Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing usp gene

Properties
Regulog: DosR - Actinomycetales
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator
Biological process: Dormancy
Effector: Oxygen; Carbon monoxide; Nitric oxide
Phylum: Actinobacteria
Built upon 299 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Mycobacterium avium 104
Position: -81
Score: 4.73
Sequence: ACGGGACCTAGGACCCTA
Locus tag: MAV_2505
Name: MAV_2505
Funciton: nitroreductase
Locus tag: MAV_2506
Name: usp
Funciton: universal stress protein
MAV_2505-usp -81 4.7 ACGGGACCTAGGACCCTA MAV_2505
Mycobacterium marinum M
Position: -106
Score: 4.58
Sequence: CGGGGCCAAACGGCCCTG
Position: -31
Score: 3.42
Sequence: GCAGGCCAGCGGTCCCGG
Locus tag: MMAR_3478
Name: usp
Funciton: universal stress protein
usp -106 4.6 CGGGGCCAAACGGCCCTG MMAR_3478
-31 3.4 GCAGGCCAGCGGTCCCGG
Mycobacterium smegmatis str. MC2 155
Position: -150
Score: 4.05
Sequence: AAGGGACCGAAGTCCACG
Position: -79
Score: 4.34
Sequence: CCGGGACTTAGGTCACCA
Locus tag: MSMEG_3939
Name: usp
Funciton: universal stress protein
usp -150 4.1 AAGGGACCGAAGTCCACG MSMEG_3939
-79 4.3 CCGGGACTTAGGTCACCA
Mycobacterium sp. MCS
Position: -37
Score: 3.46
Sequence: AAGAGTCTTTGGTCACAC
Locus tag: Mmcs_1074
Name: Rv2004c
Funciton: hypothetical protein
Locus tag: Mmcs_1073
Name: Mmcs_1073
Funciton: alcohol dehydrogenase GroES-like protein
Locus tag: Mmcs_1072
Name: usp
Funciton: universal stress protein
Rv2004c-Mmcs_1073-usp -37 3.5 AAGAGTCTTTGGTCACAC Mmcs_1074
Mycobacterium vanbaalenii PYR-1
Position: -72
Score: 4.54
Sequence: TGAGGACCATTGGCCCTG
Locus tag: Mvan_2550
Name: nitroreductase
Funciton: nitroreductase
Locus tag: Mvan_2549
Name: usp
Funciton: universal stress protein
Locus tag: Mvan_2548
Name: dosR
Funciton: two component transcriptional regulator, DosR
nitroreductase-usp-dosR -72 4.5 TGAGGACCATTGGCCCTG Mvan_2550
Nocardia farcinica IFM 10152
Position: -106
Score: 4.07
Sequence: GTGGGCCTTTCGGCCCCT
Locus tag: nfa28970
Name: usp
Funciton: universal stress protein
usp -106 4.1 GTGGGCCTTTCGGCCCCT nfa28970
Saccharopolyspora erythraea NRRL 2338
Position: -164
Score: 3.74
Sequence: GCATGACGTCGGTCCCTG
Locus tag: SACE_2467
Name: ctpF
Funciton: cation-transporting ATPase
Locus tag: SACE_2466
Name: usp
Funciton: universal stress protein
Locus tag: SACE_2465
Name: usp
Funciton: universal stress protein
ctpF-usp-usp -164 3.7 GCATGACGTCGGTCCCTG SACE_2467