Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NsrR regulog to Yersinia pestis FV-1

Reference regulog properties
Source regulog: NsrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis FV-1
Orthologous TF(s) YpesF_010100020045
Regulated genes 4
Built upon 73 sites [see more]
Predicted regulatory interactions in Yersinia pestis FV-1
Locus tag Position Score Sequence
Position: -44
Score: 5.9
Sequence: GTTGCATATAAAATGCATC
Locus tag: YpesF_010100001295
YpesF_010100001295 -44 5.9 GTTGCATATAAAATGCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: tehB
Ortholog function: Tellurite resistance protein TehB
Yersinia pestis KIM y2361 -44 5.9 GTTGCATATAAAATGCATC
Serratia proteamaculans 568 Spro_0987 -63 5.5 CATGTATTTTATATGCAAC
Position: -77
Score: 5.1
Sequence: CATGCATTTATTATGCATG
Locus tag: YpesF_010100024812
YpesF_010100024812 -77 5.1 CATGCATTTATTATGCATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnrN
Ortholog function: Nitric oxide-dependent regulator DnrN or NorA
Escherichia coli str. K-12 substr. MG1655 b4209 -47 6.4 GATGCATTTAAAATACATC
Salmonella typhimurium LT2 STM4399 -47 6.4 GATGCATTTAAAATACAAC
Citrobacter koseri ATCC BAA-895 CKO_03623 -47 6.2 GATGTATTTAAAATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04602 -47 6.4 GATGCATTTAAAATACATC
Enterobacter sp. 638 Ent638_0379 -48 5.8 GATGCATTTAATATGCACC
Yersinia pestis KIM y0652 -77 5.1 CATGCATTTATTATGCATG
-53 4.8 GGTGTATAATAAATACATG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3606 -50 6 GATGCATTTAAAATGCAAT
Edwardsiella tarda EIB202 ETAE_0372 -47 5.7 ATTGCATTTAAAATACACC