Regulon of DosR in Nocardia farcinica IFM 10152

Properties
Regulator type:	Transcription factor
TF locus tag:	nfa19100, nfa28950
Regulator family:	LuxR
Regulation mode:	activator
Biological process:	Dormancy
Effector:	Oxygen; Carbon monoxide; Nitric oxide
Regulog:	DosR - Actinomycetales
Statistics of regulated genes:
- Genes	10
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 299 sites [see more]

Member of regulog collections

By TF family - LuxR
By effector - Oxygen
By effector - Carbon monoxide
By effector - Nitric oxide
By pathway - Dormancy

Regulated operons
	Locus Tag	Name	Function
Position: -81 Score: 4.6 Sequence: CGAGGACTTTCGGCCCTG Locus tag: nfa19090 Name: null Funciton: hypothetical protein
	nfa19090		hypothetical protein
Position: -90 Score: 4.2 Sequence: TGAGGACCTTCGGCACTG Locus tag: nfa28920 Name: null Funciton: hypothetical protein
	nfa28920		hypothetical protein
Position: -343 Score: 3.8 Sequence: GCGAGACGATGGACCCGG Locus tag: nfa28910 Name: adhA Funciton: alcohol dehydrogenase
	nfa28910	adhA	alcohol dehydrogenase
Position: -124 Score: 4.2 Sequence: CAGGGTCGGAGGACCCTC Locus tag: nfa28950 Name: dosR Funciton: two component transcriptional regulator, DosR Locus tag: nfa28940 Name: dosS Funciton: two-component sensor histidine kinase, DosS
	nfa28950	dosR	two component transcriptional regulator, DosR
	nfa28940	dosS	two-component sensor histidine kinase, DosS
Position: -106 Score: 4.1 Sequence: GTGGGCCTTTCGGCCCCT Locus tag: nfa28970 Name: usp Funciton: universal stress protein
	nfa28970	usp	universal stress protein
Position: -188 Score: 3.5 Sequence: CCGGGGACAAAGTCCCCG Position: -96 Score: 3.4 Sequence: AAGAGTCGCCGGTCCCTT Position: -74 Score: 4.1 Sequence: CAGGGCCGGTCGGCCCGC Locus tag: nfa27670 Name: acg Funciton: nitroreductase Locus tag: nfa27660 Name: otsB1 Funciton: trehalose-6-phosphate phosphatase
	nfa27670	acg	nitroreductase
	nfa27660	otsB1	trehalose-6-phosphate phosphatase
Position: -169 Score: 4.6 Sequence: CCGGGACCTTCGTCCCAA Locus tag: nfa6080 Name: null Funciton: putative fatty acid desaturase
	nfa6080		putative fatty acid desaturase
Position: -44 Score: 4.2 Sequence: GAGGGTCCTCCGACCCTG Locus tag: nfa28960 Name: Mvan_0168 Funciton: nitroreductase
	nfa28960	Mvan_0168	nitroreductase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD