013: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) |
*
Vibrio vulnificus CMCP6 Site: position = -320 score = 5.07442 sequence = GTAATTTTGTTACTAAAAATAAC Gene: VV1_2999: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -321 score = 5.07442 sequence = GTAATTTTGTTACTAAAAATAAC Site: position = -287 score = 4.9783 sequence = TTTTATTTACGCCTTAAAATTAA Gene: VIBHAR_02900: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -321 score = 5.07442 sequence = GTAATTTTGTTACTAAAAATAAC Site: position = -287 score = 4.9783 sequence = TTTTATTTACGCCTTAAAATTAA Gene: VP2046: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) |
*
Vibrio shilonii AK1 Site: position = -286 score = 4.74948 sequence = TTTTATTCACTGCGTAAAATTAA Gene: VSAK1_26880: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) |
*
Vibrio splendidus LGP32 Site: position = -321 score = 5.07442 sequence = GTAATTTTGTTACTAAAAATAAC Site: position = -287 score = 5.02615 sequence = TTTTATTTACTCAGTAAAATAAT Gene: VS_1032: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) |
*
Vibrio fischeri ES114 Site: position = -318 score = 4.98216 sequence = CTATTTTTGTTGCTAAAAATAAC Gene: VF_1732: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) |
Gene: VSAL_I2252: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) |
|
*2
Photobacterium profundum SS9 Site: position = -335 score = 4.31812 sequence = GTATCTTCGTTACGTAAAATAAC Gene: PBPRA1203: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) Gene: PBPRA1760: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) |
PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) |
| CRON 4. | |||||||||||
| chi1 |
|
Gene: VV1_2342: Chitinase (EC 3.2.1.14) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -107 score = 5.46238 sequence = GTTATTTTTATTTATAAATTAAG Gene: VIBHAR_05607: Chitinase (EC 3.2.1.14) |
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Chitinase (EC 3.2.1.14) |
| CRON 5. | |||||||||||
| gltA |
Gene: VC2092: Citrate synthase (si) (EC 2.3.3.1) |
Gene: VV1_0162: Citrate synthase (si) (EC 2.3.3.1) |
Gene: VIBHAR_01350: Citrate synthase (si) (EC 2.3.3.1) |
Gene: VP0842: Citrate synthase (si) (EC 2.3.3.1) |
Gene: VSAK1_08923: Citrate synthase (si) (EC 2.3.3.1) |
Gene: VS_2249: Citrate synthase (si) (EC 2.3.3.1) |
*
Vibrio fischeri ES114 Site: position = -132 score = 5.24284 sequence = CTTTTTTTTCATTAAAAATATAA Gene: VF_0818: Citrate synthase (si) (EC 2.3.3.1) |
*
Vibrio salmonicida LFI1238 Site: position = -132 score = 5.17577 sequence = CTTTTTTTTCATCAAAAATATAA Gene: VSAL_I0841: Citrate synthase (si) (EC 2.3.3.1) |
Gene: VAS14_17726: Citrate synthase (si) (EC 2.3.3.1) |
Gene: PBPRA1043: Citrate synthase (si) (EC 2.3.3.1) |
Citrate synthase (si) (EC 2.3.3.1) |
| CRON 6. | |||||||||||
| grcA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -215 score = 5.33999 sequence = TATTTTTTATTATTTAAAATAAA Gene: VC2361: autonomous glycyl radical cofactor GrcA |
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*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -216 score = 5.11009 sequence = TATTTTTTATATTATCAAATAAA Gene: VP0497: autonomous glycyl radical cofactor GrcA |
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*
Photobacterium profundum SS9 Site: position = -204 score = 4.72438 sequence = TATTTTTTAAACTTTAAACTAAC Gene: PBPRA0556: autonomous glycyl radical cofactor GrcA |
autonomous glycyl radical cofactor GrcA |
| CRON 7. | |||||||||||
| mcp2 |
|
*
Vibrio vulnificus CMCP6 Site: position = -120 score = 4.75664 sequence = TTTATTTTTAGCTTCGAATTTAT Gene: VV20402: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
Gene: VIBHAR_04784: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -185 score = 5.23844 sequence = TTTATTTTGAGCAGTAAAATATA Gene: VPA1651: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
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*
Vibrio splendidus LGP32 Site: position = -29 score = 5.62171 sequence = TTTATTTTAAAGCGTAAAATAAA Gene: VS_1728: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
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Gene: VSAL_II1022: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
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*
Photobacterium profundum SS9 Site: position = -134 score = 4.57421 sequence = TTTTATTTCACTCAAAAATTAAC Gene: PBPRB0407: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
| CRON 8. | |||||||||||
| epd |
Gene: VC0476: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) |
Gene: VV1_1539: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) |
Gene: VIBHAR_03566: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) |
Gene: VP2601: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) |
|
*
Vibrio splendidus LGP32 Site: position = -103 score = 4.41626 sequence = GTTTATTTGTATCTAAAGTTATG Gene: VS_2648: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) |
Gene: VF_0441: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) |
Gene: VSAL_I0555: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) |
Gene: VAS14_20231: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) |
*
Photobacterium profundum SS9 Site: position = -232 score = 5.24351 sequence = TTTAATTTGCAGTGTGAAAAAAA Gene: PBPRA3132: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) |
D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) |
| pgk |
Gene: VC0477: Phosphoglycerate kinase (EC 2.7.2.3) |
*
Vibrio vulnificus CMCP6 Site: position = -126 score = 5.31839 sequence = TTTATTTTTAGCCTTGAAATAAA Gene: VV1_1540: Phosphoglycerate kinase (EC 2.7.2.3) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -128 score = 5.29467 sequence = TTTATTTTAAGCCTTGAAATAAA Gene: VIBHAR_03565: Phosphoglycerate kinase (EC 2.7.2.3) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -128 score = 5.09628 sequence = TTTATTTCAAGCCTTGAAATAAA Gene: VP2600: Phosphoglycerate kinase (EC 2.7.2.3) |
*
Vibrio shilonii AK1 Site: position = -126 score = 4.54815 sequence = TTAATTTTGATGCTTGAAATTAA Gene: VSAK1_14330: Phosphoglycerate kinase (EC 2.7.2.3) |
*
Vibrio splendidus LGP32 Site: position = -126 score = 5.56621 sequence = TTTATTTTTTATCTTGAAATAAA Gene: VS_2646: Phosphoglycerate kinase (EC 2.7.2.3) |
*
Vibrio fischeri ES114 Site: position = -154 score = 4.33926 sequence = GTAAATTTGTGATGAAAAGATAA Site: position = -126 score = 4.49467 sequence = ATGAATTTTTATCTTGAAAAAAG Gene: VF_0442: Phosphoglycerate kinase (EC 2.7.2.3) |
*
Vibrio salmonicida LFI1238 Site: position = -126 score = 5.06747 sequence = ATTAATTTTCACCTTGAAAAAAG Gene: VSAL_I0556: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: VAS14_20236: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: PBPRA3131: Phosphoglycerate kinase (EC 2.7.2.3) |
Phosphoglycerate kinase (EC 2.7.2.3) |
| fbaA |
Gene: VC0478: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: VV1_1541: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: VIBHAR_03564: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: VP2599: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: VSAK1_14335: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: VS_2645: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: VF_0443: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: VSAL_I0557: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: VAS14_20241: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: PBPRA3130: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
| CRON 9. | |||||||||||
| ptsH |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -207 score = 5.54426 sequence = TTTATTTTTAGCTTCAAAATAAA Gene: VC0966: Phosphocarrier protein of PTS system |
*
Vibrio vulnificus CMCP6 Site: position = -204 score = 5.54426 sequence = TTTATTTTTAGCTTCAAAATAAA Gene: VV1_0210: Phosphocarrier protein of PTS system |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -207 score = 5.54426 sequence = TTTATTTTTAGGTTCAAAATAAA Gene: VIBHAR_01308: Phosphocarrier protein of PTS system |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -208 score = 5.34587 sequence = TTTATTTCTAGCTTCAAAATAAA Gene: VP0795: Phosphocarrier protein of PTS system |
*
Vibrio shilonii AK1 Site: position = -207 score = 5.61104 sequence = TTTATTTTAAGCCAAAAAATAAA Gene: VSAK1_11440: Phosphocarrier protein of PTS system |
*
Vibrio splendidus LGP32 Site: position = -212 score = 5.60586 sequence = TTTATTTTTCGCTTCAAAATAAA Gene: VS_2290: Phosphocarrier protein of PTS system |
*
Vibrio fischeri ES114 Site: position = -218 score = 5.50829 sequence = TTTATTTTTAGGTGTAAAATAAT Gene: VF_1894: Phosphocarrier protein of PTS system |
*
Vibrio salmonicida LFI1238 Site: position = -217 score = 5.50829 sequence = TTTATTTTTAGGTGTAAAATAAT Gene: VSAL_I2357: Phosphocarrier protein of PTS system |
*
Vibrio angustum S14 Site: position = -205 score = 5.01684 sequence = TTTATTTTTAGCTCCGAAATAAA Gene: VAS14_16916: Phosphocarrier protein of PTS system |
*
Photobacterium profundum SS9 Site: position = -216 score = 5.16306 sequence = TTTATTTTAAGCATCGAAATAAA Gene: PBPRA0863: Phosphocarrier protein of PTS system |
Phosphocarrier protein of PTS system |
| ptsI |
Gene: VC0965: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: VV1_0211: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: VIBHAR_01307: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: VP0794: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: VSAK1_11445: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: VS_2291: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: VF_1895: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: VSAL_I2358: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: VAS14_16911: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: PBPRA0862: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
| crr |
Gene: VC0964: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: VV1_0212: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: VIBHAR_01306: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: VP0793: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: VSAK1_08748: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: VS_2292: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: VF_1897: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: VSAL_I2359: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: VAS14_16906: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
Gene: PBPRA0861: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
PTS system, glucose-specific IIA component (EC 2.7.1.69) |
| CRON 10. | |||||||||||
| chiA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -120 score = 4.76189 sequence = ATTTTTTTTCGCAAACAAAAAAG Gene: VCA0027: Chitinase (EC 3.2.1.14) |
*
Vibrio vulnificus CMCP6 Site: position = -122 score = 5.15256 sequence = AATTTTTTTTGCCGAAAAAAAAG Gene: VV21217: Chitinase (EC 3.2.1.14) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -266 score = 4.81419 sequence = TTTAATTTCACTTGCAAAATAAC Site: position = -112 score = 5.44111 sequence = TATTTTTTTTGAAAAAAAATAAG Gene: VIBHAR_06955: Chitinase (EC 3.2.1.14) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -140 score = 5.12057 sequence = AATTTTTTTTGACGAAAAAAAAC Gene: VPA0055: Chitinase (EC 3.2.1.14) |
*
Vibrio shilonii AK1 Site: position = -113 score = 4.96427 sequence = TTATTTTTTGAACACAAAATAAA Gene: VSAK1_11970: Chitinase (EC 3.2.1.14) |
*
Vibrio splendidus LGP32 Site: position = -121 score = 4.93152 sequence = TTTATTTTCAGTCATGAAATTAA Gene: VS_II1414: Chitinase (EC 3.2.1.14) |
*
Vibrio fischeri ES114 Site: position = -233 score = 4.62987 sequence = CTAAATTCAAAGCACAAATAAAC Site: position = -208 score = 4.58236 sequence = CTATTTTTATAAAGCAATAAAAA Gene: VF_1598: Chitinase (EC 3.2.1.14) |
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*
Vibrio angustum S14 Site: position = -97 score = 4.53076 sequence = CATGTTTCTACTTATAAAAAAAG Gene: VAS14_09224: Chitinase (EC 3.2.1.14) |
|
Chitinase (EC 3.2.1.14) |
| CRON 11. | |||||||||||
| chiP |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -197 score = 5.36129 sequence = TATTTTTTTAGATAAAAATTAAG Gene: VC0972: Outer membrane chitoporin |
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*
Vibrio splendidus LGP32 Site: position = -212 score = 5.32863 sequence = TATTTTTTTAGATGAAAATTAAG Gene: VS_2285: Outer membrane chitoporin |
*
Vibrio fischeri ES114 Site: position = -237 score = 5.22978 sequence = TATTTTTTTTATTGGAAATTAAG Gene: VF_1889: Outer membrane chitoporin |
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Outer membrane chitoporin |
| CRON 12. | |||||||||||
| alsR |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -30 score = 5.18822 sequence = TTTATTTTGATATAGAAAATATA Gene: VC1588: Transcriptional regulator of alpha-acetolactate operon alsR |
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Transcriptional regulator of alpha-acetolactate operon alsR |
| CRON 13. | |||||||||||
| nagE2 |
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Gene: VSAK1_21644: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Vibrio splendidus LGP32 Site: position = -129 score = 4.96356 sequence = GTTTGTTTGCATTAAGAAATAAG Gene: VS_2186: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*2
Vibrio fischeri ES114 Site: position = -159 score = 4.79824 sequence = GTTAATTTACGCCTCGAATTAAT Gene: VF_A0438: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Site: position = -128 score = 4.50529 sequence = TTTAATTTGCGGGGCGAAATTAA Gene: VF_0808: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*2
Vibrio salmonicida LFI1238 Site: position = -160 score = 5.04615 sequence = GTTAATTTACAGCGCAAATAAAC Gene: VSAL_II0721: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Site: position = -127 score = 4.50529 sequence = TTTAATTTGCGGGGCGAAATTAA Site: position = -86 score = 3.58601 sequence = TTAATAACGAGTAGCGAAATAAG Gene: VSAL_I0831: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Vibrio angustum S14 Site: position = -201 score = 5.02379 sequence = TTTTTTTCGAATGATAAAATAAG Site: position = -107 score = 4.50529 sequence = TTTAATTTGCGGGGCGAAATTAA Gene: VAS14_17651: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Photobacterium profundum SS9 Site: position = -202 score = 4.96757 sequence = TTTGTTTCGAATCATAAAATAAT Site: position = -108 score = 4.79458 sequence = TTTAATTTGCGGAGCGAAATTAA Gene: PBPRA1032: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
| hex |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -130 score = 5.00222 sequence = TTAATTTTGCGCTTAGAAAAAAG Gene: VC2217: Beta-hexosaminidase (EC 3.2.1.52) |
*
Vibrio vulnificus CMCP6 Site: position = -99 score = 4.92331 sequence = TTAATTTTACGCTTAGAAAAAAC Gene: VV1_0241: Beta-hexosaminidase (EC 3.2.1.52) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -123 score = 5.04757 sequence = TTAATTTTACGCTTAGAAATAAC Gene: VIBHAR_01265: Beta-hexosaminidase (EC 3.2.1.52) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -122 score = 5.35503 sequence = TTTATTTTACGCTTAGAAATAAC Gene: VP0755: Beta-hexosaminidase (EC 3.2.1.52) |
|
*
Vibrio splendidus LGP32 Site: position = -217 score = 4.32377 sequence = CTCAGTTTTTACGTCAAAATAAA Site: position = -97 score = 5.35608 sequence = TTTAATTCACGGCAAAAAATAAG Gene: VS_0765: Beta-hexosaminidase (EC 3.2.1.52) |
*
Vibrio fischeri ES114 Site: position = -123 score = 5.02542 sequence = AATAATTTATACCGCAAAATATA Site: position = -33 score = 3.97068 sequence = TGTAATTCCAGATTCGAAATTAA Gene: VF_A1010: Beta-hexosaminidase (EC 3.2.1.52) |
*
Vibrio salmonicida LFI1238 Site: position = -202 score = 4.12165 sequence = TTTTTTTTGATTGCCAAATTTAA Site: position = -137 score = 4.90658 sequence = TTTAATTTATACCGTGAATTATT Gene: VSAL_II0050: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: VAS14_17656: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: PBPRA1033: Beta-hexosaminidase (EC 3.2.1.52) |
Beta-hexosaminidase (EC 3.2.1.52) |
| nagE1 |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -200 score = 5.61265 sequence = GTTTTTTTACATCATAAAATAAG Site: position = -106 score = 4.99297 sequence = TTTAATTTGCGGAGCAAAATTAA Gene: VC0995: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Vibrio vulnificus CMCP6 Site: position = -145 score = 4.99297 sequence = TTTAATTTGCGGAGCAAAATTAA Gene: VV1_0179: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -105 score = 4.99297 sequence = TTTAATTTGCGGAGCAAAATTAA Site: position = -199 score = 5.46859 sequence = ATTTTTTTGTATAATAAAATAAG Gene: VIBHAR_01336: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -199 score = 5.46859 sequence = ATTTTTTTGTATAATAAAATAAG Site: position = -105 score = 4.99297 sequence = TTTAATTTGCGGAGCAAAATTAA Gene: VP0831: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Vibrio shilonii AK1 Site: position = -110 score = 4.99297 sequence = TTTAATTTGCGGAGCAAAATTAA Site: position = -68 score = 3.51896 sequence = CTAAATTGAACGGCTAAAATAAG Gene: VSAK1_10638: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Vibrio splendidus LGP32 Site: position = -73 score = 4.70367 sequence = TTTAATTTGCGGGGCAAAATTAA Gene: VS_2260: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
|
|
2
Vibrio angustum S14 Gene: VAS14_02456: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Gene: VAS14_11539: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: PBPRB0263: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
| CRON 14. | |||||||||||
| chi |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -58 score = 5.09457 sequence = CTTATTTTTCACTATTAAATTAG Gene: VC0769: Chitinase (EC 3.2.1.14) |
*
Vibrio vulnificus CMCP6 Site: position = -33 score = 4.56569 sequence = CATTTTTTGTGTAGAGAAAAAGG Gene: VV1_0417: Chitinase (EC 3.2.1.14) |
Gene: VIBHAR_01081: Chitinase (EC 3.2.1.14) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -149 score = 4.27399 sequence = CATTTTTCTTGTGACAAAATGTG Gene: VP0619: Chitinase (EC 3.2.1.14) |
Gene: VSAK1_12865: Chitinase (EC 3.2.1.14) |
Gene: VS_0630: Chitinase (EC 3.2.1.14) |
*
Vibrio fischeri ES114 Site: position = -39 score = 4.44967 sequence = CTTAATTTCGTTTTTAAATTATC Gene: VF_1390: Chitinase (EC 3.2.1.14) |
|
*
Vibrio angustum S14 Site: position = -316 score = 4.20881 sequence = CTTTTTTATAAAAGAGAATCATG Gene: VAS14_15829: Chitinase (EC 3.2.1.14) |
Gene: PBPRA2181: Chitinase (EC 3.2.1.14) |
Chitinase (EC 3.2.1.14) |
| CRON 15. | |||||||||||
| VP1029 |
|
|
|
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -269 score = 5.34739 sequence = CTTTTTTTTATTAAAAAAATAAC Gene: VP1029: Hypothetical protein |
|
|
|
|
|
|
Hypothetical protein |
| tfoX |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -223 score = 4.85985 sequence = ATTAATTTTTATCAGGAAAAATG Gene: VC1722: DNA transformation protein TfoX |
*
Vibrio vulnificus CMCP6 Site: position = -261 score = 4.36297 sequence = CACATTTTTTATTTGAAAATGTG Gene: VV1_2136: DNA transformation protein TfoX |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -238 score = 4.22768 sequence = GTTAATTCAATATACGAAGTATC Gene: VIBHAR_01580: DNA transformation protein TfoX |
Gene: VP1028: DNA transformation protein TfoX |
Gene: VSAK1_04062: DNA transformation protein TfoX |
*
Vibrio splendidus LGP32 Site: position = -340 score = 4.37284 sequence = GTTTTTTTCCTCAACAAACAAAG Gene: VS_1087: DNA transformation protein TfoX |
*
Vibrio fischeri ES114 Site: position = -104 score = 4.9681 sequence = GTTAATTTTTACGTTAAAATAAC Gene: VF_1573: DNA transformation protein TfoX |
*
Vibrio salmonicida LFI1238 Site: position = -104 score = 5.24182 sequence = GTTAATTTTTACTTAGAAATAAC Gene: VSAL_I1982: DNA transformation protein TfoX |
*
Vibrio angustum S14 Site: position = -268 score = 4.33295 sequence = TTAAATTTAATATTAAAAGTATT Gene: VAS14_03998: DNA transformation protein TfoX |
*
Photobacterium profundum SS9 Site: position = -169 score = 4.72724 sequence = TATTATTTGTGTCTTAAATAATA Gene: PBPRA2110: DNA transformation protein TfoX |
DNA transformation protein TfoX |
| CRON 16. | |||||||||||
| cbp |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -319 score = 5.12445 sequence = GTTATTTAACTCTAAAAAATAAG Gene: VCA0811: Chitin binding protein |
Gene: VV20044: Chitin binding protein |
Gene: VIBHAR_04739: Chitin binding protein |
Gene: VPA1598: Chitin binding protein |
*
Vibrio shilonii AK1 Site: position = -118 score = 4.41328 sequence = CTTATTTTTCCACTCTAAATTAC Gene: VSAK1_17082: Chitin binding protein |
|
*
Vibrio fischeri ES114 Site: position = -210 score = 4.85346 sequence = TTTATTTCTTTATTTACAATAAG Gene: VF_A0143: Chitin binding protein |
Gene: VSAL_II0134: Chitin binding protein |
|
*
Photobacterium profundum SS9 Site: position = -30 score = 4.6999 sequence = GTTGTTTTTTTCTATAAAACAAC Gene: PBPRB0312: Chitin binding protein |
Chitin binding protein |
| CRON 17. | |||||||||||
| mcp |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -144 score = 4.92099 sequence = TTTATTTCGAGGCAAAAATTTAA Site: position = -102 score = 4.74463 sequence = CTTACTTCGTATCAATAAATAAG Gene: VC0449: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
*2
Vibrio vulnificus CMCP6 Site: position = -148 score = 4.9677 sequence = CTTTTTTCACGCTATAAATTTAA Gene: VV1_1511: N-acetylglucosamine regulated methyl-accepting chemotaxis protein Gene: VV1_1510: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
|
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -148 score = 5.11569 sequence = CTTATTTCACGCTAAAAATTTAA Gene: VP2629: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
|
*
Vibrio splendidus LGP32 Site: position = -128 score = 5.08455 sequence = CTTTTTTTTCTTCGTAAATTTAA Gene: VS_2703: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
*
Vibrio fischeri ES114 Site: position = -273 score = 4.2759 sequence = TTTTATTTAAGATTTAATTCAAA Gene: VF_2161: N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
|
|
|
N-acetylglucosamine regulated methyl-accepting chemotaxis protein |
| CRON 18. | |||||||||||
| tfoX1 |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -135 score = 4.68398 sequence = CTTATTTCTCTTCGTAAACTATC Gene: VC1153: DNA transformation protein TfoX1 (Sxy) |
*
Vibrio vulnificus CMCP6 Site: position = -150 score = 4.63891 sequence = CTTATTTTTTTTCATTAAGTATG Gene: VV1_2820: DNA transformation protein TfoX1 (Sxy) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -152 score = 4.73267 sequence = CTTATTTTTCAACGTTAAGTATG Gene: VIBHAR_02628: DNA transformation protein TfoX1 (Sxy) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -151 score = 4.73267 sequence = CTTATTTTTCAACGTTAAGTATG Gene: VP1241: DNA transformation protein TfoX1 (Sxy) |
*
Vibrio shilonii AK1 Site: position = -155 score = 4.80171 sequence = CTTATTTTGCATTGTGAACTATT Gene: VSAK1_06295: DNA transformation protein TfoX1 (Sxy) |
*
Vibrio splendidus LGP32 Site: position = -155 score = 4.68025 sequence = CTTATTTTTCTTTTCGAAGTATC Gene: VS_1829: DNA transformation protein TfoX1 (Sxy) |
*
Vibrio fischeri ES114 Site: position = -136 score = 4.58618 sequence = CTTGTTTCGTTACATGAATTAAT Gene: VF_0896: DNA transformation protein TfoX1 (Sxy) |
|
*
Vibrio angustum S14 Site: position = -179 score = 5.42427 sequence = ATTATTTTGCGACAAAAAATATG Gene: VAS14_05168: DNA transformation protein TfoX1 (Sxy) |
*
Photobacterium profundum SS9 Site: position = -163 score = 4.80936 sequence = CTTATTTCGCGTTAAATAATATG Gene: PBPRA1207: DNA transformation protein TfoX1 (Sxy) |
DNA transformation protein TfoX1 (Sxy) |
| CRON 19. | |||||||||||
| VF_2510 |
|
|
|
|
|
|
*
Vibrio fischeri ES114 Site: position = -128 score = 4.7274 sequence = TATATTTTTCAATAAAATAAATT Gene: VF_2510: Putative BglB-family transcriptional antiterminator |
*
Vibrio salmonicida LFI1238 Site: position = -80 score = 5.4062 sequence = CTTATTTTTAGTCGAAAAAAATA Gene: VSAL_I0103: Putative BglB-family transcriptional antiterminator |
|
|
Putative BglB-family transcriptional antiterminator |
| CRON 20. | |||||||||||
| gapB |
Gene: VCA0843: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
Gene: VV20764: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
Gene: VIBHAR_05341: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
Gene: VPA1230: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
*
Vibrio shilonii AK1 Site: position = -267 score = 4.51319 sequence = CTTGATTGAATGCGAAAAATAAG Gene: VSAK1_05950: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
*
Vibrio splendidus LGP32 Site: position = -316 score = 4.89002 sequence = AGTATTTTTTGGCGAAAATTAAG Gene: VS_II0346: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
|
|
Gene: VAS14_13644: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
*
Photobacterium profundum SS9 Site: position = -250 score = 5.34386 sequence = CTTATATTTCATCAAAAAATAAG Gene: PBPRA1724: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
| CRON 21. | |||||||||||
| glgC |
Gene: VC1727: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: VV1_2131: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -197 score = 4.84094 sequence = GTTATTTAGCGCCAAAAATAAAG Gene: VIBHAR_01575: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -192 score = 5.28835 sequence = TTTATTTAGCGTCAAAAAATAAG Gene: VP1023: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
*
Vibrio shilonii AK1 Site: position = -231 score = 4.67672 sequence = CTTATTTCAAAACGATAATTTAG Gene: VSAK1_04037: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: VS_1082: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: VF_A0806: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Gene: VSAL_II0238: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
Gene: PBPRB0405: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
| glgA |
Gene: VC1726: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: VV1_2132: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: VIBHAR_01576: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: VP1024: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: VSAK1_04042: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: VS_1083: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: VF_A0805: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Gene: VSAL_II0239: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|
Gene: PBPRB0406: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
| CRON 22. | |||||||||||
| glmU |
Gene: VC2762: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
*
Vibrio vulnificus CMCP6 Site: position = -101 score = 4.79748 sequence = CTTAATTTTTATTAGAAATTTTT Gene: VV1_1023: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -97 score = 4.90604 sequence = ATTAATTTTAGTTGTAAATTTAC Gene: VIBHAR_00419: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -97 score = 4.81422 sequence = ATTATTTTTAGTTGGAAATTTAC Gene: VP3067: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
*2
Vibrio shilonii AK1 Site: position = -88 score = 5.02719 sequence = CTTAATTTTTATTAGAAATTTAC Gene: VSAK1_24585: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Gene: VSAK1_15437: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
Gene: VS_3150: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
Gene: VF_2562: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
Gene: VSAL_I3057: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
*
Vibrio angustum S14 Site: position = -201 score = 4.47836 sequence = CTTTTTTTATGGCTAAAATCTTA Site: position = -105 score = 5.19706 sequence = GTTATTTCTTAGTGAGAATTAAA Gene: VAS14_22517: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
2
Photobacterium profundum SS9 Gene: PBPRA3601: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Gene: PBPRA1987: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
| CRON 23. | |||||||||||
| aldC |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -98 score = 5.18822 sequence = TATATTTTCTATATCAAAATAAA Gene: VC1589: Alpha-acetolactate decarboxylase (EC 4.1.1.5) |
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|
|
Gene: VAS14_04523: Alpha-acetolactate decarboxylase (EC 4.1.1.5) |
|
Alpha-acetolactate decarboxylase (EC 4.1.1.5) |
| budB |
Gene: VC1590: Acetolactate synthase, catabolic (EC 2.2.1.6) |
|
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|
|
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|
|
|
|
Acetolactate synthase, catabolic (EC 2.2.1.6) |
| VC1591 |
Gene: VC1591: Oxidoreductase, short-chain dehydrogenase/reductase family |
|
|
|
|
|
|
|
|
|
Oxidoreductase, short-chain dehydrogenase/reductase family |
| CRON 24. | |||||||||||
| VF_1011 |
|
|
|
|
|
|
Gene: VF_1011: Outer membrane protein |
*
Vibrio salmonicida LFI1238 Site: position = -283 score = 5.11648 sequence = CTTTTTTTTATATGTAAATTTAG Gene: VSAL_I1132: Outer membrane protein |
|
|
Outer membrane protein |
| CRON 25. | |||||||||||
| ompC |
|
Gene: VV21143: Predicted OmpC-like chitoporin |
|
Gene: VPA1745: Predicted OmpC-like chitoporin |
|
|
*
Vibrio fischeri ES114 Site: position = -283 score = 4.79722 sequence = GTTATTTTGTGATGTAAACCAAG Site: position = -143 score = 4.7766 sequence = TTAATTTTGTGAAGCGAATTAAT Gene: VF_1795: Predicted OmpC-like chitoporin |
*
Vibrio salmonicida LFI1238 Site: position = -342 score = 5.02804 sequence = CCTTTTTTGTTATAAAAATTAAG Site: position = -145 score = 4.7245 sequence = TTAATTTTGCAGAGCGAATTAAT Gene: VSAL_I2182: Predicted OmpC-like chitoporin |
|
*
Photobacterium profundum SS9 Site: position = -338 score = 4.88021 sequence = CATAATTCGCGATAAAAAAATAG Site: position = -293 score = 5.10879 sequence = ATTATTTCACGGCGTGAAATAAG Gene: PBPRA2790: Predicted OmpC-like chitoporin |
Predicted OmpC-like chitoporin |
| CRON 26. | |||||||||||
| chiD |
*2
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -357 score = 5.16667 sequence = TTTTATTTATGATCAAAAATAAA Gene: VC1073: Chitodextrinase precursor (EC 3.2.1.14) Site: position = -227 score = 5.14985 sequence = CTTTTTTTATGGTGAAAAATTTA Site: position = -42 score = 4.50677 sequence = TTTATTTAATGGTTGAAATAATA Gene: VCA0700: Chitodextrinase precursor (EC 3.2.1.14) |
*
Vibrio vulnificus CMCP6 Site: position = -172 score = 4.62987 sequence = ATTAGTTATCGGTACAAAATAAG Site: position = -58 score = 5.08249 sequence = GTTATTTTACAGCGAAATATAAG Gene: VV20213: Chitodextrinase precursor (EC 3.2.1.14) |
|
|
|
|
|
|
|
|
Chitodextrinase precursor (EC 3.2.1.14) |
| CRON 27. | |||||||||||
| VV21298 |
|
*
Vibrio vulnificus CMCP6 Site: position = -71 score = 5.09748 sequence = CTTTTTTTAAAACAAAAAGAAAG Gene: VV21298: hypothetical protein |
|
|
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hypothetical protein |
| VV21300 |
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Gene: VV21300: Beta-glucanase precursor (EC 3.2.1.73) |
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Beta-glucanase precursor (EC 3.2.1.73) |
| CRON 28. | |||||||||||
| VV20680 |
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*
Vibrio vulnificus CMCP6 Site: position = -290 score = 5.1033 sequence = TTTATTTTAAAAATAGAAATATC Gene: VV20680: Permease of the major facilitator superfamily |
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Permease of the major facilitator superfamily |
| VV20681 |
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Gene: VV20681: Hypothetical protein |
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Hypothetical protein |
| CRON 29. | |||||||||||
| ompU |
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*
Vibrio shilonii AK1 Site: position = -195 score = 5.0931 sequence = CCTATTTTTAAATATAAATTAAT Gene: VSAK1_16967: Outer membrane protein OmpU |
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Gene: VAS14_08970: Outer membrane protein OmpU |
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Outer membrane protein OmpU |
| CRON 30. | |||||||||||
| chiS |
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Vibrio vulnificus CMCP6 Site: position = -149 score = 4.5569 sequence = CTTACTTGTCAAAGTAAAAAAAC Gene: VV1_1674: Chitin catabolic cascade sensor histidine kinase ChiS |
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Vibrio fischeri ES114 Site: position = -131 score = 5.02594 sequence = CTTGATTTTTAACATGAATTAAG Gene: VF_2138: Chitin catabolic cascade sensor histidine kinase ChiS |
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Chitin catabolic cascade sensor histidine kinase ChiS |
| CRON 31. | |||||||||||
| nagB |
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Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -109 score = 5.61976 sequence = CTTATTTTATAATGCAAATTAAC Gene: VCA1025: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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Vibrio vulnificus CMCP6 Site: position = -64 score = 5.71927 sequence = CTTATTTTATAATGCAAAATAAT Gene: VV21200: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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Vibrio harveyi ATCC BAA-1116 Site: position = -63 score = 5.57464 sequence = CTTATTTTATAATGCAAATTAAT Gene: VIBHAR_07002: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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Vibrio parahaemolyticus RIMD 2210633 Site: position = -231 score = 4.63407 sequence = CTTAATTCAAGCCATAAATTTTA Site: position = -63 score = 5.37625 sequence = CTTATTTTATAATGCGAATTAAT Gene: VPA0038: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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Vibrio shilonii AK1 Site: position = -62 score = 5.37625 sequence = CTTATTTTATAATGCGAATTAAT Gene: VSAK1_20854: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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Vibrio splendidus LGP32 Site: position = -64 score = 5.37625 sequence = CTTATTTTATAATGCGAATTAAT Gene: VS_II1435: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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Vibrio fischeri ES114 Site: position = -65 score = 5.37625 sequence = CTTATTTTATAATGCGAATTAAT Gene: VF_2357: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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Vibrio salmonicida LFI1238 Site: position = -64 score = 5.3887 sequence = CTTATTTTACAATGCGAATTAAC Gene: VSAL_I2812: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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Vibrio angustum S14 Site: position = -172 score = 4.50529 sequence = TTAATTTCGCCCCGCAAATTAAA Site: position = -78 score = 5.02379 sequence = CTTATTTTATCATTCGAAAAAAA Gene: VAS14_17646: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
*2
Photobacterium profundum SS9 Site: position = -171 score = 4.79458 sequence = TTAATTTCGCTCCGCAAATTAAA Site: position = -77 score = 4.96757 sequence = ATTATTTTATGATTCGAAACAAA Gene: PBPRA1031: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Site: position = -60 score = 5.46002 sequence = CTTATTTTACAATGAAAATAATG Gene: PBPRB0360: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
| nagA |
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Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -291 score = 5.61265 sequence = CTTATTTTATGATGTAAAAAAAC Gene: VC0994: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Vibrio vulnificus CMCP6 Site: position = -317 score = 5.08503 sequence = CTTATTTTATCATTCAAAAAAAT Gene: VV1_0180: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Vibrio harveyi ATCC BAA-1116 Site: position = -313 score = 5.46859 sequence = CTTATTTTATTATACAAAAAAAT Gene: VIBHAR_01335: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Vibrio parahaemolyticus RIMD 2210633 Site: position = -313 score = 5.46859 sequence = CTTATTTTATTATACAAAAAAAT Gene: VP0829: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Vibrio shilonii AK1 Site: position = -291 score = 4.98091 sequence = CTTATTTTATCATACGAAAAAAT Gene: VSAK1_10643: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Vibrio splendidus LGP32 Site: position = -295 score = 5.08503 sequence = CTTATTTTATCATTCAAAAAAAT Gene: VS_2261: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
*2
Vibrio fischeri ES114 Gene: VF_0665: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Site: position = -40 score = 4.70095 sequence = TTTTTTTCGTACTCTAAATTATA Gene: VF_0807: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Vibrio salmonicida LFI1238 Site: position = -297 score = 4.50529 sequence = TTAATTTCGCCCCGCAAATTAAA Site: position = -41 score = 4.82674 sequence = TTTTTTTTGTATACTAAATTATA Gene: VSAL_I0830: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
*2
Vibrio angustum S14 Site: position = -149 score = 5.41141 sequence = CTTAATTCACATAGAAAAATAAG Gene: VAS14_11739: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Gene: VAS14_17641: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
*2
Photobacterium profundum SS9 Site: position = -131 score = 5.29965 sequence = CTTATTTTCTATCGAGAATTAAG Gene: PBPRB0765: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Gene: PBPRA1030: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
| nagC |
Gene: VC0993: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
Gene: VV1_0181: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
Gene: VIBHAR_01334: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
Gene: VP0828: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
Gene: VSAK1_10648: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
Gene: VS_2262: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
Gene: VF_0806: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
Gene: VSAL_I0829: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
Gene: VAS14_17636: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
Gene: PBPRA1029: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family |
| CRON 32. | |||||||||||
| gapA |
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Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -39 score = 4.67288 sequence = GTTATCTTTAATCAGAAATTAAG Gene: VC2000: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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Vibrio vulnificus CMCP6 Site: position = -39 score = 4.67288 sequence = GTTATCTTTAATCAGAAATTAAG Gene: VV1_3140: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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Vibrio harveyi ATCC BAA-1116 Site: position = -39 score = 4.67288 sequence = GTTATCTTTAATCAGAAATTAAG Gene: VIBHAR_03049: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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Vibrio parahaemolyticus RIMD 2210633 Site: position = -39 score = 4.67288 sequence = GTTATCTTTAATCAGAAATTAAG Gene: VP2157: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: VSAK1_10028: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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Gene: VF_0913: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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Vibrio salmonicida LFI1238 Site: position = -124 score = 4.67957 sequence = GTTATTTTTTGATTTTAAACAAT Gene: VSAL_I1849: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
| aldE |
Gene: VC2001: Aldose 1-epimerase |
Gene: VV1_3141: Aldose 1-epimerase |
Gene: VIBHAR_03050: Aldose 1-epimerase |
Gene: VP2158: Aldose 1-epimerase |
Gene: VSAK1_10033: Aldose 1-epimerase |
Gene: VS_0931: Aldose 1-epimerase |
Gene: VF_0912: Aldose 1-epimerase |
Gene: VSAL_I1848: Aldose 1-epimerase |
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Vibrio angustum S14 Site: position = -104 score = 5.39528 sequence = GATATTTTAAAGCGAAAAATAAG Gene: VAS14_06018: Aldose 1-epimerase |
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Photobacterium profundum SS9 Site: position = -108 score = 5.5055 sequence = GATATTTTTAAACGAAAAATAAG Gene: PBPRA2603: Aldose 1-epimerase |
Aldose 1-epimerase |
| CRON 33. | |||||||||||
| ybfM |
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*2
Vibrio vulnificus CMCP6 Gene: VV21097: N-acetylglucosamine-regulated outer membrane porin Site: position = -211 score = 5.34684 sequence = TATTTTTTTAGAAAAAAAATAAG Gene: VV1_0205: N-acetylglucosamine-regulated outer membrane porin |
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Vibrio harveyi ATCC BAA-1116 Site: position = -212 score = 5.34684 sequence = TATTTTTTTAGAAAAAAAATAAG Gene: VIBHAR_01313: N-acetylglucosamine-regulated outer membrane porin |
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Vibrio parahaemolyticus RIMD 2210633 Site: position = -209 score = 5.34684 sequence = TATTTTTTTAGAAAAAAAATAAG Gene: VP0802: N-acetylglucosamine-regulated outer membrane porin |
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Gene: VAS14_16941: N-acetylglucosamine-regulated outer membrane porin |
*2
Photobacterium profundum SS9 Site: position = -105 score = 4.89735 sequence = TATTTTTCGAAGAATAAATTAAG Gene: PBPRA0868: N-acetylglucosamine-regulated outer membrane porin Gene: PBPRA0872: N-acetylglucosamine-regulated outer membrane porin |
N-acetylglucosamine-regulated outer membrane porin |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |