Regulog DosR - Actinomycetales
| Regulator type: | Transcription factor |
| Regulator family: | LuxR |
| Regulation mode: | activator |
| Biological process: | Dormancy |
| Effector: | Oxygen; Carbon monoxide; Nitric oxide |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By TF family - LuxR
- By effector - Oxygen
- By effector - Carbon monoxide
- By effector - Nitric oxide
- By pathway - Dormancy
| Genome | Genes | Operons |
|---|---|---|
| Mycobacterium abscessus ATCC 19977 | 8 | 5 |
| Mycobacterium avium 104 | 12 | 8 |
| Mycobacterium bovis AF2122/97 | 44 | 25 |
| Mycobacterium marinum M | 66 | 34 |
| Mycobacterium smegmatis str. MC2 155 | 33 | 16 |
| Mycobacterium sp. MCS | 49 | 26 |
| Mycobacterium tuberculosis H37Rv | 43 | 25 |
| Mycobacterium ulcerans Agy99 | 23 | 17 |
| Mycobacterium vanbaalenii PYR-1 | 54 | 25 |
| Nocardia farcinica IFM 10152 | 10 | 8 |
| Rhodococcus sp. RHA1 | 35 | 18 |
| Saccharopolyspora erythraea NRRL 2338 | 38 | 12 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| Rv2629 |
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Gene: MAV_0244: hypothetical protein, eRF1_3 family |
*
Mycobacterium bovis AF2122/97 Site: position = -300 score = 4.15 sequence = GGATGACTTTGGTCCCTA Gene: Mb2662: hypothetical protein, eRF1_3 family |
Gene: MMAR_2070: hypothetical protein, eRF1_3 family |
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Gene: Mmcs_2745: hypothetical protein, eRF1_3 family |
*
Mycobacterium tuberculosis H37Rv Site: position = -300 score = 4.15 sequence = GGATGACTTTGGTCCCTA Gene: Rv2629: hypothetical protein, eRF1_3 family |
Gene: MUL_3275: hypothetical protein, eRF1_3 family |
Gene: Mvan_1404: hypothetical protein, eRF1_3 family |
Gene: nfa27130: hypothetical protein, eRF1_3 family |
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Gene: SACE_4050: hypothetical protein, eRF1_3 family |
hypothetical protein, eRF1_3 family |
| Rv2630 |
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Gene: Mb2663: hypothetical protein, archease protein family |
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Gene: Rv2630: hypothetical protein, archease protein family |
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hypothetical protein, archease protein family |
| Rv2631 |
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Gene: Mb2664: hypothetical protein |
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Gene: Rv2631: hypothetical protein |
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hypothetical protein |
| fadD11_1 |
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Mycobacterium marinum M Site: position = -153 score = 4.07 sequence = GGATGACTTTGGGCCCTA Site: position = -219 score = 4.72 sequence = TAGGGTCTTACGTCCCGA Gene: MMAR_2071: long-chain-fatty-acid-CoA ligase, FadD11_1 |
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Mycobacterium ulcerans Agy99 Site: position = -153 score = 4.07 sequence = GGATGACTTTGGGCCCTA Site: position = -219 score = 4.72 sequence = TAGGGTCTTACGTCCCGA Gene: MUL_3274: long-chain-fatty-acid-CoA ligase, FadD11_1 |
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long-chain-fatty-acid-CoA ligase, FadD11_1 |
| MMAR_3392 |
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Mycobacterium marinum M Site: position = -102 score = 3.99 sequence = ATGGGCCTAAAGACCCGT Site: position = -125 score = 3.51 sequence = GTGGGACGAATGGCTCCC Gene: MMAR_3392: hypothetical protein |
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*
Mycobacterium sp. MCS Site: position = -74 score = 4.1 sequence = AGGAGCCTTAAGTCCCCT Site: position = -103 score = 4.16 sequence = TAGAGACGAAAGTCACCA Gene: Mmcs_1088: hypothetical protein |
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Mycobacterium vanbaalenii PYR-1 Site: position = -73 score = 3.93 sequence = TGGTGGCTTAGGTCCCTG Site: position = -101 score = 3.91 sequence = TAGAGACGAAAGTCACCC Gene: Mvan_1405: hypothetical protein |
Gene: nfa27990: hypothetical protein |
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hypothetical protein |
| CRON 2. | |||||||||||||
| Erg3_1 |
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Gene: MAV_2902: membrane-bound C-5 sterol desaturase Erg3_1 |
*
Mycobacterium bovis AF2122/97 Site: position = -155 score = 4.26 sequence = TAGGGCATAAAGTCTCTA Site: position = -122 score = 4.19 sequence = TAGGGAACAACGGCCTTC Gene: Mb1844: membrane-bound C-5 sterol desaturase Erg3_1 |
*3
Mycobacterium marinum M Site: position = -94 score = 4.55 sequence = CCGGGCCTTTTGGCCCTG Gene: MMAR_2691: membrane-bound C-5 sterol desaturase Erg3_1 Gene: MMAR_3832: membrane-bound C-5 sterol desaturase Erg3_1 Gene: MMAR_4630: membrane-bound C-5 sterol desaturase Erg3_1 |
2
Mycobacterium smegmatis str. MC2 155 Gene: MSMEG_3666: membrane-bound C-5 sterol desaturase Erg3_1 Gene: MSMEG_2812: membrane-bound C-5 sterol desaturase Erg3_1 |
Gene: Mmcs_2864: membrane-bound C-5 sterol desaturase Erg3_1 |
*
Mycobacterium tuberculosis H37Rv Site: position = -155 score = 4.26 sequence = TAGGGCATAAAGTCTCTA Site: position = -122 score = 4.19 sequence = TAGGGAACAACGGCCTTC Gene: Rv1814: membrane-bound C-5 sterol desaturase Erg3_1 |
*
Mycobacterium ulcerans Agy99 Site: position = -52 score = 4.55 sequence = CCGGGCCTTTTGGCCCTG Gene: MUL_3066: membrane-bound C-5 sterol desaturase Erg3_1 |
Gene: Mvan_3171: membrane-bound C-5 sterol desaturase Erg3_1 |
Gene: nfa16290: membrane-bound C-5 sterol desaturase Erg3_1 |
Gene: RHA1_ro04159: membrane-bound C-5 sterol desaturase Erg3_1 |
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membrane-bound C-5 sterol desaturase Erg3_1 |
| Rv1813c |
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*
Mycobacterium bovis AF2122/97 Site: position = -304 score = 4.19 sequence = GAAGGCCGTTGTTCCCTA Site: position = -271 score = 4.26 sequence = TAGAGACTTTATGCCCTA Gene: Mb1843c: hypothetical protein |
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Mycobacterium marinum M Site: position = -419 score = 4.83 sequence = TAGGGCCGATAGTCCCCG Site: position = -260 score = 4.07 sequence = CATTGACATTGGTCCCTA Gene: MMAR_1426: hypothetical protein |
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Mycobacterium tuberculosis H37Rv Site: position = -304 score = 4.19 sequence = GAAGGCCGTTGTTCCCTA Site: position = -271 score = 4.26 sequence = TAGAGACTTTATGCCCTA Gene: Rv1813c: hypothetical protein |
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Gene: nfa38660: hypothetical protein |
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hypothetical protein |
| CRON 3. | |||||||||||||
| narK2 |
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*
Mycobacterium bovis AF2122/97 Site: position = -171 score = 4.56 sequence = TAGGGCCTGAAGTCCCGG Site: position = -109 score = 4.64 sequence = TGGGGACTTCCGGCCCTA Gene: Mb1766c: nitrate/nitrite transporter protein |
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Gene: MSMEG_5141: nitrate/nitrite transporter protein |
Gene: Mmcs_1264: nitrate/nitrite transporter protein |
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Mycobacterium tuberculosis H37Rv Site: position = -171 score = 4.56 sequence = TAGGGCCTGAAGTCCCGG Site: position = -109 score = 4.64 sequence = TGGGGACTTCCGGCCCTA Gene: Rv1737c: nitrate/nitrite transporter protein |
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Gene: Mvan_4547: nitrate/nitrite transporter protein |
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nitrate/nitrite transporter protein |
| narX |
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Gene: Mb1765c: Probable nitrate reductase NarX |
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Gene: Rv1736c: Probable nitrate reductase NarX |
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Probable nitrate reductase NarX |
| CRON 4. | |||||||||||||
| Rv2628 |
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Gene: MAV_3503: hypothetical protein |
*
Mycobacterium bovis AF2122/97 Site: position = -275 score = 4.71 sequence = TAGGGACTTACGTCCCGC Site: position = -36 score = 4.16 sequence = AAGTGACGAAAGACCCCA Gene: Mb2661: hypothetical protein |
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Mycobacterium tuberculosis H37Rv Site: position = -275 score = 4.71 sequence = TAGGGACTTACGTCCCGC Site: position = -36 score = 4.16 sequence = AAGTGACGAAAGACCCCA Gene: Rv2628: hypothetical protein |
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*
Mycobacterium vanbaalenii PYR-1 Site: position = -124 score = 4.36 sequence = AAGGGCCGAAAGTCCCAC Gene: Mvan_1397: hypothetical protein |
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hypothetical protein |
| CRON 5. | |||||||||||||
| Rv0571c |
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Mycobacterium bovis AF2122/97 Site: position = -51 score = 4.19 sequence = CAGGGACCTAATTCCATA Gene: Mb0586c: hypothetical protein, , probably phosphoribosyltransferase |
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Mycobacterium marinum M Site: position = -54 score = 3.95 sequence = GCGTGACATTCGGCCCTG Gene: MMAR_2069: hypothetical protein, , probably phosphoribosyltransferase |
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Mycobacterium tuberculosis H37Rv Site: position = -51 score = 4.19 sequence = CAGGGACCTAATTCCATA Gene: Rv0571c: hypothetical protein, , probably phosphoribosyltransferase |
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Mycobacterium ulcerans Agy99 Site: position = -54 score = 3.95 sequence = GCGTGACATTCGGCCCTG Gene: MUL_3276: hypothetical protein, , probably phosphoribosyltransferase |
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hypothetical protein, , probably phosphoribosyltransferase |
| CRON 6. | |||||||||||||
| MAV_4728 |
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Rhodococcus sp. RHA1 Site: position = -96 score = 3.81 sequence = AGGGGCACGAAGTCCCGA Gene: RHA1_ro03145: hypothetical protein |
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hypothetical protein |
| ctpH_1 |
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*
Mycobacterium marinum M Site: position = -177 score = 3.99 sequence = TAGTGACGAAAGACCCGC Gene: MMAR_1228: metal cation transporting ATPase, P-type ATPase superfamily |
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Gene: Mvan_1651: metal cation transporting ATPase, P-type ATPase superfamily |
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Gene: RHA1_ro03146: metal cation transporting ATPase, P-type ATPase superfamily |
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metal cation transporting ATPase, P-type ATPase superfamily |
| CRON 7. | |||||||||||||
| Rv1738 |
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*
Mycobacterium bovis AF2122/97 Site: position = -195 score = 4.64 sequence = TAGGGCCGGAAGTCCCCA Site: position = -133 score = 4.56 sequence = CCGGGACTTCAGGCCCTA Gene: Mb1767: hypothetical protein |
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*
Mycobacterium tuberculosis H37Rv Site: position = -195 score = 4.64 sequence = TAGGGCCGGAAGTCCCCA Site: position = -133 score = 4.56 sequence = CCGGGACTTCAGGCCCTA Gene: Rv1738: hypothetical protein |
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hypothetical protein |
| CRON 8. | |||||||||||||
| Rv0078A |
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*
Mycobacterium bovis AF2122/97 Site: position = -332 score = 4.56 sequence = CAGGGCCGAAAGTCCCAT Gene: Mb0081c: hypothetical protein, nucleotidyl transferase of unknown function (DUF1814) |
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Mycobacterium tuberculosis H37Rv Site: position = -332 score = 4.56 sequence = CAGGGCCGAAAGTCCCAT Gene: Rv0078A: hypothetical protein, nucleotidyl transferase of unknown function (DUF1814) |
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hypothetical protein, nucleotidyl transferase of unknown function (DUF1814) |
| CRON 9. | |||||||||||||
| cydA |
Gene: MAB_2630: cytochrome bd ubiquinol oxidase subunit 1 |
Gene: MAV_3164: cytochrome bd ubiquinol oxidase subunit 1 |
Gene: Mb1649c: cytochrome bd ubiquinol oxidase subunit 1 |
Gene: MMAR_2426: cytochrome bd ubiquinol oxidase subunit 1 |
Gene: MSMEG_3233: cytochrome bd ubiquinol oxidase subunit 1 |
*
Mycobacterium sp. MCS Site: position = -85 score = 4.54 sequence = GAGTGACCAAAGTCCCTG Gene: Mmcs_3036: cytochrome bd ubiquinol oxidase subunit 1 |
Gene: Rv1623c: cytochrome bd ubiquinol oxidase subunit 1 |
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Gene: Mvan_2830: cytochrome bd ubiquinol oxidase subunit 1 |
Gene: nfa5850: cytochrome bd ubiquinol oxidase subunit 1 |
Gene: RHA1_ro04847: cytochrome bd ubiquinol oxidase subunit 1 |
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -97 score = 4.51 sequence = GCGGGACCTTGGTCCCGG Site: position = -74 score = 3.72 sequence = ACGGGACTCTCGGCCCGG Gene: SACE_0142: cytochrome bd ubiquinol oxidase subunit 1 |
cytochrome bd ubiquinol oxidase subunit 1 |
| cydB |
Gene: MAB_2631: cytochrome bd ubiquinol oxidase subunit II |
Gene: MAV_3165: cytochrome bd ubiquinol oxidase subunit II |
Gene: Mb1648c: cytochrome bd ubiquinol oxidase subunit II |
Gene: MMAR_2425: cytochrome bd ubiquinol oxidase subunit II |
Gene: MSMEG_3232: cytochrome bd ubiquinol oxidase subunit II |
Gene: Mmcs_3037: cytochrome bd ubiquinol oxidase subunit II |
Gene: Rv1622c: cytochrome bd ubiquinol oxidase subunit II |
Gene: MUL_1603: cytochrome bd ubiquinol oxidase subunit II |
Gene: Mvan_2829: cytochrome bd ubiquinol oxidase subunit II |
Gene: nfa5860: cytochrome bd ubiquinol oxidase subunit II |
Gene: RHA1_ro04848: cytochrome bd ubiquinol oxidase subunit II |
Gene: SACE_0143: cytochrome bd ubiquinol oxidase subunit II |
cytochrome bd ubiquinol oxidase subunit II |
| cydD |
Gene: MAB_2632: transport ATP-binding protein CydD |
Gene: MAV_3166: transport ATP-binding protein CydD |
Gene: Mb1647c: transport ATP-binding protein CydD |
Gene: MMAR_2424: transport ATP-binding protein CydD |
Gene: MSMEG_3231: transport ATP-binding protein CydD |
Gene: Mmcs_3038: transport ATP-binding protein CydD |
Gene: Rv1621c: transport ATP-binding protein CydD |
Gene: MUL_1602: transport ATP-binding protein CydD |
Gene: Mvan_2828: transport ATP-binding protein CydD |
Gene: nfa5870: transport ATP-binding protein CydD |
Gene: RHA1_ro04849: transport ATP-binding protein CydD |
Gene: SACE_0144: transport ATP-binding protein CydD |
transport ATP-binding protein CydD |
| cydC |
Gene: MAB_2633: transport ATP-binding protein CydC |
Gene: MAV_3167: transport ATP-binding protein CydC |
Gene: Mb1646c: transport ATP-binding protein CydC |
Gene: MMAR_2423: transport ATP-binding protein CydC |
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Gene: Mmcs_3039: transport ATP-binding protein CydC |
Gene: Rv1620c: transport ATP-binding protein CydC |
Gene: MUL_1601: transport ATP-binding protein CydC |
Gene: Mvan_2827: transport ATP-binding protein CydC |
Gene: nfa5880: transport ATP-binding protein CydC |
Gene: RHA1_ro04850: transport ATP-binding protein CydC |
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transport ATP-binding protein CydC |
| CRON 10. | |||||||||||||
| Rv0574c |
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*
Mycobacterium bovis AF2122/97 Site: position = -111 score = 4.53 sequence = TGAGGACCTTCGGCCCCA Gene: Mb0589c: polyglutamate synthase |
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Mycobacterium tuberculosis H37Rv Site: position = -111 score = 4.53 sequence = TGAGGACCTTCGGCCCCA Gene: Rv0574c: polyglutamate synthase |
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Gene: RHA1_ro00281: polyglutamate synthase |
Gene: SACE_3301: polyglutamate synthase |
polyglutamate synthase |
| Rv0573c |
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Gene: Mb0588c: nicotinic acid phosphoribosyltransferase |
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Gene: Rv0573c: nicotinic acid phosphoribosyltransferase |
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Gene: SACE_2423: nicotinic acid phosphoribosyltransferase |
nicotinic acid phosphoribosyltransferase |
| CRON 11. | |||||||||||||
| hspX |
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*
Mycobacterium bovis AF2122/97 Site: position = -81 score = 4.55 sequence = CGGGGACTTCTGTCCCTA Site: position = -138 score = 4.61 sequence = CAGGGTCAATGGTCCCCA Gene: Mb2057c: heat shock protein HspX_1 |
*
Mycobacterium marinum M Site: position = -87 score = 4.67 sequence = CGGGGACTTCCGTCCCTA Gene: MMAR_3484: heat shock protein HspX_1 |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -84 score = 4.61 sequence = ACGGGACTTCGGTCCCTA Site: position = -105 score = 3.94 sequence = CAGGGACGAAAGTTCGTG Site: position = -324 score = 3.96 sequence = GAAGGCCTTAGGTCACCT Gene: MSMEG_3932: heat shock protein HspX_1 |
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*
Mycobacterium tuberculosis H37Rv Site: position = -81 score = 4.55 sequence = CGGGGACTTCTGTCCCTA Site: position = -138 score = 4.61 sequence = CAGGGTCAATGGTCCCCA Gene: Rv2031c: heat shock protein HspX_1 |
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*
Mycobacterium vanbaalenii PYR-1 Site: position = -87 score = 4.27 sequence = GGAGGACTTCAGTCCCTA Gene: Mvan_1374: heat shock protein HspX_1 |
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heat shock protein HspX_1 |
| Mb2055c |
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2
Mycobacterium bovis AF2122/97 Gene: Mb2056c: Erythromycin esterase Gene: Mb2055c: Erythromycin esterase |
Gene: MMAR_3483: Erythromycin esterase |
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*
Mycobacterium sp. MCS Site: position = -81 score = 4.68 sequence = TAGGGCCCATTGTCCCCT Site: position = -44 score = 3.79 sequence = GGATGACTTCCGTCCCTA Gene: Mmcs_1081: Erythromycin esterase |
Gene: Rv2030c: Erythromycin esterase |
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*
Mycobacterium vanbaalenii PYR-1 Site: position = -274 score = 4.21 sequence = AGGGGTCTTTGGTCCTCG Gene: Mvan_1393: Erythromycin esterase |
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Erythromycin esterase |
| pfkB |
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Gene: Mb2054c: probable phosphofructokinase |
Gene: MMAR_3482: probable phosphofructokinase |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -51 score = 3.64 sequence = GTGCGACTTCGGTCCCTA Site: position = -145 score = 4.45 sequence = TAGGGACGAAAGTCTCAA Gene: MSMEG_3947: probable phosphofructokinase |
Gene: Mmcs_3412: probable phosphofructokinase |
Gene: Rv2029c: probable phosphofructokinase |
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*2
Mycobacterium vanbaalenii PYR-1 Site: position = -72 score = 4.66 sequence = CAGGGACTTAGGACCTTT Gene: Mvan_4105: probable phosphofructokinase Gene: Mvan_1394: probable phosphofructokinase |
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Gene: RHA1_ro00056: probable phosphofructokinase |
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probable phosphofructokinase |
| usp |
Gene: MAB_3904: universal stress protein |
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Gene: Mb2053c: universal stress protein |
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Gene: Mmcs_4127: universal stress protein |
Gene: Rv2028c: universal stress protein |
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universal stress protein |
| dosT |
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Gene: Mb2052c: two-component system sensor kinase, DosT |
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Gene: MSMEG_5241: two-component system sensor kinase, DosT |
Gene: Mmcs_4125: two-component system sensor kinase, DosT |
Gene: Rv2027c: two-component system sensor kinase, DosT |
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Gene: Mvan_1395: two-component system sensor kinase, DosT |
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two-component system sensor kinase, DosT |
| usp |
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Gene: Mb2051c: universal stress protein |
*3
Mycobacterium marinum M Site: position = -79 score = 3.77 sequence = AGCGGTCCAACGGCCCTC Gene: MMAR_3481: universal stress protein Site: position = -138 score = 4.2 sequence = TGGGGTCCATGGACTCTG Gene: MMAR_2995: universal stress protein Gene: MMAR_2983: universal stress protein |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -80 score = 4.7 sequence = AAAGGACCAAAGGCCCTT Gene: MSMEG_3950: universal stress protein |
*2
Mycobacterium sp. MCS Site: position = -102 score = 3.74 sequence = CATGGTCTTTGGTCCTCC Gene: Mmcs_1104: universal stress protein Gene: Mmcs_3411: universal stress protein |
Gene: Rv2026c: universal stress protein |
*
Mycobacterium ulcerans Agy99 Site: position = -138 score = 4.2 sequence = TGGGGTCCATGGACTCTG Gene: MUL_2236: universal stress protein |
2
Mycobacterium vanbaalenii PYR-1 Gene: Mvan_1378: universal stress protein Gene: Mvan_1386: universal stress protein |
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universal stress protein |
| Rv2025c |
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Gene: Mb2050c: hypotetical protein |
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Gene: Rv2025c: hypotetical protein |
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hypotetical protein |
| MAV_3502 |
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Gene: MAV_3502: hypothetical protein |
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*
Mycobacterium marinum M Site: position = -94 score = 4.35 sequence = AGGTGACTTACGGCCCTA Gene: MMAR_3486: hypothetical protein |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -88 score = 4.45 sequence = TTGAGACTTTCGTCCCTA Gene: MSMEG_3949: hypothetical protein |
*
Mycobacterium sp. MCS Site: position = -107 score = 4.1 sequence = AGGGGACTTAAGGCTCCT Site: position = -78 score = 4.16 sequence = TGGTGACTTTCGTCTCTA Gene: Mmcs_1089: hypothetical protein |
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*
Mycobacterium vanbaalenii PYR-1 Site: position = -105 score = 3.93 sequence = CAGGGACCTAAGCCACCA Site: position = -77 score = 3.91 sequence = GGGTGACTTTCGTCTCTA Gene: Mvan_1406: hypothetical protein |
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hypothetical protein |
| acs_1 |
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*
Mycobacterium marinum M Site: position = -266 score = 4.13 sequence = AAGGGCCTTTGGCCCCCG Site: position = -245 score = 3.58 sequence = CGACGACATAGGGCCCCG Gene: MMAR_3488: acetyl-coenzyme A synthetase Acs_1 |
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Gene: Mvan_1407: acetyl-coenzyme A synthetase Acs_1 |
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*
Saccharopolyspora erythraea NRRL 2338 Site: position = -72 score = 4.37 sequence = GAGGGACCTTGGCCCCTG Gene: SACE_2408: acetyl-coenzyme A synthetase Acs_1 |
acetyl-coenzyme A synthetase Acs_1 |
| phdA |
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Gene: MMAR_3489: pyruvate dehydrogenase E1 component (alpha subunit) |
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Gene: Mmcs_1091: pyruvate dehydrogenase E1 component (alpha subunit) |
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Gene: Mvan_1408: pyruvate dehydrogenase E1 component (alpha subunit) |
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Gene: SACE_2407: pyruvate dehydrogenase E1 component (alpha subunit) |
pyruvate dehydrogenase E1 component (alpha subunit) |
| phdB |
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Gene: MMAR_3490: pyruvate dehydrogenase E1 component (beta subunit) |
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Gene: Mmcs_1092: pyruvate dehydrogenase E1 component (beta subunit) |
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Gene: Mvan_1409: pyruvate dehydrogenase E1 component (beta subunit) |
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Gene: SACE_2406: pyruvate dehydrogenase E1 component (beta subunit) |
pyruvate dehydrogenase E1 component (beta subunit) |
| Rv1734c |
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*
Mycobacterium bovis AF2122/97 Site: position = -48 score = 4.55 sequence = TGGGGACCGAAGTCCCCG Gene: Mb1763c: pyruvate dehydrogenase (E2 component) |
Gene: MMAR_3491: pyruvate dehydrogenase (E2 component) |
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Gene: Mmcs_1093: pyruvate dehydrogenase (E2 component) |
*
Mycobacterium tuberculosis H37Rv Site: position = -48 score = 4.55 sequence = TGGGGACCGAAGTCCCCG Gene: Rv1734c: pyruvate dehydrogenase (E2 component) |
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Gene: Mvan_1410: pyruvate dehydrogenase (E2 component) |
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Gene: SACE_2405: pyruvate dehydrogenase (E2 component) |
pyruvate dehydrogenase (E2 component) |
| MMAR_3492 |
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Gene: MMAR_3492: hypothetical protein |
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Gene: Mvan_1411: hypothetical protein |
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Gene: SACE_2404: hypothetical protein |
hypothetical protein |
| Rv2625c |
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Gene: Mb2658c: conserved transmembrane alanine and leucine rich protein |
Gene: MMAR_2075: conserved transmembrane alanine and leucine rich protein |
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Gene: Rv2625c: conserved transmembrane alanine and leucine rich protein |
*
Mycobacterium ulcerans Agy99 Site: position = -108 score = 4.53 sequence = GAAGGCCGAACGGCCCTA Gene: MUL_3269: conserved transmembrane alanine and leucine rich protein |
Gene: Mvan_1412: conserved transmembrane alanine and leucine rich protein |
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3
Saccharopolyspora erythraea NRRL 2338 Gene: SACE_2437: conserved transmembrane alanine and leucine rich protein Gene: SACE_2663: conserved transmembrane alanine and leucine rich protein Gene: SACE_2505: conserved transmembrane alanine and leucine rich protein |
conserved transmembrane alanine and leucine rich protein |
| dosS |
Gene: MAB_3890c: two-component sensor histidine kinase, DosS |
2
Mycobacterium avium 104 Gene: MAV_2508: two-component sensor histidine kinase, DosS Gene: MAV_4108: two-component sensor histidine kinase, DosS |
Gene: Mb3156c: two-component sensor histidine kinase, DosS |
2
Mycobacterium marinum M Gene: MMAR_1517: two-component sensor histidine kinase, DosS Gene: MMAR_3479: two-component sensor histidine kinase, DosS |
2
Mycobacterium smegmatis str. MC2 155 Gene: MSMEG_3941: two-component sensor histidine kinase, DosS Gene: MSMEG_4614: two-component sensor histidine kinase, DosS |
Gene: Mmcs_1077: two-component sensor histidine kinase, DosS |
Gene: Rv3132c: two-component sensor histidine kinase, DosS |
Gene: MUL_2422: two-component sensor histidine kinase, DosS |
*2
Mycobacterium vanbaalenii PYR-1 Site: position = -89 score = 4.03 sequence = CGGGGTCGAAGTGCCCTT Gene: Mvan_1421: two-component sensor histidine kinase, DosS Gene: Mvan_1413: two-component sensor histidine kinase, DosS |
Gene: nfa28940: two-component sensor histidine kinase, DosS |
2
Rhodococcus sp. RHA1 Gene: RHA1_ro00049: two-component sensor histidine kinase, DosS Gene: RHA1_ro02255: two-component sensor histidine kinase, DosS |
Gene: SACE_0145: two-component sensor histidine kinase, DosS |
two-component sensor histidine kinase, DosS |
| Rv3131 |
|
*
Mycobacterium avium 104 Site: position = -102 score = 3.88 sequence = TACGGCACAAAGTCCCTC Site: position = -80 score = 3.37 sequence = CAGGGGACGTCGTCCCCT Gene: MAV_2502: nitroreductase |
*
Mycobacterium bovis AF2122/97 Site: position = -109 score = 4.32 sequence = CAGGGCCAAAGGTCCTCC Gene: Mb3155: nitroreductase |
*2
Mycobacterium marinum M Site: position = -116 score = 4.76 sequence = CAGGGCCAAAGGTCCCTC Gene: MMAR_1518: nitroreductase Site: position = -100 score = 3.74 sequence = AATGGCACAAAGTCCCTC Gene: MMAR_3502: nitroreductase |
Gene: MSMEG_3955: nitroreductase |
*3
Mycobacterium sp. MCS Site: position = -128 score = 4.74 sequence = ACGGGCCGATGGTCCCTA Gene: Mmcs_1078: nitroreductase Site: position = -76 score = 4.56 sequence = TCGGGACCTTCGTCTCTG Gene: Mmcs_1107: nitroreductase Site: position = -51 score = 4.35 sequence = TCGGGCCTTTGTGCCCTA Gene: Mmcs_4124: nitroreductase |
*
Mycobacterium tuberculosis H37Rv Site: position = -109 score = 4.32 sequence = CAGGGCCAAAGGTCCTCC Gene: Rv3131: nitroreductase |
*
Mycobacterium ulcerans Agy99 Site: position = -68 score = 4.76 sequence = CAGGGCCAAAGGTCCCTC Gene: MUL_2421: nitroreductase |
|
|
*
Rhodococcus sp. RHA1 Site: position = -89 score = 4.38 sequence = TCGGGACCTTCGACCCAA Gene: RHA1_ro02257: nitroreductase |
*2
Saccharopolyspora erythraea NRRL 2338 Site: position = -127 score = 4.1 sequence = CAGGGACCAACGGCCACC Gene: SACE_2452: nitroreductase Gene: SACE_2449: nitroreductase |
nitroreductase |
| Rv1733c |
|
Gene: MAV_1986: probable conserved transmembrane protein |
*
Mycobacterium bovis AF2122/97 Site: position = -145 score = 4.24 sequence = AAGGGGCGAAAGTCCCTT Site: position = -63 score = 4.06 sequence = TCGTGACCGACGTCCCCA Site: position = -41 score = 4.57 sequence = CAAGGCCGAACGACCCTA Gene: Mb1762c: probable conserved transmembrane protein |
Gene: MMAR_3501: probable conserved transmembrane protein |
Gene: MSMEG_1738: probable conserved transmembrane protein |
|
*
Mycobacterium tuberculosis H37Rv Site: position = -145 score = 4.24 sequence = AAGGGGCGAAAGTCCCTT Site: position = -63 score = 4.06 sequence = TCGTGACCGACGTCCCCA Site: position = -41 score = 4.57 sequence = CAAGGCCGAACGACCCTA Gene: Rv1733c: probable conserved transmembrane protein |
|
|
|
|
|
probable conserved transmembrane protein |
| MMAR_3500 |
|
|
|
Gene: MMAR_3500: ferredoxin |
|
|
|
|
|
|
Gene: RHA1_ro00037: ferredoxin |
|
ferredoxin |
| MMAR_3499 |
|
|
|
Gene: MMAR_3499: flavodoxin oxidoreductase |
Gene: MSMEG_3930: flavodoxin oxidoreductase |
Gene: Mmcs_3418: flavodoxin oxidoreductase |
|
|
|
|
Gene: RHA1_ro00035: flavodoxin oxidoreductase |
|
flavodoxin oxidoreductase |
| MMAR_3498 |
|
|
|
Gene: MMAR_3498: NADH ubiquinone oxidoreductase, 20 kDa subunit |
Gene: MSMEG_3929: NADH ubiquinone oxidoreductase, 20 kDa subunit |
Gene: Mmcs_3417: NADH ubiquinone oxidoreductase, 20 kDa subunit |
|
|
|
|
Gene: RHA1_ro00034: NADH ubiquinone oxidoreductase, 20 kDa subunit |
|
NADH ubiquinone oxidoreductase, 20 kDa subunit |
| MMAR_3497 |
|
|
|
Gene: MMAR_3497: oxidoreductase |
Gene: MSMEG_3928: oxidoreductase |
Gene: Mmcs_3416: oxidoreductase |
|
|
|
|
Gene: RHA1_ro00033: oxidoreductase |
|
oxidoreductase |
| MMAR_3496 |
|
|
|
Gene: MMAR_3496: hypothetical protein |
Gene: MSMEG_3927: hypothetical protein |
Gene: Mmcs_3415: hypothetical protein |
|
|
|
|
Gene: RHA1_ro00032: hypothetical protein |
|
hypothetical protein |
| MSMEG_3931 |
|
|
|
|
Gene: MSMEG_3931: 4Fe-4S ferredoxin, iron-sulfur binding protein |
Gene: Mmcs_3419: 4Fe-4S ferredoxin, iron-sulfur binding protein |
|
|
|
|
|
|
4Fe-4S ferredoxin, iron-sulfur binding protein |
| MSMEG_3926 |
|
|
|
|
Gene: MSMEG_3926: cation transportind ATPase |
|
|
|
Gene: Mvan_1648: cation transportind ATPase |
|
|
|
cation transportind ATPase |
| MAV_4110 |
|
*
Mycobacterium avium 104 Site: position = -138 score = 3.98 sequence = CAACGACTTTGGTCCCGA Gene: MAV_4110: hypothetical protein |
|
Gene: MMAR_3493: hypothetical protein |
Gene: MSMEG_5243: hypothetical protein |
*
Mycobacterium sp. MCS Site: position = -47 score = 4.46 sequence = TGGGGTCTTTCGACCCTG Site: position = -79 score = 4.14 sequence = GCGGGTCGAACGTCCCGA Gene: Mmcs_1083: hypothetical protein |
|
|
Gene: Mvan_0633: hypothetical protein |
|
|
|
hypothetical protein |
| PE_PGRS62 |
|
|
|
Gene: MMAR_3494: PE-PGRS family protein |
|
|
|
|
|
|
|
|
PE-PGRS FAMILY PROTEIN |
| acg |
*
Mycobacterium abscessus ATCC 19977 Site: position = -161 score = 3.74 sequence = GTGGGACCGAAGTCACCA Site: position = -96 score = 3.88 sequence = CGGTGACTTCGGGCCCCT Site: position = -75 score = 4.51 sequence = CGGTGACCAAGGGCCCTG Gene: MAB_3903: nitroreductase |
|
*
Mycobacterium bovis AF2122/97 Site: position = -76 score = 4.61 sequence = TGGGGACCATTGACCCTG Site: position = -133 score = 4.55 sequence = TAGGGACAGAAGTCCCCG Gene: Mb2058: nitroreductase |
*
Mycobacterium marinum M Site: position = -59 score = 3.88 sequence = GAATGACGAATGACCCTA Gene: MMAR_1522: nitroreductase |
*2
Mycobacterium smegmatis str. MC2 155 Site: position = -104 score = 4.77 sequence = TGAGGACCATAGTCCCTG Site: position = -125 score = 4.46 sequence = CAGGGTCCTACGGCCCCC Gene: MSMEG_3943: nitroreductase Site: position = -51 score = 4.61 sequence = TGAGGACCAAAGACCCTA Gene: MSMEG_5246: nitroreductase |
*2
Mycobacterium sp. MCS Site: position = -107 score = 4.36 sequence = CGGGGCCATTGGTCCTCA Gene: Mmcs_1075: nitroreductase Site: position = -51 score = 4.6 sequence = ACAGGACCTAAGGCCCTA Gene: Mmcs_4128: nitroreductase |
*
Mycobacterium tuberculosis H37Rv Site: position = -133 score = 4.55 sequence = TAGGGACAGAAGTCCCCG Site: position = -76 score = 4.61 sequence = TGGGGACCATTGACCCTG Gene: Rv2032: nitroreductase |
*
Mycobacterium ulcerans Agy99 Site: position = -53 score = 3.88 sequence = GAATGACGAATGACCCTA Gene: MUL_2417: nitroreductase |
*
Mycobacterium vanbaalenii PYR-1 Site: position = -71 score = 4.54 sequence = TGAGGACCATTGGCCCTG Gene: Mvan_1383: nitroreductase |
*
Nocardia farcinica IFM 10152 Site: position = -74 score = 4.14 sequence = CAGGGCCGGTCGGCCCGC Site: position = -188 score = 3.52 sequence = CCGGGGACAAAGTCCCCG Site: position = -96 score = 3.42 sequence = AAGAGTCGCCGGTCCCTT Gene: nfa27670: nitroreductase |
*
Rhodococcus sp. RHA1 Site: position = -110 score = 4.27 sequence = CGATGACCTACGGCCCTA Gene: RHA1_ro00027: nitroreductase |
|
nitroreductase |
| usp |
|
*2
Mycobacterium avium 104 Site: position = -83 score = 4.2 sequence = TAGAGCCGTCGGGCCCTC Site: position = -105 score = 3.79 sequence = ATCGGCCGAAAGTCCCTC Gene: MAV_4111: universal stress protein Gene: MAV_2506: universal stress protein |
|
*
Mycobacterium marinum M Site: position = -31 score = 3.42 sequence = GCAGGCCAGCGGTCCCGG Site: position = -106 score = 4.58 sequence = CGGGGCCAAACGGCCCTG Gene: MMAR_3478: universal stress protein |
*2
Mycobacterium smegmatis str. MC2 155 Site: position = -79 score = 4.34 sequence = CCGGGACTTAGGTCACCA Site: position = -150 score = 4.05 sequence = AAGGGACCGAAGTCCACG Gene: MSMEG_3939: universal stress protein Gene: MSMEG_5245: universal stress protein |
*2
Mycobacterium sp. MCS Site: position = -84 score = 5.07 sequence = AAGGGACCAAAGGCCCTA Gene: Mmcs_3621: universal stress protein Gene: Mmcs_1072: universal stress protein |
|
|
Gene: Mvan_2549: universal stress protein |
*
Nocardia farcinica IFM 10152 Site: position = -106 score = 4.07 sequence = GTGGGCCTTTCGGCCCCT Gene: nfa28970: universal stress protein |
Gene: RHA1_ro02149: universal stress protein |
10
Saccharopolyspora erythraea NRRL 2338 Gene: SACE_2457: universal stress protein Gene: SACE_2416: universal stress protein Gene: SACE_2466: universal stress protein Gene: SACE_2465: universal stress protein Gene: SACE_2409: universal stress protein Gene: SACE_2436: universal stress protein Gene: SACE_2421: universal stress protein Gene: SACE_3381: universal stress protein Gene: SACE_2444: universal stress protein Gene: SACE_2443: universal stress protein |
universal stress protein |
| dosR |
*
Mycobacterium abscessus ATCC 19977 Site: position = -132 score = 4.48 sequence = TAGGGACCAAAGACCGTA Gene: MAB_3891c: two component transcriptional regulator, DosR |
*
Mycobacterium avium 104 Site: position = -93 score = 3.98 sequence = TCGGGACCAAAGTCGTTG Site: position = -115 score = 3.57 sequence = GGCGGCCGAAGGTCCTCT Gene: MAV_4109: two component transcriptional regulator, DosR |
Gene: Mb3157c: two component transcriptional regulator, DosR |
2
Mycobacterium marinum M Gene: MMAR_1516: two component transcriptional regulator, DosR Gene: MMAR_3480: two component transcriptional regulator, DosR |
2
Mycobacterium smegmatis str. MC2 155 Gene: MSMEG_3944: two component transcriptional regulator, DosR Gene: MSMEG_5244: two component transcriptional regulator, DosR |
2
Mycobacterium sp. MCS Gene: Mmcs_1076: two component transcriptional regulator, DosR Gene: Mmcs_4126: two component transcriptional regulator, DosR |
Gene: Rv3133c: two component transcriptional regulator, DosR |
Gene: MUL_2423: two component transcriptional regulator, DosR |
*2
Mycobacterium vanbaalenii PYR-1 Gene: Mvan_2548: two component transcriptional regulator, DosR Site: position = -75 score = 4.28 sequence = CGGGGACCTGCGGCCCTA Site: position = -98 score = 3.93 sequence = CAGAGTCCGAGGTCCTTC Gene: Mvan_1427: two component transcriptional regulator, DosR |
*2
Nocardia farcinica IFM 10152 Gene: nfa19100: two component transcriptional regulator, DosR Site: position = -124 score = 4.21 sequence = CAGGGTCGGAGGACCCTC Gene: nfa28950: two component transcriptional regulator, DosR |
*2
Rhodococcus sp. RHA1 Site: position = -101 score = 4.38 sequence = TTGGGTCGAAGGTCCCGA Gene: RHA1_ro02256: two component transcriptional regulator, DosR Site: position = -489 score = 4.41 sequence = TGGTGACTTTCGGCCCTG Gene: RHA1_ro00048: two component transcriptional regulator, DosR |
Gene: SACE_0148: two component transcriptional regulator, DosR |
two component transcriptional regulator, DosR |
| MSMEG_5242 |
|
|
|
|
Gene: MSMEG_5242: acyltransferase, ws/dgat/mgat subfamily protein |
*
Mycobacterium sp. MCS Site: position = -52 score = 4.74 sequence = TCGGGACCAATGGCCCTG Gene: Mmcs_3541: acyltransferase, ws/dgat/mgat subfamily protein |
|
|
|
|
|
|
acyltransferase, ws/dgat/mgat subfamily protein |
| SACE_2447 |
|
|
|
|
|
|
|
|
|
|
|
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -29 score = 4.15 sequence = CAGAGCCCATAGGCCCGC Gene: SACE_2447: beta-phosphoglucomutase hydrolase |
beta-phosphoglucomutase hydrolase |
| usp |
|
|
|
|
|
|
|
|
*
Mycobacterium vanbaalenii PYR-1 Site: position = -200 score = 4.77 sequence = ACGGGACCAACGGCCCTA Gene: Mvan_1415: universal stress protein |
|
|
5
Saccharopolyspora erythraea NRRL 2338 Gene: SACE_4517: universal stress protein Gene: SACE_4520: universal stress protein Gene: SACE_3386: universal stress protein Gene: SACE_3380: universal stress protein Gene: SACE_2446: universal stress protein |
universal stress protein |
| otsB1 |
|
|
*
Mycobacterium bovis AF2122/97 Site: position = -66 score = 3.45 sequence = ATGAGGCTTTAGTCCCCA Gene: Mb2029: trehalose-6-phosphate phosphatase |
*
Mycobacterium marinum M Site: position = -119 score = 4.1 sequence = CCGGGACTTTTGTCACCA Gene: MMAR_2257: trehalose-6-phosphate phosphatase |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -81 score = 4.42 sequence = CAGGGCCGTTGGTCACCG Gene: MSMEG_3954: trehalose-6-phosphate phosphatase |
Gene: Mmcs_3407: trehalose-6-phosphate phosphatase |
*
Mycobacterium tuberculosis H37Rv Site: position = -66 score = 3.45 sequence = ATGAGGCTTTAGTCCCCA Gene: Rv2006: trehalose-6-phosphate phosphatase |
|
Gene: Mvan_4107: trehalose-6-phosphate phosphatase |
Gene: nfa27660: trehalose-6-phosphate phosphatase |
Gene: RHA1_ro00045: trehalose-6-phosphate phosphatase |
Gene: SACE_2445: trehalose-6-phosphate phosphatase |
trehalose-6-phosphate phosphatase |
| usp |
|
|
|
|
|
|
|
|
|
|
*
Rhodococcus sp. RHA1 Site: position = -73 score = 4.8 sequence = TGGGGACTTAAGTCCCTC Gene: RHA1_ro02263: universal stress protein |
2
Saccharopolyspora erythraea NRRL 2338 Gene: SACE_2417: universal stress protein Gene: SACE_2442: universal stress protein |
universal stress protein |
| Rv0079 |
|
|
*
Mycobacterium bovis AF2122/97 Site: position = -88 score = 4.56 sequence = ATGGGACTTTCGGCCCTG Gene: Mb0082: hypothetical protein |
*2
Mycobacterium marinum M Site: position = -68 score = 4.84 sequence = CAAGGACTTTCGGCCCTA Gene: MMAR_3705: hypothetical protein Site: position = -52 score = 4.52 sequence = CGAGGACCTTTGGCCCTG Gene: MMAR_0944: hypothetical protein |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -81 score = 4.27 sequence = AGGTGACTTTCGGCCCTG Gene: MSMEG_3935: hypothetical protein |
*
Mycobacterium sp. MCS Site: position = -40 score = 4.05 sequence = AGGTGACCAATGACCCTG Gene: Mmcs_1095: hypothetical protein |
*
Mycobacterium tuberculosis H37Rv Site: position = -88 score = 4.56 sequence = ATGGGACTTTCGGCCCTG Gene: Rv0079: hypothetical protein |
*2
Mycobacterium ulcerans Agy99 Site: position = -68 score = 4.84 sequence = CAAGGACTTTCGGCCCTA Gene: MUL_3647: hypothetical protein Site: position = -52 score = 4.52 sequence = CGAGGACCTTTGGCCCTG Gene: MUL_0695: hypothetical protein |
*
Mycobacterium vanbaalenii PYR-1 Site: position = -52 score = 4.27 sequence = CGATGACCTTAGGCCCTA Gene: Mvan_1377: hypothetical protein |
*
Nocardia farcinica IFM 10152 Site: position = -81 score = 4.58 sequence = CGAGGACTTTCGGCCCTG Gene: nfa19090: hypothetical protein |
|
Gene: SACE_2397: hypothetical protein |
hypothetical protein |
| Mvan_1379 |
|
|
|
|
|
|
|
|
Gene: Mvan_1379: putative conserved transmembrane protein |
|
|
|
putative conserved transmembrane protein |
| Mmcs_1073 |
|
|
|
|
|
Gene: Mmcs_1073: alcohol dehydrogenase GroES-like protein |
|
|
Gene: Mvan_1380: alcohol dehydrogenase GroES-like protein |
|
|
|
alcohol dehydrogenase GroES-like protein |
| usp |
|
|
Gene: Mb2657c: universal stress protein |
Gene: MMAR_2076: universal stress protein |
|
*2
Mycobacterium sp. MCS Gene: Mmcs_1105: universal stress protein Site: position = -123 score = 5.02 sequence = CAGGGACTTTCGGCCCTG Site: position = -185 score = 3.9 sequence = TACGGGCCAAAGTCCCTT Gene: Mmcs_1087: universal stress protein |
Gene: Rv2624c: universal stress protein |
|
*2
Mycobacterium vanbaalenii PYR-1 Gene: Mvan_1381: universal stress protein Site: position = -80 score = 4.12 sequence = CGATGACCAATGGCCCTA Gene: Mvan_1387: universal stress protein |
|
|
|
universal stress protein |
| MMAR_3410 |
|
|
|
Gene: MMAR_3410: pyruvate dikinase |
|
*
Mycobacterium sp. MCS Site: position = -76 score = 3.57 sequence = GTGTGACTTCCGACCCTG Gene: Mmcs_3406: pyruvate dikinase |
|
|
*
Mycobacterium vanbaalenii PYR-1 Site: position = -88 score = 4.22 sequence = GGGTGACCTTCGGCCCTG Site: position = -111 score = 3.49 sequence = GCGGGTCGGCCGTCCCCT Gene: Mvan_4106: pyruvate dikinase |
|
|
|
pyruvate dikinase |
| gltD |
|
|
|
*
Mycobacterium marinum M Site: position = -75 score = 4.52 sequence = CAGGGTCAGAAGTCCCTA Gene: MMAR_3407: NADH-dependent glutamate synthase (small subunit) GltD |
|
Gene: Mmcs_4866: NADH-dependent glutamate synthase (small subunit) GltD |
|
|
Gene: Mvan_4108: NADH-dependent glutamate synthase (small subunit) GltD |
|
|
|
NADH-dependent glutamate synthase (small subunit) GltD |
| MMAR_3408 |
|
|
|
Gene: MMAR_3408: Pyruvate:ferredoxin (flavodoxin) oxidoreductase |
|
Gene: Mmcs_4865: Pyruvate:ferredoxin (flavodoxin) oxidoreductase |
|
|
Gene: Mvan_4109: Pyruvate:ferredoxin (flavodoxin) oxidoreductase |
|
|
|
Pyruvate:ferredoxin (flavodoxin) oxidoreductase |
| MMAR_3409 |
|
|
|
Gene: MMAR_3409: dihydroorotate dehydrogenase |
|
Gene: Mmcs_4864: dihydroorotate dehydrogenase |
|
|
Gene: Mvan_4110: dihydroorotate dehydrogenase |
|
|
|
dihydroorotate dehydrogenase |
| SACE_2418 |
|
|
|
|
|
|
|
|
|
|
|
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -123 score = 3.72 sequence = AGGTGACCTGAGGCCCTG Gene: SACE_2418: putative signal-transduction protein with CBS domains |
putative signal-transduction protein with CBS domains |
| SACE_2415 |
|
|
|
|
|
|
|
|
|
|
|
2
Saccharopolyspora erythraea NRRL 2338 Gene: SACE_2415: integral membrane protein Gene: SACE_3236: integral membrane protein |
integral membrane protein |
| MMAR_3503 |
|
|
|
*
Mycobacterium marinum M Site: position = -149 score = 3.81 sequence = CGAAGTCCTAAGGCCCGG Site: position = -126 score = 3.98 sequence = CTGGGTATTACGGCCCTA Gene: MMAR_3503: metal cation transporter p-type ATPase |
|
Gene: Mmcs_1079: metal cation transporter p-type ATPase |
|
|
Gene: Mvan_1385: metal cation transporter p-type ATPase |
|
Gene: RHA1_ro00052: metal cation transporter p-type ATPase |
Gene: SACE_2414: metal cation transporter p-type ATPase |
metal cation transporter p-type ATPase |
| Mb2660c |
|
|
*
Mycobacterium bovis AF2122/97 Site: position = -52 score = 4.71 sequence = GCGGGACGTAAGTCCCTA Site: position = -121 score = 3.65 sequence = TAGGGCACTTGGGCCACC Site: position = -291 score = 4.16 sequence = TGGGGTCTTTCGTCACTT Gene: Mb2660c: hypothetical protein |
*
Mycobacterium marinum M Site: position = -53 score = 4.72 sequence = TCGGGACGTAAGACCCTA Site: position = -119 score = 4.07 sequence = TAGGGCCCAAAGTCATCC Gene: MMAR_2072: hypothetical protein |
|
|
*
Mycobacterium tuberculosis H37Rv Site: position = -52 score = 4.71 sequence = GCGGGACGTAAGTCCCTA Site: position = -121 score = 3.65 sequence = TAGGGCACTTGGGCCACC Site: position = -291 score = 4.16 sequence = TGGGGTCTTTCGTCACTT Gene: Rv2627c: hypothetical protein |
|
|
|
|
|
hypothetical protein |
| DGAT |
|
|
|
Gene: MMAR_2073: wax-dgat acyltransferase |
|
Gene: Mmcs_4258: wax-dgat acyltransferase |
|
Gene: MUL_3271: wax-dgat acyltransferase |
Gene: Mvan_0444: wax-dgat acyltransferase |
|
|
|
wax-dgat acyltransferase |
| MMAR_2074 |
|
|
|
Gene: MMAR_2074: hypothetical protein |
|
*
Mycobacterium sp. MCS Site: position = -52 score = 4.68 sequence = AGGGGACAATGGGCCCTA Site: position = -89 score = 3.79 sequence = TAGGGACGGAAGTCATCC Gene: Mmcs_1082: hypothetical protein |
|
|
Gene: Mvan_1376: hypothetical protein |
|
|
|
hypothetical protein |
| Rv1996 |
|
|
*
Mycobacterium bovis AF2122/97 Site: position = -75 score = 3.82 sequence = TAGGGACCATCGCCTCCT Gene: Mb2019: universal stress protein |
*
Mycobacterium marinum M Site: position = -113 score = 3.71 sequence = AAGGGACCAACGCCTCCT Gene: MMAR_5410: universal stress protein |
2
Mycobacterium smegmatis str. MC2 155 Gene: MSMEG_3945: universal stress protein Gene: MSMEG_3936: universal stress protein |
*2
Mycobacterium sp. MCS Site: position = -52 score = 5.06 sequence = CAGGGTCCAAGGTCCCTA Gene: Mmcs_1102: universal stress protein Site: position = -148 score = 4.81 sequence = CCGGGACCAACGGCCCTG Gene: Mmcs_1097: universal stress protein |
*
Mycobacterium tuberculosis H37Rv Site: position = -75 score = 3.82 sequence = TAGGGACCATCGCCTCCT Gene: Rv1996: universal stress protein |
*
Mycobacterium ulcerans Agy99 Site: position = -113 score = 3.71 sequence = AAGGGACCAACGCCTCCT Gene: MUL_5033: universal stress protein |
Gene: Mvan_1402: universal stress protein |
|
2
Rhodococcus sp. RHA1 Gene: RHA1_ro00061: universal stress protein Gene: RHA1_ro00026: universal stress protein |
|
universal stress protein |
| Mmcs_1098 |
|
|
|
|
|
Gene: Mmcs_1098: hypothetical protein |
|
|
Gene: Mvan_1416: hypothetical protein |
|
|
|
hypothetical protein |
| Mmcs_1099 |
|
|
|
|
|
Gene: Mmcs_1099: magnesium and cobalt efflux protein CorC |
|
|
Gene: Mvan_1422: magnesium and cobalt efflux protein CorC |
|
|
Gene: SACE_5784: magnesium and cobalt efflux protein CorC |
magnesium and cobalt efflux protein CorC |
| merR2 |
|
|
|
|
|
Gene: Mmcs_1100: HAD-superfamily hydrolase subfamily IIB |
|
|
Gene: Mvan_1423: HAD-superfamily hydrolase subfamily IIB |
|
|
|
HAD-superfamily hydrolase subfamily IIB |
| DGAT |
|
|
|
|
*
Mycobacterium smegmatis str. MC2 155 Site: position = -60 score = 3.57 sequence = ATGGGACTTCTGCCCCTG Gene: MSMEG_3948: wax-dgat acyltransferase |
*
Mycobacterium sp. MCS Site: position = -18 score = 4.4 sequence = TCGGGACTTCAGACCCTG Site: position = -72 score = 4.61 sequence = CAGGGCCGTTGGTCTCTT Gene: Mmcs_3409: wax-dgat acyltransferase |
|
|
|
|
|
|
wax-dgat acyltransferase |
| MAV_2505 |
|
*
Mycobacterium avium 104 Site: position = -81 score = 4.73 sequence = ACGGGACCTAGGACCCTA Gene: MAV_2505: nitroreductase |
|
*
Mycobacterium marinum M Site: position = -70 score = 4.13 sequence = CGGGGGCCAAAGGCCCTT Gene: MMAR_3487: nitroreductase |
|
Gene: Mmcs_3410: nitroreductase |
|
|
|
|
|
|
nitroreductase |
| SACE_2434 |
|
|
|
|
|
|
|
|
|
|
|
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -149 score = 3.79 sequence = CCGTGACGAAATGCCCTG Gene: SACE_2434: hypothetical protein |
hypothetical protein |
| SACE_2435 |
|
|
|
|
|
|
|
|
|
|
|
Gene: SACE_2435: UspA domain protein |
UspA domain protein |
| RHA1_ro00030 |
|
|
|
|
|
|
|
|
|
|
*
Rhodococcus sp. RHA1 Site: position = -90 score = 4.65 sequence = TAGGGCCGATGGTCACTG Site: position = -52 score = 4.34 sequence = TCGGGCCGGAAGACCCTA Gene: RHA1_ro00030: ABC transporter, ATP-binding protein |
|
ABC transporter, ATP-binding protein |
| Mmcs_2205 |
|
|
|
|
|
|
|
|
|
|
Gene: RHA1_ro00029: probable ABC transporter, permease component |
|
Putative exporter of polyketide antibiotics-like protein |
| usp |
|
|
|
|
|
|
|
|
|
|
Gene: RHA1_ro00028: universal stress protein |
|
universal stress protein |
| Rv3134c |
|
*
Mycobacterium avium 104 Site: position = -101 score = 3.94 sequence = TGGGGACCAACGCCTCTG Site: position = -122 score = 3.99 sequence = TAGGGTCTTATGGCACCT Gene: MAV_4010: universal stress protein |
*
Mycobacterium bovis AF2122/97 Site: position = -91 score = 4.32 sequence = TGGGGACCAACGCCCCTG Site: position = -112 score = 4.64 sequence = TAAGGACTAACGGCCCTC Gene: Mb3158c: universal stress protein |
*
Mycobacterium marinum M Site: position = -81 score = 3.88 sequence = TCGGGACCAACGCCTCTG Site: position = -102 score = 4.56 sequence = TAGGGACCAATGGCACTG Gene: MMAR_1515: universal stress protein |
|
|
*
Mycobacterium tuberculosis H37Rv Site: position = -112 score = 4.64 sequence = TAAGGACTAACGGCCCTC Site: position = -91 score = 4.32 sequence = TGGGGACCAACGCCCCTG Gene: Rv3134c: universal stress protein |
*
Mycobacterium ulcerans Agy99 Site: position = -102 score = 4.68 sequence = TAGGGACCAACGGCACTG Gene: MUL_2424: universal stress protein |
Gene: Mvan_1382: universal stress protein |
|
|
|
universal stress protein |
| nitroreductase |
|
|
|
*
Mycobacterium marinum M Site: position = -74 score = 4.65 sequence = GAAGGACCAACGGCCCTG Gene: MMAR_3475: nitroreductase |
|
|
|
|
*
Mycobacterium vanbaalenii PYR-1 Site: position = -72 score = 4.54 sequence = TGAGGACCATTGGCCCTG Gene: Mvan_2550: nitroreductase |
|
*
Rhodococcus sp. RHA1 Site: position = -123 score = 4.34 sequence = TAGGGTCTTCCGGCCCGA Site: position = -85 score = 4.65 sequence = CAGTGACCATCGGCCCTA Gene: RHA1_ro00031: nitroreductase |
Gene: SACE_2458: nitroreductase |
nitroreductase |
| MMAR_3474 |
|
|
|
Gene: MMAR_3474: 3-oxoacyl-(acyl-carrier protein) synthase |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -51 score = 4.42 sequence = CGGTGACCAACGGCCCTG Gene: MSMEG_3953: 3-oxoacyl-(acyl-carrier protein) synthase |
*
Mycobacterium sp. MCS Site: position = -57 score = 4.27 sequence = AAGGGTCCAAATGCCCTG Gene: Mmcs_3414: 3-oxoacyl-(acyl-carrier protein) synthase |
|
|
|
Gene: nfa34550: 3-oxoacyl-(acyl-carrier protein) synthase |
*
Rhodococcus sp. RHA1 Site: position = -117 score = 4.27 sequence = AAGGGTCCAAATGCCCTG Site: position = -176 score = 4.32 sequence = AAGGGTCCTAGGACCTCA Gene: RHA1_ro00058: 3-oxoacyl-(acyl-carrier protein) synthase |
|
3-oxoacyl-(acyl-carrier protein) synthase |
| MMAR_3473 |
|
|
|
Gene: MMAR_3473: 3-oxoacyl-[acyl-carrier-protein] synthase III |
Gene: MSMEG_3951: 3-oxoacyl-[acyl-carrier-protein] synthase III |
Gene: Mmcs_3413: 3-oxoacyl-[acyl-carrier-protein] synthase III |
|
|
|
Gene: nfa34560: 3-oxoacyl-[acyl-carrier-protein] synthase III |
Gene: RHA1_ro00057: 3-oxoacyl-[acyl-carrier-protein] synthase III |
|
3-oxoacyl-[acyl-carrier-protein] synthase III |
| RHA1_ro00151 |
|
|
|
|
|
|
|
|
|
|
*2
Rhodococcus sp. RHA1 Site: position = -68 score = 4.32 sequence = TGAGGTCCTAGGACCCTT Site: position = -127 score = 4.27 sequence = CAGGGCATTTGGACCCTT Gene: RHA1_ro00059: probable IMP dehydrogenase Gene: RHA1_ro00151: probable IMP dehydrogenase |
|
probable IMP dehydrogenase |
| RHA1_ro00060 |
|
|
|
|
|
|
|
|
|
|
Gene: RHA1_ro00060: hypothetical protein |
|
hypothetical protein |
| RHA1_ro00025 |
|
|
|
|
|
|
|
|
|
|
*
Rhodococcus sp. RHA1 Site: position = -137 score = 4.33 sequence = CGATGACCTTGGGCCCTA Gene: RHA1_ro00025: hypothetical protein |
|
hypothetical protein |
| DGAT |
|
|
*
Mycobacterium bovis AF2122/97 Site: position = -93 score = 4.32 sequence = GGAGGACCTTTGGCCCTG Gene: Mb3154c: wax-dgat acyltransferase |
*
Mycobacterium marinum M Site: position = -93 score = 4.76 sequence = GAGGGACCTTTGGCCCTG Gene: MMAR_1519: wax-dgat acyltransferase |
|
|
*
Mycobacterium tuberculosis H37Rv Site: position = -93 score = 4.32 sequence = GGAGGACCTTTGGCCCTG Gene: Rv3130c: wax-dgat acyltransferase |
*
Mycobacterium ulcerans Agy99 Site: position = -93 score = 4.76 sequence = GAGGGACCTTTGGCCCTG Gene: MUL_2420: wax-dgat acyltransferase |
|
|
Gene: RHA1_ro00024: wax-dgat acyltransferase |
|
wax-dgat acyltransferase |
| DGAT |
|
|
Gene: Mb3114: wax-dgat acyltransferase |
*2
Mycobacterium marinum M Gene: MMAR_2599: wax-dgat acyltransferase Site: position = -52 score = 4.52 sequence = TAGGGACTTCTGACCCTG Gene: MMAR_3406: wax-dgat acyltransferase |
|
*
Mycobacterium sp. MCS Site: position = -23 score = 4.61 sequence = AAGAGACCAACGGCCCTG Site: position = -77 score = 4.4 sequence = CAGGGTCTGAAGTCCCGA Gene: Mmcs_3408: wax-dgat acyltransferase |
Gene: Rv3087: wax-dgat acyltransferase |
Gene: MUL_3161: wax-dgat acyltransferase |
*2
Mycobacterium vanbaalenii PYR-1 Site: position = -138 score = 4.66 sequence = AAAGGTCCTAAGTCCCTG Gene: Mvan_4104: wax-dgat acyltransferase Gene: Mvan_4103: wax-dgat acyltransferase |
|
*2
Rhodococcus sp. RHA1 Gene: RHA1_ro00023: wax-dgat acyltransferase Site: position = -316 score = 5.12 sequence = TAGGGACTTTCGGCCCTA Gene: RHA1_ro05356: wax-dgat acyltransferase |
|
wax-dgat acyltransferase |
| Rv2005c |
|
Gene: MAV_2494: universal stress protein |
*
Mycobacterium bovis AF2122/97 Site: position = -70 score = 3.45 sequence = TGGGGACTAAAGCCTCAT Gene: Mb2028c: universal stress protein |
Gene: MMAR_2993: universal stress protein |
|
|
*
Mycobacterium tuberculosis H37Rv Site: position = -70 score = 3.45 sequence = TGGGGACTAAAGCCTCAT Gene: Rv2005c: universal stress protein |
*
Mycobacterium ulcerans Agy99 Site: position = -435 score = 4.63 sequence = AAAGGTCTTTGGTCCCTG Gene: MUL_2234: universal stress protein |
|
|
|
|
universal stress protein |
| Rv2004c |
*
Mycobacterium abscessus ATCC 19977 Site: position = -96 score = 3.88 sequence = AGGGGCCCGAAGTCACCG Site: position = -117 score = 4.51 sequence = CAGGGCCCTTGGTCACCG Site: position = -31 score = 3.74 sequence = TGGTGACTTCGGTCCCAC Gene: MAB_3902c: hypothetical protein |
|
Gene: Mb2027c: hypothetical protein |
Gene: MMAR_3476: hypothetical protein |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -73 score = 4.77 sequence = CAGGGACTATGGTCCTCA Site: position = -52 score = 4.46 sequence = GGGGGCCGTAGGACCCTG Gene: MSMEG_3942: hypothetical protein |
*
Mycobacterium sp. MCS Site: position = -37 score = 3.46 sequence = AAGAGTCTTTGGTCACAC Gene: Mmcs_1074: hypothetical protein |
Gene: Rv2004c: hypothetical protein |
|
*
Mycobacterium vanbaalenii PYR-1 Site: position = -74 score = 4.54 sequence = CAGGGCCAATGGTCCTCA Gene: Mvan_1384: hypothetical protein |
|
Gene: RHA1_ro00055: hypothetical protein |
*2
Saccharopolyspora erythraea NRRL 2338 Site: position = -474 score = 3.85 sequence = TCGGGCACGTGGGCCCCG Site: position = -90 score = 4.1 sequence = GGTGGCCGTTGGTCCCTG Gene: SACE_2453: hypothetical protein Gene: SACE_4388: hypothetical protein |
hypothetical protein |
| Rv2003c |
|
|
Gene: Mb2026c: hypothetical protein |
|
|
|
Gene: Rv2003c: hypothetical protein |
|
|
|
|
|
hypothetical protein |
| Rv2626c |
|
|
*
Mycobacterium bovis AF2122/97 Site: position = -89 score = 4.16 sequence = ACGGGTCAAACGACCCTA Site: position = -255 score = 3.83 sequence = CGGGGCCGATCGGCATCA Site: position = -112 score = 3.82 sequence = ACGGGTCCATCGACCCGC Gene: Mb2659c: putative signal-transduction protein with CBS domains |
|
|
|
*
Mycobacterium tuberculosis H37Rv Site: position = -89 score = 4.16 sequence = ACGGGTCAAACGACCCTA Site: position = -255 score = 3.83 sequence = CGGGGCCGATCGGCATCA Site: position = -112 score = 3.82 sequence = ACGGGTCCATCGACCCGC Gene: Rv2626c: putative signal-transduction protein with CBS domains |
|
Gene: Mvan_1401: putative signal-transduction protein with CBS domains |
Gene: nfa790: putative signal-transduction protein with CBS domains |
|
Gene: SACE_3488: putative signal-transduction protein with CBS domains |
putative signal-transduction protein with CBS domains |
| MAB_3748 |
|
|
|
|
|
|
|
|
|
|
Gene: RHA1_ro02262: probable oxidoreductase |
|
Putative luciferase-like oxidoreductase |
| usp |
|
|
|
|
|
|
|
|
|
2
Nocardia farcinica IFM 10152 Gene: nfa30400: universal stress protein Gene: nfa29970: universal stress protein |
Gene: RHA1_ro02261: universal stress protein |
|
universal stress protein |
| Mmcs_1106 |
|
|
|
|
|
Gene: Mmcs_1106: GCN5-related N-acetyltransferase |
|
|
|
|
*
Rhodococcus sp. RHA1 Site: position = -79 score = 4.29 sequence = CGAGGACCAAAGGCTCTG Gene: RHA1_ro00054: GCN5-related N-acetyltransferase |
|
GCN5-related N-acetyltransferase |
| RHA1_ro00053 |
|
|
|
|
|
|
|
|
|
|
*
Rhodococcus sp. RHA1 Site: position = -115 score = 4.29 sequence = CAGAGCCTTTGGTCCTCG Gene: RHA1_ro00053: hypothetical protein |
|
hypothetical protein |
| RHA1_ro00051 |
|
|
|
|
|
|
|
|
|
|
Gene: RHA1_ro00051: cation transporting ATPase |
|
cation transporting ATPase |
| SACE_3382 |
|
|
|
|
|
|
|
|
|
|
|
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -113 score = 3.85 sequence = CCGGGTCATAGGACTCTT Gene: SACE_3382: hypothetical protein |
hypothetical protein |
| SACE_2448 |
|
|
|
|
|
|
|
|
|
|
|
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -290 score = 3.95 sequence = AAGGGACGGTGGTCTTCG Site: position = -115 score = 4.15 sequence = GCGGGCCTATGGGCTCTG Gene: SACE_2448: hypothetical protein |
hypothetical protein |
| Mmcs_1103 |
|
|
|
|
|
Gene: Mmcs_1103: MgtE integral membrane region |
|
|
*
Mycobacterium vanbaalenii PYR-1 Site: position = -103 score = 3.93 sequence = GAAGGACCTCGGACTCTG Site: position = -126 score = 4.28 sequence = TAGGGCCGCAGGTCCCCG Gene: Mvan_1426: MgtE integral membrane region |
|
Gene: RHA1_ro00017: MgtE integral membrane region |
Gene: SACE_2450: MgtE integral membrane region |
MgtE integral membrane region |
| ctpF |
|
|
*
Mycobacterium bovis AF2122/97 Site: position = -111 score = 4.15 sequence = CTGGACCGTAGGTCCCTG Site: position = -89 score = 3.96 sequence = GGATGACTTACGGCCCTG Gene: Mb2020: cation-transporting ATPase |
|
|
Gene: Mmcs_1101: cation-transporting ATPase |
*
Mycobacterium tuberculosis H37Rv Site: position = -111 score = 4.15 sequence = CTGGACCGTAGGTCCCTG Site: position = -89 score = 3.96 sequence = GGATGACTTACGGCCCTG Gene: Rv1997: cation-transporting ATPase |
|
|
|
|
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -164 score = 3.74 sequence = GCATGACGTCGGTCCCTG Gene: SACE_2467: cation-transporting ATPase |
cation-transporting ATPase |
| fdxA |
|
|
*
Mycobacterium bovis AF2122/97 Site: position = -76 score = 4.61 sequence = TAAGGCCTTTGGTCCTTT Gene: Mb2030c: 4Fe-4S ferredoxin, iron-sulfur binding protein |
*
Mycobacterium marinum M Site: position = -74 score = 4.63 sequence = AAAGGTCTTTGGTCCCTG Gene: MMAR_2994: 4Fe-4S ferredoxin, iron-sulfur binding protein |
|
*2
Mycobacterium sp. MCS Site: position = -52 score = 4.47 sequence = TGAGGACTTTCGGCCCCA Gene: Mmcs_2719: 4Fe-4S ferredoxin, iron-sulfur binding protein Gene: Mmcs_5289: 4Fe-4S ferredoxin, iron-sulfur binding protein |
*
Mycobacterium tuberculosis H37Rv Site: position = -76 score = 4.61 sequence = TAAGGCCTTTGGTCCTTT Gene: Rv2007c: 4Fe-4S ferredoxin, iron-sulfur binding protein |
|
*
Mycobacterium vanbaalenii PYR-1 Site: position = -52 score = 4.3 sequence = AAGGGACCTTTGGCCCAC Gene: Mvan_0299: 4Fe-4S ferredoxin, iron-sulfur binding protein |
|
|
|
4Fe-4S ferredoxin, iron-sulfur binding protein |
| MAV_2507 |
|
*
Mycobacterium avium 104 Site: position = -91 score = 3.9 sequence = GAAGGTCTGTCGTCCTTG Site: position = -69 score = 4.26 sequence = TGGGGACGAAAGTCTCCT Gene: MAV_2507: universal stress protein |
|
*
Mycobacterium marinum M Site: position = -289 score = 3.42 sequence = CCGGGACCGCTGGCCTGC Site: position = -214 score = 4.58 sequence = CAGGGCCGTTTGGCCCCG Gene: MMAR_3477: universal stress protein |
|
|
|
|
|
|
|
|
universal stress protein |
| Rv0080 |
|
|
Gene: Mb0083: hypothetical protein |
|
|
|
Gene: Rv0080: hypothetical protein |
|
|
*
Nocardia farcinica IFM 10152 Site: position = -90 score = 4.24 sequence = TGAGGACCTTCGGCACTG Gene: nfa28920: hypothetical protein |
|
|
hypothetical protein |
| desA |
*
Mycobacterium abscessus ATCC 19977 Site: position = -96 score = 4.56 sequence = GAGGGACCTTCGTCACTA Gene: MAB_3354: fatty acid desaturase |
*
Mycobacterium avium 104 Site: position = -110 score = 4.98 sequence = AAGGGACTTTCGGCCCTA Gene: MAV_1793: fatty acid desaturase |
|
Gene: MMAR_3704: fatty acid desaturase |
|
|
|
Gene: MUL_3646: fatty acid desaturase |
|
|
|
|
fatty acid desaturase |
| DGAT |
|
|
|
*
Mycobacterium marinum M Site: position = -79 score = 4.12 sequence = TGAGGACCAAAGTCATTG Gene: MMAR_2649: wax-dgat acyltransferase |
Gene: MSMEG_3933: wax-dgat acyltransferase |
|
|
*
Mycobacterium ulcerans Agy99 Site: position = -64 score = 4.35 sequence = TGGGGACCAAAGTCATTG Gene: MUL_3125: wax-dgat acyltransferase |
*
Mycobacterium vanbaalenii PYR-1 Site: position = -79 score = 3.99 sequence = TAGGGCACAAAGTCACCG Gene: Mvan_4722: wax-dgat acyltransferase |
|
|
|
wax-dgat acyltransferase |
| Rv1732c |
|
|
Gene: Mb1761c: hypothetical protein |
Gene: MMAR_2937: hypothetical protein |
|
|
Gene: Rv1732c: hypothetical protein |
Gene: MUL_2197: hypothetical protein |
|
|
|
|
hypothetical protein |
| MAB_3218 |
|
Gene: MAV_2858: integral membrane protein |
Gene: Mb1892: PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
*
Mycobacterium marinum M Site: position = -158 score = 3.74 sequence = TGAGGCCGTACTGCCCCT Gene: MMAR_2738: hypothetical protein |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -51 score = 3.65 sequence = CCAGGGCGTAAGGCCCGA Gene: MSMEG_3616: integral membrane protein |
|
Gene: Rv1861: PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
*
Mycobacterium ulcerans Agy99 Site: position = -167 score = 3.74 sequence = TGAGGCCGTACTGCCCCT Gene: MUL_3016: hypothetical protein |
Gene: Mvan_3074: Transglycosylase-associated protein |
|
|
|
hypothetical protein |
| adhA |
|
Gene: MAV_2857: alcohol dehydrogenase |
Gene: Mb1893: alcohol dehydrogenase |
Gene: MMAR_2739: alcohol dehydrogenase |
Gene: MSMEG_3615: alcohol dehydrogenase |
Gene: Mmcs_1096: alcohol dehydrogenase |
Gene: Rv1862: alcohol dehydrogenase |
Gene: MUL_3015: alcohol dehydrogenase |
Gene: Mvan_3073: alcohol dehydrogenase |
*
Nocardia farcinica IFM 10152 Site: position = -343 score = 3.77 sequence = GCGAGACGATGGACCCGG Gene: nfa28910: alcohol dehydrogenase |
Gene: RHA1_ro02150: alcohol dehydrogenase |
Gene: SACE_4519: alcohol dehydrogenase |
alcohol dehydrogenase |
| MSMEG_3952 |
|
|
|
|
Gene: MSMEG_3952: hypothetical protein |
|
|
|
|
|
|
|
hypothetical protein |
| Mmcs_1080 |
|
|
|
|
|
*
Mycobacterium sp. MCS Site: position = -52 score = 4.45 sequence = GCGGGACCTTCGACCCTG Gene: Mmcs_1080: hypothetical protein |
|
|
*
Mycobacterium vanbaalenii PYR-1 Site: position = -108 score = 4.04 sequence = GAGGGCCGGCGGTCCCGG Site: position = -74 score = 3.86 sequence = CCGGGCCAACGGTCCTCT Gene: Mvan_1373: hypothetical protein |
|
*
Rhodococcus sp. RHA1 Site: position = -148 score = 4.35 sequence = CCGTGACGTTGGTCCCTT Gene: RHA1_ro08739: hypothetical protein |
|
hypothetical protein |
| MAV_4008 |
|
Gene: MAV_4008: hypothetical protein |
|
Gene: MMAR_1520: hypothetical protein |
|
Gene: Mmcs_5291: hypothetical protein |
|
Gene: MUL_2419: hypothetical protein |
|
|
Gene: RHA1_ro08287: hypothetical protein |
|
hypothetical protein |
| acrA1_1 |
|
|
|
*
Mycobacterium marinum M Site: position = -101 score = 3.85 sequence = GCGGGTCGAAAGGCCCAT Gene: MMAR_5272: multi-functional enzyme with acyl-CoA-reductase activity AcrA1_1 |
|
|
|
*
Mycobacterium ulcerans Agy99 Site: position = -101 score = 3.85 sequence = GCGGGTCGAAAGGCCCAT Gene: MUL_4346: multi-functional enzyme with acyl-CoA-reductase activity AcrA1_1 |
*
Mycobacterium vanbaalenii PYR-1 Site: position = -279 score = 3.72 sequence = TACGGCCGAAAGTCCACG Gene: Mvan_4728: multi-functional enzyme with acyl-CoA-reductase activity AcrA1_1 |
|
|
|
multi-functional enzyme with acyl-CoA-reductase activity AcrA1_1 |
| DGAT |
|
Gene: MAV_0355: wax-dgat acyltransferase |
Gene: Mb3761c: wax-dgat acyltransferase |
Gene: MMAR_5271: wax-dgat acyltransferase |
|
|
Gene: Rv3734c: wax-dgat acyltransferase |
|
|
|
|
|
wax-dgat acyltransferase |
| MAB_4403c |
Gene: MAB_4403c: putative fatty acid desaturase |
|
|
|
|
|
|
|
|
*
Nocardia farcinica IFM 10152 Site: position = -169 score = 4.57 sequence = CCGGGACCTTCGTCCCAA Gene: nfa6080: putative fatty acid desaturase |
2
Rhodococcus sp. RHA1 Gene: RHA1_ro04869: putative fatty acid desaturase Gene: RHA1_ro02258: putative fatty acid desaturase |
|
putative fatty acid desaturase |
| MSMEG_3940 |
*
Mycobacterium abscessus ATCC 19977 Site: position = -108 score = 3.89 sequence = TATGGCCGAAAGTCACCA Site: position = -182 score = 3.78 sequence = CTGGGCCTTGGGTCCCAA Gene: MAB_2489: universal stress protein family protein |
|
|
|
*
Mycobacterium smegmatis str. MC2 155 Site: position = -79 score = 4.93 sequence = TCGGGACTTTCGTCCCTA Gene: MSMEG_3940: universal stress protein family protein |
|
|
|
|
|
|
|
universal stress protein family protein |
| MAB_2490 |
Gene: MAB_2490: hypothetical protein |
|
|
|
|
|
|
|
|
|
|
|
hypothetical protein |
| MSMEG_3946 |
|
|
|
|
*
Mycobacterium smegmatis str. MC2 155 Site: position = -117 score = 3.57 sequence = CAGGGGCAGAAGTCCCAT Gene: MSMEG_3946: probable conserved transmembrane protein |
|
|
|
|
|
|
|
probable conserved transmembrane protein |
| SACE_3237 |
|
|
|
|
|
|
|
|
|
|
|
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -126 score = 3.94 sequence = CCGGGTCGTTCGACTCTG Gene: SACE_3237: integral membrane protein |
integral membrane protein |
| MMAR_3425 |
|
|
|
Gene: MMAR_3425: hypothetical protein |
|
*
Mycobacterium sp. MCS Site: position = -51 score = 3.82 sequence = ACCAGACCAACGGCCCTA Gene: Mmcs_4257: hypothetical protein |
|
|
|
|
|
|
hypothetical protein |
| MMAR_3612 |
|
|
|
|
|
|
|
|
*
Mycobacterium vanbaalenii PYR-1 Site: position = -75 score = 4.27 sequence = TAGGGACTGAAGTCCTCC Gene: Mvan_1375: ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|
|
|
metal cation transporter p-type ATPase a |
| MMAR_4110 |
|
|
|
|
|
|
|
|
*
Mycobacterium vanbaalenii PYR-1 Site: position = -97 score = 3.55 sequence = CACGGACTTTAGCCTCTA Gene: Mvan_0443: iron-containing alcohol dehydrogenase |
|
|
|
aldehyde dehydrogenase |
| SACE_2426 |
|
|
|
|
|
|
|
|
|
|
|
*
Saccharopolyspora erythraea NRRL 2338 Site: position = -174 score = 3.99 sequence = AAAGGCCGTTCGCCCCTG Gene: SACE_2426: hypothetical protein |
hypothetical protein |
| SACE_2440 |
|
|
|
|
|
|
|
|
|
|
|
3
Saccharopolyspora erythraea NRRL 2338 Gene: SACE_2427: nitroreductase Gene: SACE_4518: nitroreductase Gene: SACE_2440: nitroreductase |
nitroreductase |
| Rv2623 usp |
|
|
*
Mycobacterium bovis AF2122/97 Site: position = -130 score = 3.49 sequence = TGAGGACCTAAGCCCGTT Gene: Mb2656: universal stress protein |
*
Mycobacterium marinum M Site: position = -104 score = 3.84 sequence = GAGTGACAAACGGCTCTG Gene: MMAR_2077: universal stress protein |
|
|
*
Mycobacterium tuberculosis H37Rv Site: position = -130 score = 3.49 sequence = TGAGGACCTAAGCCCGTT Gene: Rv2623: universal stress protein |
*
Mycobacterium ulcerans Agy99 Site: position = -104 score = 3.61 sequence = GAATGACAAACGGCTCTG Gene: MUL_3267: universal stress protein |
|
|
|
|
universal stress protein |
| usp |
|
|
|
|
*
Mycobacterium smegmatis str. MC2 155 Site: position = -51 score = 4.41 sequence = TAGGGACTTTCGGCCATT Gene: MSMEG_5733: universal stress protein protein |
Gene: Mmcs_0328: universal stress protein protein |
|
|
*
Mycobacterium vanbaalenii PYR-1 Site: position = -104 score = 3.86 sequence = CGGGGCCGAAGGCCTCTA Gene: Mvan_1425: universal stress protein protein |
|
|
|
universal stress protein protein |
| DGAT |
|
|
Gene: Mb0919: wax-dgat acyltransferase |
|
|
|
Gene: Rv0895: wax-dgat acyltransferase |
|
|
|
*
Rhodococcus sp. RHA1 Site: position = -188 score = 4.31 sequence = CCGGGACTTTCGGCCTCG Gene: RHA1_ro08645: wax-dgat acyltransferase |
|
wax-dgat acyltransferase |
| DGAT |
|
|
Gene: Mb3115: wax-dgat acyltransferase |
*2
Mycobacterium marinum M Site: position = -146 score = 3.63 sequence = CAGGGACTTACGGCTGGC Site: position = -123 score = 4.74 sequence = AAGGGCCCTTAGGCCCTC Gene: MMAR_3403: wax-dgat acyltransferase Gene: MMAR_2598: wax-dgat acyltransferase |
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Gene: Rv3088: wax-dgat acyltransferase |
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wax-dgat acyltransferase |
| usp |
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Gene: Mmcs_0719: universal stress protein |
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Mycobacterium vanbaalenii PYR-1 Site: position = -144 score = 4.66 sequence = AGAGGACTTTGGTCCCTG Gene: Mvan_1963: universal stress protein |
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universal stress protein |
| Mvan_0168 |
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Gene: Mvan_0168: nitroreductase |
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Nocardia farcinica IFM 10152 Site: position = -44 score = 4.21 sequence = GAGGGTCCTCCGACCCTG Gene: nfa28960: nitroreductase |
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nitroreductase |
| RHA1_ro00042 |
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Rhodococcus sp. RHA1 Site: position = -69 score = 4.07 sequence = TAGGGTCTACCGTCACTT Gene: RHA1_ro00042: universal stress protein |
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universal stress protein |
| usp |
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*2
Rhodococcus sp. RHA1 Gene: RHA1_ro00021: universal stress protein Site: position = -92 score = 3.86 sequence = TGGGGACCTTCTCCCCTA Gene: RHA1_ro00050: universal stress protein |
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universal stress protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |