Propagation of LexA regulog to Yersinia pestis FV-1

Reference regulog properties
Source regulog:	LexA - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Yersinia pestis FV-1
Orthologous TF(s)	YpesF_010100004425
Regulated genes	8

Built upon 265 sites [see more]

Predicted regulatory interactions in *Yersinia pestis FV-1*
	Locus tag	Position	Score	Sequence
Position: -47 Score: 5 Sequence: AGCTGTATATACTCACAGCA Position: -26 Score: 5.4 Sequence: AACTGTATAAACAAACAGGG Locus tag: YpesF_010100004425
	YpesF_010100004425	-47	5	AGCTGTATATACTCACAGCA
		-26	5.4	AACTGTATAAACAAACAGGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88)
Escherichia coli str. K-12 substr. MG1655	b4043	-47	5.1	TGCTGTATATACTCACAGCA
		-26	5.2	AACTGTATATACACCCAGGG
Salmonella typhimurium LT2	STM4237	-47	5.2	AACTGTATATACTCACAGCA
		-26	4.4	GATTGTATATACACCCAGGG
Citrobacter koseri ATCC BAA-895	CKO_03872	-47	5	AGCTGTATATACTCACAGCA
		-26	5.2	AACTGTATATACACCCAGGG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04431	-47	5	AGCTGTATATACTCACAGCA
		-26	5.2	AACTGTATATACACCCAGGG
Enterobacter sp. 638	Ent638_0247	-47	5	GACTGTATATACTCACAGCA
		-26	5.2	AACTGTATATACACCCAGGG
Erwinia amylovora ATCC 49946	EAM_0264	-46	4.9	ACCTGTATATACTCACAGTC
		-26	5	GACTGTATAAACAACCAGGG
Yersinia pestis KIM	y0572	-47	5	AGCTGTATATACTCACAGCA
		-26	5.4	AACTGTATAAACAAACAGGG
Serratia proteamaculans 568	Spro_4460	-47	5	ACCTGTATATACTCACAGCA
		-26	5.2	GACTGTATAAACAAACAGGG
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0630	-47	5	ACCTGTATATACTCACAGCA
		-26	5	GACTGTATAAACAACCAGGG
Edwardsiella tarda EIB202	ETAE_0230	-47	5	ACCTGTATATACTCACAGCA
		-26	5	AACTGTATAAACGAACAGGG
Proteus mirabilis HI4320	PMI2749	-47	4.9	ACCTGTATATACTCACAGTC
		-26	5.2	GACTGTATAAACAAACAGGG
Photorhabdus luminescens subsp. laumondii TTO1	plu4374	-26	5.2	GACTGTATAAACAAACAGGG

Position: -41 Score: 5.3 Sequence: GACTGTATACTTATACAGCT Locus tag: YpesF_010100004590
	YpesF_010100004590	-41	5.3	GACTGTATACTTATACAGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dinB
Ortholog function: DNA polymerase IV (EC 2.7.7.7)
Escherichia coli str. K-12 substr. MG1655	b0231	-34	4.8	CACTGTATACTTTACCAGTG
Salmonella typhimurium LT2	STM0313	-35	5.4	TACTGTACACTTAAACAGTA
Citrobacter koseri ATCC BAA-895	CKO_02960	-35	5.8	TACTGTATACTTAAACAGTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00247	1	5.2	TGCTGTATGGGTATACAGTG
Enterobacter sp. 638	Ent638_0762	-37	5.8	TACTGTATACTTATCCAGTA
Erwinia amylovora ATCC 49946	EAM_0894	-36	5.4	GACTGTATACTTATCCAGTA
Yersinia pestis KIM	y0959	-41	5.3	GACTGTATACTTATACAGCT
Serratia proteamaculans 568	Spro_0962	-35	5.7	GCCTGTATATTTATACAGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3468	-36	5.5	ATCTGTATATTCATACAGTA
Edwardsiella tarda EIB202	ETAE_0788	-42	5.6	TGCTGTATACTCATACAGTA
Proteus mirabilis HI4320	PMI0362	-39	6.1	TACTGTATATTTAAACAGTA
Photorhabdus luminescens subsp. laumondii TTO1	plu1239	-42	4.8	TTATGTATGTTTATACAGTT

Position: -47 Score: 5.2 Sequence: CACTGTGATTATATACAGTT Locus tag: YpesF_010100005979
	YpesF_010100005979	-47	5.2	CACTGTGATTATATACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yebG
Ortholog function: SOS regulon DNA damage-inducible protein
Escherichia coli str. K-12 substr. MG1655	b1848	-37	5.3	TACTGTATAAAATCACAGTT
Salmonella typhimurium LT2	STM1882	-37	5.5	TACTGTATATAAACACAGGT
Citrobacter koseri ATCC BAA-895	CKO_01118	-38	4.8	TGCTGTACATAATTACAGGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02363	-35	5.9	TACTGTATAAAAATACAGTG
Enterobacter sp. 638	Ent638_1887	-33	5.3	CACTGTATATAATTACAGTG
Erwinia amylovora ATCC 49946	EAM_1993	-35	5.7	TACTGTATAAAAACACAGTT
Yersinia pestis KIM	y2530	-47	5.2	CACTGTGATTATATACAGTT
Serratia proteamaculans 568	Spro_2803	-44	6.1	TACTGTATAAAAATACAGTA
Edwardsiella tarda EIB202	ETAE_1833	-31	5.8	TACTGTATATAAAAACAGTG

Position: -102 Score: 5.6 Sequence: TACTGTATGATTGTACAGTA Locus tag: YpesF_010100007064
	YpesF_010100007064	-102	5.6	TACTGTATGATTGTACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Escherichia coli str. K-12 substr. MG1655	b2699	-79	5.7	TACTGTATGAGCATACAGTA
Salmonella typhimurium LT2	STM2829	-84	5.7	TACTGTATGAGCATACAGTA
Citrobacter koseri ATCC BAA-895	CKO_04050	-96	5.5	TACTGTATGACTGTACAGTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03031	-90	5.8	TACTGTATGACCATACAGTA
Enterobacter sp. 638	Ent638_3174	-92	5.9	TACTGTATGACTATACAGTA
Erwinia amylovora ATCC 49946	EAM_2640	-88	6.1	TACTGTATGATTATACAGTA
Yersinia pestis KIM	y0881	-102	5.6	TACTGTATGATTGTACAGTA
Serratia proteamaculans 568	Spro_0841	-100	5.8	TACTGTATGACCATACAGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3369	-101	5.7	TGCTGTATGTGTATACAGTA
Edwardsiella tarda EIB202	ETAE_2861	-63	5.7	TACTGTATGAGCATACAGTA
Proteus mirabilis HI4320	PMI0375	-102	6.1	TACTGTATGATTATACAGTA
Photorhabdus luminescens subsp. laumondii TTO1	plu1249	-100	5.8	TGCTGTATGATTATACAGTA

Position: -39 Score: 5 Sequence: TACTGGATAAATCAACAGCT Locus tag: YpesF_010100007139
	YpesF_010100007139	-39	5	TACTGGATAAATCAACAGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydjM
Ortholog function: membrane-bound metal-dependent hydrolase
Escherichia coli str. K-12 substr. MG1655	b1728	-52	4.4	CACTGTATAAAAATCCTATA
		-34	4.7	TACTGTACGTATCGACAGTT
Salmonella typhimurium LT2	STM1321	-52	4.4	TACTGTATAAAAACCCTATA
		-34	5.2	TACTGTATGAATTGACAGTT
Citrobacter koseri ATCC BAA-895	CKO_01754	-52	4.4	TACTGTATAAAAACCCTATA
		-34	5.2	TACTGTATGAATTGACAGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01239	-34	5	TACTGTATGAATCGACAGTT
Enterobacter sp. 638	Ent638_1715	-34	5.2	TACTGTATGAATTGACAGTT
Erwinia amylovora ATCC 49946	EAM_1619	-56	4.3	TACTGTATATATTCCCTATA
		-38	4.8	TACTGGATGCATTGACAGTT
Yersinia pestis KIM	y1879	-39	5	TACTGGATAAATCAACAGCT
Serratia proteamaculans 568	Spro_2124	-39	5.4	TACTGGATAAATTAACAGTT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2409	-36	5.4	TACTGTATAAAATAACAGTT
Edwardsiella tarda EIB202	ETAE_1569	-109	5.5	TTCTGTATATTTATACAGCA
Proteus mirabilis HI4320	PMI1020	-54	5.2	CACTGTATAAATGAACAGCA
Photorhabdus luminescens subsp. laumondii TTO1	plu2679	-37	5	GACTGTATGGATAGACAGTT

Position: -88 Score: 4.7 Sequence: CCCTGTGTAAATCTACAGTG Locus tag: YpesF_010100013174
	YpesF_010100013174	-88	4.7	CCCTGTGTAAATCTACAGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrD
Ortholog function: ATP-dependent DNA helicase II
Escherichia coli str. K-12 substr. MG1655	b3813	-76	4.9	ATCTGTATATATACCCAGCT
Salmonella typhimurium LT2	STM3951	-125	4.8	TTCTGTATAAATTCCCAGTT
Citrobacter koseri ATCC BAA-895	CKO_00155	-76	5	TATTGTATATATACCCAGCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04312	-53	4.6	CTCTGTATATATTAACAGGG
Enterobacter sp. 638	Ent638_3979	-68	5.1	TATTGTATAAATCAACAGTA
Erwinia amylovora ATCC 49946	EAM_0187	-55	5	ACCTGGTTATTTAACCAGTG
Yersinia pestis KIM	y0389	-82	4.7	CCCTGTGTAAATCTACAGTG
Serratia proteamaculans 568	Spro_0186	-56	4.4	CTCTGTATAAATTCCCAGTG
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4179	-71	4.5	ATCTGTATAAATCACCAGTG
Edwardsiella tarda EIB202	ETAE_0126	-65	5	TTCTGTATAAATCTCCAGTA
Proteus mirabilis HI4320	PMI3340	-47	5.1	TTCTGTATATATCCACAGTA
Photorhabdus luminescens subsp. laumondii TTO1	plu4636	-55	5	TTCTGTATAAAAACACAGCA

Position: -97 Score: 5.3 Sequence: AGCTGGTTTTATATCCAGTA Locus tag: YpesF_010100017464
	YpesF_010100017464	-97	5.3	AGCTGGTTTTATATCCAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrB
Ortholog function: Excinuclease ABC subunit B
Escherichia coli str. K-12 substr. MG1655	b0779	-94	5.6	AACTGTTTTTTTATCCAGTA
Salmonella typhimurium LT2	STM0798	-93	5.6	TACTGTTTTTTCATCCAGTA
Citrobacter koseri ATCC BAA-895	CKO_02348	-93	5.4	CACTGTTTTTTCATCCAGTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00804	-95	5.7	CACTGTTTAAATATCCAGTA
Enterobacter sp. 638	Ent638_1271	-95	5.4	CACTGGATTTACATCCAGTA
Erwinia amylovora ATCC 49946	EAM_1216	-96	4.7	AGCTGTGATTATATCCAGTG
Yersinia pestis KIM	y3026	-97	5.3	AGCTGGTTTTATATCCAGTA
Serratia proteamaculans 568	Spro_1317	-130	5.3	AGCTGGTTTTATATCCAGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2820	-232	5.6	TgCTGTtTtTATATcCAGTA
Edwardsiella tarda EIB202	ETAE_2547	-106	5.2	AGCTGGGTAAATATCCAGTA
Proteus mirabilis HI4320	PMI0607	-51	5.3	AGCTGGATTTTTATCCAGTA
Photorhabdus luminescens subsp. laumondii TTO1	plu1491	-56	5.3	AGCTGGTTTTATATCCAGTA

Position: -41 Score: 6.1 Sequence: TACTGTATAAATAAACAGTA Locus tag: YpesF_010100019541
	YpesF_010100019541	-41	6.1	TACTGTATAAATAAACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dinI
Ortholog function: DNA damage-inducible protein
Escherichia coli str. K-12 substr. MG1655	b1061	-39	5.6	ACCTGTATAAATAACCAGTA
Salmonella typhimurium LT2	STM1162	-39	6.1	AACTGTATATATATCCAGTA
Citrobacter koseri ATCC BAA-895	CKO_02002	-39	5.9	AACTGTATAAATACACAGTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01073	-39	5.9	TACTGTATAAATAACCAGTA
Enterobacter sp. 638	Ent638_1575	-39	5.8	GACTGTATAAATAAACAGTA
Erwinia amylovora ATCC 49946	EAM_1429	-38	5.8	AACTGTATATATTTACAGTT
Yersinia pestis KIM	y1747	-41	6.1	TACTGTATAAATAAACAGTA
Serratia proteamaculans 568	Spro_1895	-39	6	AACTGTATAAATATCCAGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1786	-38	5.9	AACTGTATAAATAAACAGTT
Edwardsiella tarda EIB202	ETAE_2072	-42	5.7	AGCTGTATATATTTACAGTA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of LexA regulog to Yersinia pestis FV-1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --