Regulon of DosR in Mycobacterium avium 104
| Regulator type: | Transcription factor |
| TF locus tag: | MAV_4109 |
| Regulator family: | LuxR |
| Regulation mode: | activator |
| Biological process: | Dormancy |
| Effector: | Oxygen; Carbon monoxide; Nitric oxide |
| Regulog: | DosR - Actinomycetales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By TF family - LuxR
- By effector - Oxygen
- By effector - Carbon monoxide
- By effector - Nitric oxide
- By pathway - Dormancy
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -138
Score: 4 Sequence: CAACGACTTTGGTCCCGA
Locus tag: MAV_4110
Name: MAV_4110 Funciton: hypothetical protein |
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MAV_4110
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hypothetical protein
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Position: -105
Score: 3.8 Sequence: ATCGGCCGAAAGTCCCTC
Position: -83
Score: 4.2 Sequence: TAGAGCCGTCGGGCCCTC
Locus tag: MAV_4111
Name: usp Funciton: universal stress protein |
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usp
|
universal stress protein
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Position: -110
Score: 5 Sequence: AAGGGACTTTCGGCCCTA
Locus tag: MAV_1793
Name: desA Funciton: fatty acid desaturase |
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desA
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fatty acid desaturase
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Position: -122
Score: 4 Sequence: TAGGGTCTTATGGCACCT
Position: -101
Score: 3.9 Sequence: TGGGGACCAACGCCTCTG
Locus tag: MAV_4010
Name: Rv3134c Funciton: universal stress protein
Locus tag: MAV_4008
Name: null Funciton: hypothetical protein |
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Rv3134c
|
universal stress protein
|
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hypothetical protein
|
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Position: -115
Score: 3.6 Sequence: GGCGGCCGAAGGTCCTCT
Position: -93
Score: 4 Sequence: TCGGGACCAAAGTCGTTG
Locus tag: MAV_4109
Name: dosR Funciton: two component transcriptional regulator, DosR
Locus tag: MAV_4108
Name: dosS Funciton: two-component sensor histidine kinase, DosS |
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dosR
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two component transcriptional regulator, DosR
|
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dosS
|
two-component sensor histidine kinase, DosS
|
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Position: -91
Score: 3.9 Sequence: GAAGGTCTGTCGTCCTTG
Position: -69
Score: 4.3 Sequence: TGGGGACGAAAGTCTCCT
Locus tag: MAV_2507
Name: MAV_2507 Funciton: universal stress protein
Locus tag: MAV_2508
Name: dosS Funciton: two-component sensor histidine kinase, DosS |
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MAV_2507
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universal stress protein
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dosS
|
two-component sensor histidine kinase, DosS
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Position: -81
Score: 4.7 Sequence: ACGGGACCTAGGACCCTA
Locus tag: MAV_2505
Name: MAV_2505 Funciton: nitroreductase
Locus tag: MAV_2506
Name: usp Funciton: universal stress protein |
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MAV_2505
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nitroreductase
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usp
|
universal stress protein
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Position: -102
Score: 3.9 Sequence: TACGGCACAAAGTCCCTC
Position: -80
Score: 3.4 Sequence: CAGGGGACGTCGTCCCCT
Locus tag: MAV_2502
Name: Rv3131 Funciton: nitroreductase |
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Rv3131
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nitroreductase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |