Regulon of DosR in Rhodococcus sp. RHA1

Properties
Regulator type:	Transcription factor
TF locus tag:	RHA1_ro00048, RHA1_ro02256
Regulator family:	LuxR
Regulation mode:	activator
Biological process:	Dormancy
Effector:	Oxygen; Carbon monoxide; Nitric oxide
Regulog:	DosR - Actinomycetales
Statistics of regulated genes:
- Genes	35
- Operons	18
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 299 sites [see more]

Member of regulog collections

By TF family - LuxR
By effector - Oxygen
By effector - Carbon monoxide
By effector - Nitric oxide
By pathway - Dormancy

Regulated operons
	Locus Tag	Name	Function
Position: -90 Score: 4.7 Sequence: TAGGGCCGATGGTCACTG Position: -52 Score: 4.3 Sequence: TCGGGCCGGAAGACCCTA Locus tag: RHA1_ro00030 Name: null Funciton: ABC transporter, ATP-binding protein Locus tag: RHA1_ro00029 Name: null Funciton: probable ABC transporter, permease component Locus tag: RHA1_ro00028 Name: usp Funciton: universal stress protein
	RHA1_ro00030		ABC transporter, ATP-binding protein
	RHA1_ro00029		probable ABC transporter, permease component
	RHA1_ro00028	usp	universal stress protein
Position: -127 Score: 4.3 Sequence: CAGGGCATTTGGACCCTT Position: -68 Score: 4.3 Sequence: TGAGGTCCTAGGACCCTT Locus tag: RHA1_ro00059 Name: null Funciton: probable IMP dehydrogenase Locus tag: RHA1_ro00060 Name: null Funciton: hypothetical protein Locus tag: RHA1_ro00061 Name: Rv1996 Funciton: universal stress protein
	RHA1_ro00059		probable IMP dehydrogenase
	RHA1_ro00060		hypothetical protein
	RHA1_ro00061	Rv1996	universal stress protein
Position: -137 Score: 4.3 Sequence: CGATGACCTTGGGCCCTA Locus tag: RHA1_ro00025 Name: null Funciton: hypothetical protein Locus tag: RHA1_ro00024 Name: DGAT Funciton: wax-dgat acyltransferase Locus tag: RHA1_ro00023 Name: DGAT Funciton: wax-dgat acyltransferase
	RHA1_ro00025		hypothetical protein
	RHA1_ro00024	DGAT	wax-dgat acyltransferase
	RHA1_ro00023	DGAT	wax-dgat acyltransferase
Position: -96 Score: 3.8 Sequence: AGGGGCACGAAGTCCCGA Locus tag: RHA1_ro03145 Name: null Funciton: hypothetical protein Locus tag: RHA1_ro03146 Name: null Funciton: metal cation transporting ATPase, P-type ATPase superfamily
	RHA1_ro03145		hypothetical protein
	RHA1_ro03146		metal cation transporting ATPase, P-type ATPase superfamily
Position: -316 Score: 5.1 Sequence: TAGGGACTTTCGGCCCTA Locus tag: RHA1_ro05356 Name: DGAT Funciton: wax-dgat acyltransferase
	RHA1_ro05356	DGAT	wax-dgat acyltransferase
Position: -188 Score: 4.3 Sequence: CCGGGACTTTCGGCCTCG Locus tag: RHA1_ro08645 Name: DGAT Funciton: wax-dgat acyltransferase
	RHA1_ro08645	DGAT	wax-dgat acyltransferase
Position: -489 Score: 4.4 Sequence: TGGTGACTTTCGGCCCTG Locus tag: RHA1_ro00048 Name: dosR Funciton: two component transcriptional regulator, DosR Locus tag: RHA1_ro00049 Name: dosS Funciton: two-component sensor histidine kinase, DosS
	RHA1_ro00048	dosR	two component transcriptional regulator, DosR
	RHA1_ro00049	dosS	two-component sensor histidine kinase, DosS
Position: -110 Score: 4.3 Sequence: CGATGACCTACGGCCCTA Locus tag: RHA1_ro00027 Name: acg Funciton: nitroreductase Locus tag: RHA1_ro00026 Name: Rv1996 Funciton: universal stress protein
