Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Yersinia pestis FV-1

Type Regulator Effector Pathway Genes Sites
TF AcrR Rhodamine 6G; Ethidium bromide; Proflavin Multidrug resistance 2 2
TF AraC Arabinose Arabinose utilization 1 2
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 5 11
TF BetI Choline Glycine betaine synthesis 2 2
TF Crp Cyclic 3',5'-AMP Carbon catabolism 140 337
TF CueR Copper ion, (Cu+) Copper resistance 3 3
TF DeoR Deoxyribonucleoside utilization 1 2
TF ExuR Galacturonate Galacturonate utilization 3 5
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 1 1
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 6 6
TF Fnr Oxygen Energy metabolism; Anaerobic metabolism 61 113
TF FruR Fructose-1-phosphate; Fructose-1,6-diphosphate Central carbohydrate metabolism 8 10
TF Fur Iron ion, (Fe2+) Iron homeostasis 40 141
TF GalR/GalS Galactose Galactose utilization 3 3
TF GlpR Glycerol 3-phosphate Glycerol utilization 2 2
TF GntR Gluconate Gluconate utilization 2 4
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 4 6
TF HutC cis-Urocanic acid Histidine utilization 4 4
TF IlvY 2-Acetolactate Branched-chain amino acid biosynthesis 2 4
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 1
TF KdgR 2-keto-3-deoxygluconate Pectin and polygalacturonate utlization 11 17
TF LeuO Guanosine 3',5'-bis(diphosphate) 1 2
TF LexA DNA damage SOS response 8 11
TF LfaR Sugar utilization 1 1
TF LsrR 4,5-dihydroxypentan-2,3-dione Quorum sensing; Biofilm formation 1 1
TF LysR LL-2,6-Diaminopimelate Lysine biosynthesis 2 2
TF MetR Homocysteine Methionine biosynthesis 2 4
TF ModE Molybdate Molybdopterin biosynthesis; Molybdenum homeostasis 2 2
TF MprA 2,4-Dinitrophenol; Carbonyl cyanide m-chlorophenylhydrazone Multidrug resistance 2 2
TF NagC N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 3 3
TF NarP Nitrate; Nitrite Nitrate and nitrite respiration 7 9
TF NrdR Deoxyribonucleotides Ribonucleotide reductases 4 7
TF NsrR Nitric oxide Nitrosative stress response 4 7
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 4 7
TF PdhR Pyruvate Pyruvate metabolism 2 3
TF PhnF Phosphonate utilization 1 1
TF PurR Hypoxanthine; Guanine Purine metabolism 9 11
TF QorR Energy metabolism 2 2
TF SiaR Glucosamine-6-phosphate Sialic acid utilization 2 2
TF TreR Trehalose-6-phosphate Trehalose utilization 1 1
TF TrpR Tryptophan Tryptophan biosynthesis 2 2
TF TyrR Tyrosine; Phenylalanine Aromatic amino acid metabolism 5 8
TF UxuR Glucuronate Glucuronate utilization 5 6
TF ZntR Zinc ion, (Zn2+) Zinc resistance 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 1 1
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