Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NagC in Vibrio splendidus LGP32

Properties
Regulator type: Transcription factor
TF locus tag: VS_2262
Regulator family: ROK
Regulation mode: repressor (activator)
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine-6-phosphate
Regulog: NagC - Vibrionales
Statistics of regulated genes:
- Genes 23
- Operons 18
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 199 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -155
Score: 4.7
Sequence: CTTATTTTTCTTTTCGAAGTATC
Locus tag: VS_1829
Name: tfoX1
Funciton: DNA transformation protein TfoX1 (Sxy)
VS_1829
tfoX1
DNA transformation protein TfoX1 (Sxy)
Position: -316
Score: 4.9
Sequence: AGTATTTTTTGGCGAAAATTAAG
Locus tag: VS_II0346
Name: gapB
Funciton: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
VS_II0346
gapB
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -131
Score: 5.1
Sequence: TTTTTTTCACACTGTGAAATAAT
Locus tag: VS_0958
Name: adh
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
VS_0958
adh
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -129
Score: 5
Sequence: GTTTGTTTGCATTAAGAAATAAG
Locus tag: VS_2186
Name: nagE2
Funciton: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
VS_2186
nagE2
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Position: -73
Score: 4.7
Sequence: TTTAATTTGCGGGGCAAAATTAA
Locus tag: VS_2260
Name: nagE1
Funciton: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
VS_2260
nagE1
PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Position: -217
Score: 4.3
Sequence: CTCAGTTTTTACGTCAAAATAAA
Position: -97
Score: 5.4
Sequence: TTTAATTCACGGCAAAAAATAAG
Locus tag: VS_0765
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
VS_0765
hex
Beta-hexosaminidase (EC 3.2.1.52)
Position: -321
Score: 5.1
Sequence: GTAATTTTGTTACTAAAAATAAC
Position: -287
Score: 5
Sequence: TTTTATTTACTCAGTAAAATAAT
Locus tag: VS_1032
Name: ptsG
Funciton: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
VS_1032
ptsG
PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
Position: -132
Score: 5
Sequence: ATTGATTTGAAGCAAAAAATAAA
Locus tag: VS_2609
Name: pyrG
Funciton: CTP synthase (EC 6.3.4.2)
Locus tag: VS_2607
Name: eno
Funciton: Enolase (EC 4.2.1.11)
VS_2609
pyrG
CTP synthase (EC 6.3.4.2)
VS_2607
eno
Enolase (EC 4.2.1.11)
Position: -29
Score: 5.6
Sequence: TTTATTTTAAAGCGTAAAATAAA
Locus tag: VS_1728
Name: mcp2
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
VS_1728
mcp2
N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Position: -128
Score: 5.1
Sequence: CTTTTTTTTCTTCGTAAATTTAA
Locus tag: VS_2703
Name: mcp
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
VS_2703
mcp
N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Position: -340
Score: 4.4
Sequence: GTTTTTTTCCTCAACAAACAAAG
Locus tag: VS_1087
Name: tfoX
Funciton: DNA transformation protein TfoX
VS_1087
tfoX
DNA transformation protein TfoX
Position: -212
Score: 5.6
Sequence: TTTATTTTTCGCTTCAAAATAAA
Locus tag: VS_2290
Name: ptsH
Funciton: Phosphocarrier protein of PTS system
Locus tag: VS_2291
Name: ptsI
Funciton: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Locus tag: VS_2292
Name: crr
Funciton: PTS system, glucose-specific IIA component (EC 2.7.1.69)
VS_2290
ptsH
Phosphocarrier protein of PTS system
VS_2291
ptsI
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
VS_2292
crr
PTS system, glucose-specific IIA component (EC 2.7.1.69)
Position: -212
Score: 5.3
Sequence: TATTTTTTTAGATGAAAATTAAG
Locus tag: VS_2285
Name: chiP
Funciton: Outer membrane chitoporin
VS_2285
chiP
Outer membrane chitoporin
Position: -121
Score: 4.9
Sequence: TTTATTTTCAGTCATGAAATTAA
Locus tag: VS_II1414
Name: chiA
Funciton: Chitinase (EC 3.2.1.14)
VS_II1414
chiA
Chitinase (EC 3.2.1.14)
Position: -126
Score: 5.6
Sequence: TTTATTTTTTATCTTGAAATAAA
Locus tag: VS_2646
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: VS_2645
Name: fbaA
Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
VS_2646
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
VS_2645
fbaA
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Position: -103
Score: 4.4
Sequence: GTTTATTTGTATCTAAAGTTATG
Locus tag: VS_2648
Name: epd
Funciton: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72)
VS_2648
epd
D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72)
Position: -64
Score: 5.4
Sequence: CTTATTTTATAATGCGAATTAAT
Locus tag: VS_II1435
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
VS_II1435
nagB
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Position: -295
Score: 5.1
Sequence: CTTATTTTATCATTCAAAAAAAT
Locus tag: VS_2261
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: VS_2262
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
VS_2261
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
VS_2262
nagC
N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise