Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NagC in Vibrio vulnificus CMCP6

Properties
Regulator type: Transcription factor
TF locus tag: VV1_0181
Regulator family: ROK
Regulation mode: repressor (activator)
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine-6-phosphate
Regulog: NagC - Vibrionales
Statistics of regulated genes:
- Genes 30
- Operons 21
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 199 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -150
Score: 4.6
Sequence: CTTATTTTTTTTCATTAAGTATG
Locus tag: VV1_2820
Name: tfoX1
Funciton: DNA transformation protein TfoX1 (Sxy)
VV1_2820
tfoX1
DNA transformation protein TfoX1 (Sxy)
Position: -39
Score: 4.7
Sequence: GTTATCTTTAATCAGAAATTAAG
Locus tag: VV1_3140
Name: gapA
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: VV1_3141
Name: aldE
Funciton: Aldose 1-epimerase
VV1_3140
gapA
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
VV1_3141
aldE
Aldose 1-epimerase
Position: -211
Score: 5.3
Sequence: TATTTTTTTAGAAAAAAAATAAG
Locus tag: VV1_0205
Name: ybfM
Funciton: N-acetylglucosamine-regulated outer membrane porin
VV1_0205
ybfM
N-acetylglucosamine-regulated outer membrane porin
Position: -101
Score: 4.8
Sequence: CTTAATTTTTATTAGAAATTTTT
Locus tag: VV1_1023
Name: glmU
Funciton: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
VV1_1023
glmU
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
Position: -290
Score: 5.1
Sequence: TTTATTTTAAAAATAGAAATATC
Locus tag: VV20680
Name: null
Funciton: Permease of the major facilitator superfamily
Locus tag: VV20681
Name: null
Funciton: Hypothetical protein
VV20680
Permease of the major facilitator superfamily
VV20681
Hypothetical protein
Position: -71
Score: 5.1
Sequence: CTTTTTTTAAAACAAAAAGAAAG
Locus tag: VV21298
Name: null
Funciton: hypothetical protein
Locus tag: VV21300
Name: null
Funciton: Beta-glucanase precursor (EC 3.2.1.73)
VV21298
hypothetical protein
VV21300
Beta-glucanase precursor (EC 3.2.1.73)
Position: -172
Score: 4.6
Sequence: ATTAGTTATCGGTACAAAATAAG
Position: -58
Score: 5.1
Sequence: GTTATTTTACAGCGAAATATAAG
Locus tag: VV20213
Name: chiD
Funciton: Chitodextrinase precursor (EC 3.2.1.14)
VV20213
chiD
Chitodextrinase precursor (EC 3.2.1.14)
Position: -149
Score: 4.6
Sequence: CTTACTTGTCAAAGTAAAAAAAC
Locus tag: VV1_1674
Name: chiS
Funciton: Chitin catabolic cascade sensor histidine kinase ChiS
VV1_1674
chiS
Chitin catabolic cascade sensor histidine kinase ChiS
Position: -320
Score: 5.1
Sequence: GTAATTTTGTTACTAAAAATAAC
Locus tag: VV1_2999
Name: ptsG
Funciton: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
VV1_2999
ptsG
PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
Position: -132
Score: 5.1
Sequence: TTTGATTTGAAGCAAAAAATAAA
Locus tag: VV1_1578
Name: pyrG
Funciton: CTP synthase (EC 6.3.4.2)
Locus tag: VV1_1579
Name: eno
Funciton: Enolase (EC 4.2.1.11)
VV1_1578
pyrG
CTP synthase (EC 6.3.4.2)
VV1_1579
eno
Enolase (EC 4.2.1.11)
Position: -120
Score: 4.8
Sequence: TTTATTTTTAGCTTCGAATTTAT
Locus tag: VV20402
Name: mcp2
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
VV20402
mcp2
N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Position: -148
Score: 5
Sequence: CTTTTTTCACGCTATAAATTTAA
Locus tag: VV1_1511
Name: mcp
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Locus tag: VV1_1510
Name: mcp
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
VV1_1511
mcp
N-acetylglucosamine regulated methyl-accepting chemotaxis protein
VV1_1510
mcp
N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Position: -261
Score: 4.4
Sequence: CACATTTTTTATTTGAAAATGTG
Locus tag: VV1_2136
Name: tfoX
Funciton: DNA transformation protein TfoX
VV1_2136
tfoX
DNA transformation protein TfoX
Position: -33
Score: 4.6
Sequence: CATTTTTTGTGTAGAGAAAAAGG
Locus tag: VV1_0417
Name: chi
Funciton: Chitinase (EC 3.2.1.14)
VV1_0417
chi
Chitinase (EC 3.2.1.14)
Position: -204
Score: 5.5
Sequence: TTTATTTTTAGCTTCAAAATAAA
Locus tag: VV1_0210
Name: ptsH
Funciton: Phosphocarrier protein of PTS system
Locus tag: VV1_0211
Name: ptsI
Funciton: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Locus tag: VV1_0212
Name: crr
Funciton: PTS system, glucose-specific IIA component (EC 2.7.1.69)
VV1_0210
ptsH
Phosphocarrier protein of PTS system
VV1_0211
ptsI
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
VV1_0212
crr
PTS system, glucose-specific IIA component (EC 2.7.1.69)
Position: -64
Score: 5.7
Sequence: CTTATTTTATAATGCAAAATAAT
Locus tag: VV21200
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
VV21200
nagB
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Position: -122
Score: 5.2
Sequence: AATTTTTTTTGCCGAAAAAAAAG
Locus tag: VV21217
Name: chiA
Funciton: Chitinase (EC 3.2.1.14)
VV21217
chiA
Chitinase (EC 3.2.1.14)
Position: -126
Score: 5.3
Sequence: TTTATTTTTAGCCTTGAAATAAA
Locus tag: VV1_1540
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: VV1_1541
Name: fbaA
Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
VV1_1540
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
VV1_1541
fbaA
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Position: -145
Score: 5
Sequence: TTTAATTTGCGGAGCAAAATTAA
Locus tag: VV1_0179
Name: nagE1
Funciton: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
VV1_0179
nagE1
PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Position: -99
Score: 4.9
Sequence: TTAATTTTACGCTTAGAAAAAAC
Locus tag: VV1_0241
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
VV1_0241
hex
Beta-hexosaminidase (EC 3.2.1.52)
Position: -317
Score: 5.1
Sequence: CTTATTTTATCATTCAAAAAAAT
Locus tag: VV1_0180
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: VV1_0181
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
VV1_0180
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
VV1_0181
nagC
N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
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