	RHA1_ro00027	acg	nitroreductase
	RHA1_ro00026	Rv1996	universal stress protein
Position: -89 Score: 4.4 Sequence: TCGGGACCTTCGACCCAA Locus tag: RHA1_ro02257 Name: Rv3131 Funciton: nitroreductase Locus tag: RHA1_ro02258 Name: null Funciton: putative fatty acid desaturase
	RHA1_ro02257	Rv3131	nitroreductase
	RHA1_ro02258		putative fatty acid desaturase
Position: -73 Score: 4.8 Sequence: TGGGGACTTAAGTCCCTC Locus tag: RHA1_ro02263 Name: usp Funciton: universal stress protein Locus tag: RHA1_ro02262 Name: null Funciton: probable oxidoreductase Locus tag: RHA1_ro02261 Name: usp Funciton: universal stress protein
	RHA1_ro02263	usp	universal stress protein
	RHA1_ro02262		probable oxidoreductase
	RHA1_ro02261	usp	universal stress protein
Position: -148 Score: 4.3 Sequence: CCGTGACGTTGGTCCCTT Locus tag: RHA1_ro08739 Name: Mmcs_1080 Funciton: hypothetical protein
	RHA1_ro08739	Mmcs_1080	hypothetical protein
Position: -79 Score: 4.3 Sequence: CGAGGACCAAAGGCTCTG Locus tag: RHA1_ro00054 Name: Mmcs_1106 Funciton: GCN5-related N-acetyltransferase Locus tag: RHA1_ro00055 Name: Rv2004c Funciton: hypothetical protein Locus tag: RHA1_ro00056 Name: pfkB Funciton: probable phosphofructokinase
	RHA1_ro00054	Mmcs_1106	GCN5-related N-acetyltransferase
	RHA1_ro00055	Rv2004c	hypothetical protein
	RHA1_ro00056	pfkB	probable phosphofructokinase
Position: -123 Score: 4.3 Sequence: TAGGGTCTTCCGGCCCGA Position: -85 Score: 4.7 Sequence: CAGTGACCATCGGCCCTA Locus tag: RHA1_ro00031 Name: nitroreductase Funciton: nitroreductase
	RHA1_ro00031	nitroreductase	nitroreductase
Position: -115 Score: 4.3 Sequence: CAGAGCCTTTGGTCCTCG Locus tag: RHA1_ro00053 Name: null Funciton: hypothetical protein Locus tag: RHA1_ro00052 Name: MMAR_3503 Funciton: metal cation transporter p-type ATPase Locus tag: RHA1_ro00051 Name: null Funciton: cation transporting ATPase
	RHA1_ro00053		hypothetical protein
	RHA1_ro00052	MMAR_3503	metal cation transporter p-type ATPase
	RHA1_ro00051		cation transporting ATPase
Position: -176 Score: 4.3 Sequence: AAGGGTCCTAGGACCTCA Position: -117 Score: 4.3 Sequence: AAGGGTCCAAATGCCCTG Locus tag: RHA1_ro00058 Name: null Funciton: 3-oxoacyl-(acyl-carrier protein) synthase Locus tag: RHA1_ro00057 Name: null Funciton: 3-oxoacyl-[acyl-carrier-protein] synthase III
	RHA1_ro00058		3-oxoacyl-(acyl-carrier protein) synthase
	RHA1_ro00057		3-oxoacyl-[acyl-carrier-protein] synthase III
Position: -101 Score: 4.4 Sequence: TTGGGTCGAAGGTCCCGA Locus tag: RHA1_ro02256 Name: dosR Funciton: two component transcriptional regulator, DosR
	RHA1_ro02256	dosR	two component transcriptional regulator, DosR
Position: -69 Score: 4.1 Sequence: TAGGGTCTACCGTCACTT Locus tag: RHA1_ro00042 Name: RHA1_ro00042 Funciton: universal stress protein
	RHA1_ro00042	RHA1_ro00042	universal stress protein
Position: -92 Score: 3.9 Sequence: TGGGGACCTTCTCCCCTA Locus tag: RHA1_ro00050 Name: usp Funciton: universal stress protein
	RHA1_ro00050	usp	universal stress protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of DosR in Rhodococcus sp. RHA1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --