Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NagC in Vibrio shilonii AK1

Properties
Regulator type: Transcription factor
TF locus tag: VSAK1_10648
Regulator family: ROK
Regulation mode: repressor (activator)
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine-6-phosphate
Regulog: NagC - Vibrionales
Statistics of regulated genes:
- Genes 18
- Operons 14
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 199 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -155
Score: 4.8
Sequence: CTTATTTTGCATTGTGAACTATT
Locus tag: VSAK1_06295
Name: tfoX1
Funciton: DNA transformation protein TfoX1 (Sxy)
VSAK1_06295
tfoX1
DNA transformation protein TfoX1 (Sxy)
Position: -88
Score: 5
Sequence: CTTAATTTTTATTAGAAATTTAC
Locus tag: VSAK1_24585
Name: glmU
Funciton: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
VSAK1_24585
glmU
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
Position: -231
Score: 4.7
Sequence: CTTATTTCAAAACGATAATTTAG
Locus tag: VSAK1_04037
Name: glgC
Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: VSAK1_04042
Name: glgA
Funciton: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
VSAK1_04037
glgC
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
VSAK1_04042
glgA
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Position: -267
Score: 4.5
Sequence: CTTGATTGAATGCGAAAAATAAG
Locus tag: VSAK1_05950
Name: gapB
Funciton: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
VSAK1_05950
gapB
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -195
Score: 5.1
Sequence: CCTATTTTTAAATATAAATTAAT
Locus tag: VSAK1_16967
Name: ompU
Funciton: Outer membrane protein OmpU
VSAK1_16967
ompU
Outer membrane protein OmpU
Position: -286
Score: 4.7
Sequence: TTTTATTCACTGCGTAAAATTAA
Locus tag: VSAK1_26880
Name: ptsG
Funciton: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
VSAK1_26880
ptsG
PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
Position: -133
Score: 5
Sequence: ATTGATTTGAAGCAAAAAATAAA
Locus tag: VSAK1_08019
Name: pyrG
Funciton: CTP synthase (EC 6.3.4.2)
VSAK1_08019
pyrG
CTP synthase (EC 6.3.4.2)
Position: -110
Score: 5
Sequence: TTTAATTTGCGGAGCAAAATTAA
Position: -68
Score: 3.5
Sequence: CTAAATTGAACGGCTAAAATAAG
Locus tag: VSAK1_10638
Name: nagE1
Funciton: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
VSAK1_10638
nagE1
PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Position: -62
Score: 5.4
Sequence: CTTATTTTATAATGCGAATTAAT
Locus tag: VSAK1_20854
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
VSAK1_20854
nagB
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Position: -118
Score: 4.4
Sequence: CTTATTTTTCCACTCTAAATTAC
Locus tag: VSAK1_17082
Name: cbp
Funciton: Chitin binding protein
VSAK1_17082
cbp
Chitin binding protein
Position: -207
Score: 5.6
Sequence: TTTATTTTAAGCCAAAAAATAAA
Locus tag: VSAK1_11440
Name: ptsH
Funciton: Phosphocarrier protein of PTS system
Locus tag: VSAK1_11445
Name: ptsI
Funciton: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
VSAK1_11440
ptsH
Phosphocarrier protein of PTS system
VSAK1_11445
ptsI
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Position: -113
Score: 5
Sequence: TTATTTTTTGAACACAAAATAAA
Locus tag: VSAK1_11970
Name: chiA
Funciton: Chitinase (EC 3.2.1.14)
VSAK1_11970
chiA
Chitinase (EC 3.2.1.14)
Position: -126
Score: 4.5
Sequence: TTAATTTTGATGCTTGAAATTAA
Locus tag: VSAK1_14330
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: VSAK1_14335
Name: fbaA
Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
VSAK1_14330
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
VSAK1_14335
fbaA
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Position: -291
Score: 5
Sequence: CTTATTTTATCATACGAAAAAAT
Locus tag: VSAK1_10643
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: VSAK1_10648
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
VSAK1_10643
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
VSAK1_10648
nagC
N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
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