Regulon of DosR in Mycobacterium smegmatis str. MC2 155

Properties
Regulator type:	Transcription factor
TF locus tag:	MSMEG_5244, MSMEG_3944
Regulator family:	LuxR
Regulation mode:	activator
Biological process:	Dormancy
Effector:	Oxygen; Carbon monoxide; Nitric oxide
Regulog:	DosR - Actinomycetales
Statistics of regulated genes:
- Genes	33
- Operons	16
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 299 sites [see more]

Member of regulog collections

By TF family - LuxR
By effector - Oxygen
By effector - Carbon monoxide
By effector - Nitric oxide
By pathway - Dormancy

Regulated operons
	Locus Tag	Name	Function
Position: -51 Score: 4.6 Sequence: TGAGGACCAAAGACCCTA Locus tag: MSMEG_5246 Name: acg Funciton: nitroreductase Locus tag: MSMEG_5245 Name: usp Funciton: universal stress protein Locus tag: MSMEG_5244 Name: dosR Funciton: two component transcriptional regulator, DosR Locus tag: MSMEG_5243 Name: MAV_4110 Funciton: hypothetical protein Locus tag: MSMEG_5242 Name: MSMEG_5242 Funciton: acyltransferase, ws/dgat/mgat subfamily protein Locus tag: MSMEG_5241 Name: dosT Funciton: two-component system sensor kinase, DosT
	MSMEG_5246	acg	nitroreductase
	MSMEG_5245	usp	universal stress protein
	MSMEG_5244	dosR	two component transcriptional regulator, DosR
	MSMEG_5243	MAV_4110	hypothetical protein
	MSMEG_5242	MSMEG_5242	acyltransferase, ws/dgat/mgat subfamily protein
	MSMEG_5241	dosT	two-component system sensor kinase, DosT
Position: -81 Score: 4.3 Sequence: AGGTGACTTTCGGCCCTG Locus tag: MSMEG_3935 Name: null Funciton: hypothetical protein Locus tag: MSMEG_3933 Name: DGAT Funciton: wax-dgat acyltransferase
	MSMEG_3935		hypothetical protein
	MSMEG_3933	DGAT	wax-dgat acyltransferase
Position: -81 Score: 4.4 Sequence: CAGGGCCGTTGGTCACCG Locus tag: MSMEG_3954 Name: otsB1 Funciton: trehalose-6-phosphate phosphatase
	MSMEG_3954	otsB1	trehalose-6-phosphate phosphatase
Position: -60 Score: 3.6 Sequence: ATGGGACTTCTGCCCCTG Locus tag: MSMEG_3948 Name: DGAT Funciton: wax-dgat acyltransferase
	MSMEG_3948	DGAT	wax-dgat acyltransferase
Position: -125 Score: 4.5 Sequence: CAGGGTCCTACGGCCCCC Position: -104 Score: 4.8 Sequence: TGAGGACCATAGTCCCTG Locus tag: MSMEG_3943 Name: acg Funciton: nitroreductase Locus tag: MSMEG_3944 Name: dosR Funciton: two component transcriptional regulator, DosR
	MSMEG_3943	acg	nitroreductase
	MSMEG_3944	dosR	two component transcriptional regulator, DosR
Position: -51 Score: 3.7 Sequence: CCAGGGCGTAAGGCCCGA Locus tag: MSMEG_3616 Name: null Funciton: integral membrane protein Locus tag: MSMEG_3615 Name: adhA Funciton: alcohol dehydrogenase
	MSMEG_3616		integral membrane protein
	MSMEG_3615	adhA	alcohol dehydrogenase
Position: -51 Score: 4.4 Sequence: CGGTGACCAACGGCCCTG Locus tag: MSMEG_3953 Name: null Funciton: 3-oxoacyl-(acyl-carrier protein) synthase Locus tag: MSMEG_3951 Name: null Funciton: 3-oxoacyl-[acyl-carrier-protein] synthase III
	MSMEG_3953		3-oxoacyl-(acyl-carrier protein) synthase
	MSMEG_3951		3-oxoacyl-[acyl-carrier-protein] synthase III
Position: -150 Score: 4.1 Sequence: AAGGGACCGAAGTCCACG Position: -79 Score: 4.3 Sequence: CCGGGACTTAGGTCACCA Locus tag: MSMEG_3939 Name: usp Funciton: universal stress protein
	MSMEG_3939	usp	universal stress protein
Position: -145 Score: 4.4 Sequence: TAGGGACGAAAGTCTCAA Position: -51 Score: 3.6 Sequence: GTGCGACTTCGGTCCCTA Locus tag: MSMEG_3947 Name: pfkB Funciton: probable phosphofructokinase
	MSMEG_3947	pfkB	probable phosphofructokinase
Position: -324 Score: 4 Sequence: GAAGGCCTTAGGTCACCT Position: -105 Score: 3.9 Sequence: CAGGGACGAAAGTTCGTG Position: -84 Score: 4.6 Sequence: ACGGGACTTCGGTCCCTA Locus tag: MSMEG_3932 Name: hspX Funciton: heat shock protein HspX_1 Locus tag: MSMEG_3931 Name: MSMEG_3931 Funciton: 4Fe-4S ferredoxin, iron-sulfur binding protein Locus tag: MSMEG_3930 Name: null Funciton: flavodoxin oxidoreductase Locus tag: MSMEG_3929 Name: null Funciton: NADH ubiquinone oxidoreductase, 20 kDa subunit Locus tag: MSMEG_3928 Name: null Funciton: oxidoreductase Locus tag: MSMEG_3927 Name: null Funciton: hypothetical protein Locus tag: MSMEG_3926 Name: MSMEG_3926 Funciton: cation transportind ATPase
	MSMEG_3932	hspX	heat shock protein HspX_1
	MSMEG_3931	MSMEG_3931	4Fe-4S ferredoxin, iron-sulfur binding protein
	MSMEG_3930		flavodoxin oxidoreductase
	MSMEG_3929		NADH ubiquinone oxidoreductase, 20 kDa subunit
	MSMEG_3928		oxidoreductase
	MSMEG_3927		hypothetical protein
	MSMEG_3926	MSMEG_3926	cation transportind ATPase
Position: -73 Score: 4.8 Sequence: CAGGGACTATGGTCCTCA Position: -52 Score: 4.5 Sequence: GGGGGCCGTAGGACCCTG Locus tag: MSMEG_3942 Name: Rv2004c Funciton: hypothetical protein
	MSMEG_3942	Rv2004c	hypothetical protein
Position: -80 Score: 4.7 Sequence: AAAGGACCAAAGGCCCTT Locus tag: MSMEG_3950 Name: usp Funciton: universal stress protein Locus tag: MSMEG_3952 Name: null Funciton: hypothetical protein
	MSMEG_3950	usp	universal stress protein
	MSMEG_3952		hypothetical protein
Position: -88 Score: 4.4 Sequence: TTGAGACTTTCGTCCCTA Locus tag: MSMEG_3949 Name: MAV_3502 Funciton: hypothetical protein
	MSMEG_3949	MAV_3502	hypothetical protein
Position: -51 Score: 4.4 Sequence: TAGGGACTTTCGGCCATT Locus tag: MSMEG_5733 Name: usp Funciton: universal stress protein protein
	MSMEG_5733	usp	universal stress protein protein
Position: -79 Score: 4.9 Sequence: TCGGGACTTTCGTCCCTA Locus tag: MSMEG_3940 Name: MSMEG_3940 Funciton: universal stress protein family protein
	MSMEG_3940	MSMEG_3940	universal stress protein family protein
Position: -117 Score: 3.6 Sequence: CAGGGGCAGAAGTCCCAT Locus tag: MSMEG_3946 Name: null Funciton: probable conserved transmembrane protein Locus tag: MSMEG_3945 Name: Rv1996 Funciton: universal stress protein
	MSMEG_3946		probable conserved transmembrane protein
	MSMEG_3945	Rv1996	universal stress protein

Export
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of DosR in Mycobacterium smegmatis str. MC2 155

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --